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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0377800 |
| Transcript ID | LotjaGi1g1v0377800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TAIR: AT4G31805.1 WRKY family transcription factor; Swiss-Prot: sp|Q6NQ99|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr|I1JU66|I1JU66_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0377800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:85744279..85747393) extracted from Lotus japonicus Gifu genome v1.2.
AGAGGGAGAAGAAAAGAAGGACCCACGTTTTCCCTCCAAAATCCAAAACAGTCTCTCTCTTCTCTCCTTCCTCCCTGAGT GCCCTTCGAAATTGAACCCATCATTTTCAGCAACGAATTCAATGCTCTCTCTCTCTTCTGTGCCGTGCGCTTTCTGCAAT CAACGATGAAACCCCTCTCCTATAAATCCCCCAATCTCACTCTCCCTCACTCTCACTCCCACTCCGCCCATCGCCGCCGC TTACGAATCGCCGATATCCTCCTCTCCGACGAAGATTTCATGGACGGCGTCCAAAAAACGCCGCCCTCGCCGAGAAGCCG CTACTCGCCTCGCCGGCTCGTTGCTTGGTTGCTGGCGGCGCTCAAACCAACCAAACACCACCGACGCTGCCTAAGCAACG CCACCGATTCAGAGACGCCGTCGTCGTCGCCGATCACCAACGATCTAACACCAGGTACCGATGAATCGAGTCAGAACCTC TAATTTGCAATTTGATGCCTAATTTCTGCAATTTATGCTTGATTGATTTCATTGCAATGATGAATTTCTGTTCATAATTT GGCTGTTAGGTTTATGATCTTGTTGTTGATATTCTGCAGGAGAGTTACAATTGAACGATGCATCGTTCAAGGTAGGAGTT GGTTGTGGATTGATGTATCTGATTGCAGCGAGTAAGAACGAGTTTGGGAAGATGGTTGAGTTGCGGAAAGAAATGGAAAT GCTCCTTCAAAACGTGAAAGGAGAGTTAGAAAGTAAAGGCGGCGGCGCGATTCTTAAGCCATTCAAACAAAGTGATGATG GTGGTGGTGGTGGTGGAGCCTTTGCCTGTTCCATTACTGATGTTCCTGAATTTTGTTCTAGCTCTAACAGCCATTTGTCA GTTCACTCGCGGAAACCGCGTGCTCAGCTGGAGAGTAAAAGCAATATGGTTCGTAACCGGTTTCTGGATTATGGGGTGAG TGAACATGATGAGTATGCTGGAGAAATTACTGAGCTTCAGGAGGAATTTGAATTTGAGTTACAACGGTTGCAGCTGTATT TGGATGGAGAAGCTGCATTTGAAGATGCACAAGGAGGAAGAGTTGAGGTAGATTAGTTCATAGCTTGACTTGCCATGATT ATATTTATATCTGTTTTCTGATTTTTGTTGATGATGAACATTGAGCAACTTTATATCGGGATGACTCAACCATGGAACAA CTTGTTTGGATATGGGGTGAGACCAAAATCATGATGGACAGTTGCAAAAGGTAAAGATAGCTGCTCTGTCCACCGTGATT TTAGTTTCACCGTAATTTTCCACTGTGTAATCGTGTATCATATCAGAAACTATGTCAATTTTGTCTGTGGTTTGTTGTGT CACTGAGGGATGTCAACCAATTTACACTTAGGAAACTAATATGTATGTCAGTATGTGTTAAGGATATAAGTTGAGGATAA CATGAATGAATTTCAGTTCAATCTAGAAGTGCATGTTTTCATTGAGAGTTAAAGTGATTTTTCAATCTAGAAGTGCATGT TTTCAAGATGTTAAAAGCTAAACAATTTACTGGATCAGAGGAAAGTCTTATTTTCTTACTTTTTCATTGAACTCAATAAT TTTTCAAACATATAGTCCACTTTTTATCTTGAAGTGCAAGTGAATGTTTGTTTGCACTGATTCAACCAATTTACACTTAG GAAACTAATATGTATGTGTTAAGGATAGGAGTTGTGTTAAGGATAGGAGTTGAGTATAACATTAATGAACTTTCAGTTCA ATTTAGAAGTGCATGTTTTCTTTGAGAGTTAAAGTGATTTTTCACCTGTTTCAAAAATTTCAAGATGTTAAAAGCTACTG TAAACAAATTACTGGATAAGAGAGAAGTCTTTTTGCTCATTTTTTCATTGAACTCAACAATTTTTCAAACATATAGTCCA CTTTTTATCTTGAAGTGCAAGTGAATGTTTGTTTTCACTAATTTAAACTAATAACCTAACATACCCTTATGTGGTTACCT AACTGGTTAGTATACAATCTGGTGTGAATTTCTACTTTTTAAATATTTTTCCACAGATACTATTAGATACATGACTTTTC AAATTTCAATTTGGGAATAGTCTCTCCAATCAGTTGAAAGGCAACATCTAGATGTTTCAATGTAATGCCCTTTGGTTACC AAGAGCTGCTTCTAGAAAAGGAGGCTACCAATGGGCCATGGTAGATGTGGATTATGAAATATGTATTATTACTTTGCAAC TATATGCTGCTTTTCCTTCACTTCTTGTGTTATTGATTCTATCTAATCTAACCATTCTTTGTCTGTTGTTGGTAAACTTA TCTGATTATACTGTGTTTAATCTGTAATCTTATTCTTGGCTGTTATGACATTCTAGAATGGTTTGCAAATTGGCAGGTAA ATGTTAAAGACTCTTGTTCTGAAAGCAATAGCTCAAGTTTCGGTGAAATAACAATGGAGCCTCAGGTAGCAAGTTATGAT GTATCATTTGGAGTCCCTCCAGTTGAACTAGAGAGAAGGTTGCATGAACTACTTGAAACAAGACTGