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LotjaGi1g1v0375200.5

Overview

Field Value
Gene ID LotjaGi1g1v0375200
Transcript ID LotjaGi1g1v0375200.5
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2c, putative; TAIR: AT4G31750.1 HOPW1-1-interacting 2; Swiss-Prot: sp|Q8RXV3|P2C59_ARATH Probable protein phosphatase 2C 59; TrEMBL-Plants: tr|I3SZ64|I3SZ64_MEDTR Uncharacterized protein; Found in the gene: LotjaGi1g1v0375200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:85348117..85351714) extracted from Lotus japonicus Gifu genome v1.2.

ATGGGCTATCTCAATTCAGTTTTGTCATCTTCAAGCCAGGTTCATTCCGCCGATGATGCTCCGGTCAGCGGCGGTGGTCT CAGGTCAACTTTTTTTTCCTTCACAATCCATCTTTCTTTGGATCAATAATTGGGTATTTTCTTAATTATAATCCTTTTTT TTACCTGTTCTTCTGCTTAATTGTTATTGGTTGATTTTATGCATCATGGGTTGTTCTTATTTTCCAATGAAATTTACATA TTTTATTCCTGAACATTTGTGTTAGACTTGGAATTATGATGGATTTACCTTGCAGCAAAATTCTTTCTTCTCCCTTGATT GTTAGCACATAAAAATAGCTATAAGTAAAAGTAAGCATACGCACTTATTCATAAGTTAATTAGAGCAGTTTCTTAAAATA AACTCAAAACAACTTATACGTAGGTAATAAGTTATTCTCACATGTTCACCCAGACACTTGCATAAGTATTTACGCTATAA GATAACCTCAAATAAGTTTTTCAAATGCAGCCCATATCAGTCGCGTAGTTGGGACATAGGTTTGAGGATGCATTTCTTTC ATTGTTAGCAGAGTTAGTTTTGTTCTCCATCTCATGTATGAGCTGTGGATTTTATGCATTACTGATTTGATTAATTGATT AGAAAACAAAGGTGATCTCTCACTTTAATATTGCATTGAAATTTGATGCCGAAAAAGTTGGTGGCATTATTTCCTTTTGG AAAAAAATACTAAAGAATAGGACTACATGAGATGATTGTGACACAATCTGATTTGATTTGTATCTATAGTCACAATGGCA AATTCAGCTATGGGTATGCTAGCTCTGTTGGCAAGAGAGCTTCGATGGAAGATTTTTATGAGACAAGAATTGATGGTGTT GATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGGTATACTTACATCTTTCTCTCATCTCTGTCTCCTGGCTGTACA CTAATTAGAATTATGCACAAATATTTCTTGACTCTGTTTCTTTTCTGGATTTTCCATTTCATAAAATATTGGGAGATTAA TTATTCAATGGAACTTATTGATGCTATATGCAGATGCTTGTGTACTTCTGTACTTGTATTAACAAGCTAGATTTTGCATT TTTGTACTCCATTTTCAGCCTTATCAGCTTTCTGCTTCTATTTTCTCAAATATTCATAAACACAAGGAGGGAATTTTAAA TTTGTGGTCTCATCTCATCTTTGATCCTATCACCCTGATTGTTGATGGTTTTATTAGTCTGTTATGTAAGGGTAATATAT TGTTTTCTGCACACTATGACAGAATTTCTTTGAAAGTTACCAATTTACAGTCATTCTGTCCGCATAATTTCTGGATGCTT CATCTTTCTACTCTTGAACTCAAAGTTGTCTTTGTAGTATTCTTTGTTGTGACATTTGAATCTTCATTTATTTCCTATAT GAGCAAGGTTTTAGTGTAGAGTGTTTCTTTGTTTAGCATGAGAATTTCCCCCCCCCCCTAAAAAGTTTAAGCTTGCAGGA ATGATTTCCTATTGACTATATGTCTATATCTATATATAACCTATGCGTGAACTTGATGTTGATGGTATTCTTATCTGTCC TGAAAAGTAGAAACTTTCTTGTTTTAAACTCTCAGGTCATGGTGGGGCTCGTGCTGCTGAGTATGTGAAGAAAAATCTGT TTAGTAATTTGATCAGTCACCCAAACTTCATTTCTGACACCAAATCTGCAATAGGTATGCTATCTCCTACCTGTCACTTA TACGCCTGATGTTATGCAATTTGTTATTTCCAGAGAATAACGTTTTTTTTCCTTCCAAACATATACTTTTCCACAGCTGA TGCATATAACCATACCGACTCTGAATTTCTGAAATCGGAAAATAGTACTCATAGTAGAGATGCTGGCTCTACTGCTTCCA CTGCCATTCTAGTTGGTGACCGGTTGCTTGTTGCAAATGTTGGGGACTCCAGGGCTGTTATATGCAGGGGCGGTAACGGT AAGGATACTAACTTTATGCACAGATATATGGGCACACACACACACATTCTTAGATGCATGTGGTAAATTATTGATTGTAC TATGATATAATATGACTTGACATAGTTTCTTTTATCATAGAACTGGACCAGAATCAGAAAAATAAATACAGAAAGAACAT GCAGTACGATGTATTATTCAGCTGATTACCCTCTGTAGAATGATTACTAACATTTTCCTTTCAATTGTGGTTTCCTCTAG CAATTGCTGTTTCGCGAGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATG TGGGCTGGTAAATTTATAATACAATTATATTTAATTTAAAATATTTATCTTGTTTGTCACTATTGATAAATGTCTTTTTC AGGAACTTGGAGAGTCGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGCGATAGACTACTGAAGCAATATGTTGTTGCTG ATCCAGAAATCCAGGTCTGCATCTACCATGTTTAGTGACATCCATTCTTAGATATTTCATATTGTTATAGATTCATCTCA ACGTGTGCCTGTATACAGTGCATGGTGTTAATGTACAAGTTCGCATTGTGGGCATTCTAGTTTAAGTGTAGCGTAAATGG AGATAAAAAATGAGCCAAAGACAGAATTCACTTAGTGAATGAATAATAGACAACATAGAAAGAGCTTCTTAGAATGAGGT TATCACTGTTTCTTGAACTCAGAATTGCTATGTCAAAAGAAATGTGAAAAATTTGCATTAACACTTGACCATGCATGCAT TTGTAATTGTTTGCACATTGGTCTGACAATGTTTTGAAATTCCCAAAGTTATGTTATGAAACAGTATGATGAAGCAATAA ATCTTATTTTATTATTTATTCCTAGTCCACAATAACATTATCCAGGAGCATTTTTTGAATTTCTTCTAGTTAAAGACGAT CATGCCACTAACTGACAACAATTGTGTACTATAATGGATGTAAAACAGATGTTGATGTTCTCTGTCTTGATTCTTATTCT GGTTTATGTGAACTCAAATCTTATGTGCTGCCTGCCTCTTCATGTTTGTGGATCTTGCAGGAAGAAAAAGTTGACACTTC TCTTGAGTTTCTTATCTTGGCTAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGTTTGCAATCATGTTAATTTCTTCC CCTTTCTTCTCTCTGATGACTACAACAACACATCTCCATGATAACCACTAAAATTCTGACGAATTAATCTCTGCTGGGAA GAGTTGGGATTGTATAGGATCTCAATGCCATGTGTTGGCTATGTCAATGCCTTCTATATGTGCAAAATACTTTGGTTTCA ATTGCAAAACAAATAAAGGCAAATGCTTTGTCTTATTTTTCTGATTCTTTTAAAACCTTATCCTATTCAGGAAGCTGTTG CTATGATTAAACCGATTGAGGATGCAGAGGAGGCAGCAAAGAGACTGATGCAAGAAGCATATCATAGAGGTAGTGCTGAC AATATCACATGTGTTGTTGTTCGTTTCTCGATGAACAAAGACGTTCCTTCTCAAGGTAGCTCCGAGGTTGTGCATTGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0375200.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGCTATCTCAATTCAGTTTTGTCATCTTCAAGCCAGGTTCATTCCGCCGATGATGCTCCGGTCAGCGGCGGTGGTCT CAGTCACAATGGCAAATTCAGCTATGGGTATGCTAGCTCTGTTGGCAAGAGAGCTTCGATGGAAGATTTTTATGAGACAA GAATTGATGGTGTTGATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGCAATTGCTGTTTCGCGAGATCACAAGCCA GACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTCGGAGGTGT TCTTGCTGTTTCTCGTGCATTTGGCGATAGACTACTGAAGCAATATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAG TTGACACTTCTCTTGAGTTTCTTATCTTGGCTAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATG ATTAAACCGATTGAGGATGCAGAGGAGGCAGCAAAGAGACTGATGCAAGAAGCATATCATAGAGGTAGTGCTGACAATAT CACATGTGTTGTTGTTCGTTTCTCGATGAACAAAGACGTTCCTTCTCAAGGTAGCTCCGAGGTTGTGCATTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0375200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGYLNSVLSSSSQVHSADDAPVSGGGLSHNGKFSYGYASSVGKRASMEDFYETRIDGVDGEIVGLFGVFDAIAVSRDHKP DQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDTSLEFLILASDGLWDVVSNEEAVAM IKPIEDAEEAAKRLMQEAYHRGSADNITCVVVRFSMNKDVPSQGSSEVVH
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF686
1 70 70 2.2E-108 –
ProSiteProfiles
PS51746
1 194 194 31.402
IPR001932
PANTHER
PTHR13832
1 70 70 2.2E-108
IPR015655
SMART
SM00332
24 192 169 4.0E-31
IPR001932
Gene3D
G3DSA:3.60.40.10
69 208 140 1.7E-51
IPR036457
CDD
cd00143
70 194 125 1.54454E-51
IPR001932
PANTHER
PTHR13832:SF686
71 199 129 2.2E-108 –
PANTHER
PTHR13832
71 199 129 2.2E-108
IPR015655
SUPERFAMILY
SSF81606
71 195 125 1.14E-42
IPR036457
Pfam
PF00481
72 187 116 9.1E-41
IPR001932

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0375200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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