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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0375200 |
| Transcript ID | LotjaGi1g1v0375200.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2c, putative; TAIR: AT4G31750.1 HOPW1-1-interacting 2; Swiss-Prot: sp|Q8RXV3|P2C59_ARATH Probable protein phosphatase 2C 59; TrEMBL-Plants: tr|A0A0R4J346|A0A0R4J346_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0375200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:85348117..85351714) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGCTATCTCAATTCAGTTTTGTCATCTTCAAGCCAGGTTCATTCCGCCGATGATGCTCCGGTCAGCGGCGGTGGTCT CAGGTCAACTTTTTTTTCCTTCACAATCCATCTTTCTTTGGATCAATAATTGGGTATTTTCTTAATTATAATCCTTTTTT TTACCTGTTCTTCTGCTTAATTGTTATTGGTTGATTTTATGCATCATGGGTTGTTCTTATTTTCCAATGAAATTTACATA TTTTATTCCTGAACATTTGTGTTAGACTTGGAATTATGATGGATTTACCTTGCAGCAAAATTCTTTCTTCTCCCTTGATT GTTAGCACATAAAAATAGCTATAAGTAAAAGTAAGCATACGCACTTATTCATAAGTTAATTAGAGCAGTTTCTTAAAATA AACTCAAAACAACTTATACGTAGGTAATAAGTTATTCTCACATGTTCACCCAGACACTTGCATAAGTATTTACGCTATAA GATAACCTCAAATAAGTTTTTCAAATGCAGCCCATATCAGTCGCGTAGTTGGGACATAGGTTTGAGGATGCATTTCTTTC ATTGTTAGCAGAGTTAGTTTTGTTCTCCATCTCATGTATGAGCTGTGGATTTTATGCATTACTGATTTGATTAATTGATT AGAAAACAAAGGTGATCTCTCACTTTAATATTGCATTGAAATTTGATGCCGAAAAAGTTGGTGGCATTATTTCCTTTTGG AAAAAAATACTAAAGAATAGGACTACATGAGATGATTGTGACACAATCTGATTTGATTTGTATCTATAGTCACAATGGCA AATTCAGCTATGGGTATGCTAGCTCTGTTGGCAAGAGAGCTTCGATGGAAGATTTTTATGAGACAAGAATTGATGGTGTT GATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGGTATACTTACATCTTTCTCTCATCTCTGTCTCCTGGCTGTACA CTAATTAGAATTATGCACAAATATTTCTTGACTCTGTTTCTTTTCTGGATTTTCCATTTCATAAAATATTGGGAGATTAA TTATTCAATGGAACTTATTGATGCTATATGCAGATGCTTGTGTACTTCTGTACTTGTATTAACAAGCTAGATTTTGCATT TTTGTACTCCATTTTCAGCCTTATCAGCTTTCTGCTTCTATTTTCTCAAATATTCATAAACACAAGGAGGGAATTTTAAA TTTGTGGTCTCATCTCATCTTTGATCCTATCACCCTGATTGTTGATGGTTTTATTAGTCTGTTATGTAAGGGTAATATAT TGTTTTCTGCACACTATGACAGAATTTCTTTGAAAGTTACCAATTTACAGTCATTCTGTCCGCATAATTTCTGGATGCTT CATCTTTCTACTCTTGAACTCAAAGTTGTCTTTGTAGTATTCTTTGTTGTGACATTTGAATCTTCATTTATTTCCTATAT GAGCAAGGTTTTAGTGTAGAGTGTTTCTTTGTTTAGCATGAGAATTTCCCCCCCCCCCTAAAAAGTTTAAGCTTGCAGGA ATGATTTCCTATTGACTATATGTCTATATCTATATATAACCTATGCGTGAACTTGATGTTGATGGTATTCTTATCTGTCC TGAAAAGTAGAAACTTTCTTGTTTTAAACTCTCAGGTCATGGTGGGGCTCGTGCTGCTGAGTATGTGAAGAAAAATCTGT TTAGTAATTTGATCAGTCACCCAAACTTCATTTCTGACACCAAATCTGCAATAGGTATGCTATCTCCTACCTGTCACTTA TACGCCTGATGTTATGCAATTTGTTATTTCCAGAGAATAACGTTTTTTTTCCTTCCAAACATATACTTTTCCACAGCTGA TGCATATAACCATACCGACTCTGAATTTCTGAAATCGGAAAATAGTACTCATAGTAGAGATGCTGGCTCTACTGCTTCCA CTGCCATTCTAGTTGGTGACCGGTTGCTTGTTGCAAATGTTGGGGACTCCAGGGCTGTTATATGCAGGGGCGGTAACGGT AAGGATACTAACTTTATGCACAGATATATGGGCACACACACACACATTCTTAGATGCATGTGGTAAATTATTGATTGTAC TATGATATAATATGACTTGACATAGTTTCTTTTATCATAGAACTGGACCAGAATCAGAAAAATAAATACAGAAAGAACAT GCAGTACGATGTATTATTCAGCTGATTACCCTCTGTAGAATGATTACTAACATTTTCCTTTCAATTGTGGTTTCCTCTAG CAATTGCTGTTTCGCGAGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATG TGGGCTGGTAAATTTATAATACAATTATATTTAATTTAAAATATTTATCTTGTTTGTCACTATTGATAAATGTCTTTTTC AGGAACTTGGAGAGTCGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGCGATAGACTACTGAAGCAATATGTTGTTGCTG ATCCAGAAATCCAGGTCTGCATCTACCATGTTTAGTGACATCCATTCTTAGATATTTCATATTGTTATAGATTCATCTCA ACGTGTGCCTGTATACAGTGCATGGTGTTAATGTACAAGTTCGCATTGTGGGCATTCTAGTTTAAGTGTAGCGTAAATGG AGATAAAAAATGAGCCAAAGACAGAATTCACTTAGTGAATGAATAATAGACAACATAGAAAGAGCTTCTTAGAATGAGGT TATCACTGTTTCTTGAACTCAGAATTGCTATGTCAAAAGAAATGTGAAAAATTTGCATTAACACTTGACCATGCATGCAT TTGTAATTGTTTGCACATTGGTCTGACAATGTTTTGAAATTCCCAAAGTTATGTTATGAAACAGTATGATGAAGCAATAA ATCTTATTTTATTATTTATTCCTAGTCCACAATAACATTATCCAGGAGCATTTTTTGAATTTCTTCTAGTTAAAGACGAT CATGCCACTAACTGACAACAATTGTGTACTATAATGGATGTAAAACAGATGTTGATGTTCTCTGTCTTGATTCTTATTCT GGTTTATGTGAACTCAAATCTTATGTGCTGCCTGCCTCTTCATGTTTGTGGATCTTGCAGGAAGAAAAAGTTGACACTTC TCTTGAGTTTCTTATCTTGGCTAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGTTTGCAATCATGTTAATTTCTTCC CCTTTCTTCTCTCTGATGACTACAACAACACATCTCCATGATAACCACTAAAATTCTGACGAATTAATCTCTGCTGGGAA GAGTTGGGATTGTATAGGATCTCAATGCCATGTGTTGGCTATGTCAATGCCTTCTATATGTGCAAAATACTTTGGTTTCA ATTGCAAAACAAATAAAGGCAAATGCTTTGTCTTATTTTTCTGATTCTTTTAAAACCTTATCCTATTCAGGAAGCTGTTG CTATGATTAAACCGATTGAGGATGCAGAGGAGGCAGCAAAGAGACTGATGCAAGAAGCATATCATAGAGGTAGTGCTGAC AATATCACATGTGTTGTTGTTCGTTTCTCGATGAACAAAGACGTTCCTTCTCAAGGTAGCTCCGAGGTTGTGCATTGA
CDS sequence (LotjaGi1g1v0375200.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTATCTCAATTCAGTTTTGTCATCTTCAAGCCAGGTTCATTCCGCCGATGATGCTCCGGTCAGCGGCGGTGGTCT CAGTCACAATGGCAAATTCAGCTATGGGTATGCTAGCTCTGTTGGCAAGAGAGCTTCGATGGAAGATTTTTATGAGACAA GAATTGATGGTGTTGATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGCTGATGCATATAACCATACCGACTCTGAA TTTCTGAAATCGGAAAATAGTACTCATAGTAGAGATGCTGGCTCTACTGCTTCCACTGCCATTCTAGTTGGTGACCGGTT GCTTGTTGCAAATGTTGGGGACTCCAGGGCTGTTATATGCAGGGGCGGTAACGCAATTGCTGTTTCGCGAGATCACAAGC CAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTCGGAGGT GTTCTTGCTGTTTCTCGTGCATTTGGCGATAGACTACTGAAGCAATATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAA AGTTGACACTTCTCTTGAGTTTCTTATCTTGGCTAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTA TGATTAAACCGATTGAGGATGCAGAGGAGGCAGCAAAGAGACTGATGCAAGAAGCATATCATAGAGGTAGTGCTGACAAT ATCACATGTGTTGTTGTTCGTTTCTCGATGAACAAAGACGTTCCTTCTCAAGGTAGCTCCGAGGTTGTGCATTGA
Protein sequence (LotjaGi1g1v0375200.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGYLNSVLSSSSQVHSADDAPVSGGGLSHNGKFSYGYASSVGKRASMEDFYETRIDGVDGEIVGLFGVFDADAYNHTDSE FLKSENSTHSRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGG VLAVSRAFGDRLLKQYVVADPEIQEEKVDTSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMQEAYHRGSADN ITCVVVRFSMNKDVPSQGSSEVVH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 70 | 70 | 5.1E-143 | – | |
| PANTHER | 1 | 70 | 70 | 5.1E-143 | ||
| SMART | 24 | 246 | 223 | 9.3E-68 | ||
| SUPERFAMILY | 29 | 249 | 221 | 5.75E-66 | ||
| Gene3D | 30 | 257 | 228 | 1.7E-70 | ||
| CDD | 33 | 248 | 216 | 1.53693E-76 | ||
| ProSiteProfiles | 34 | 248 | 215 | 46.952 | ||
| PANTHER | 71 | 252 | 182 | 5.1E-143 | ||
| PANTHER | 71 | 252 | 182 | 5.1E-143 | – | |
| Pfam | 72 | 241 | 170 | 1.8E-59 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi1g1v0375200.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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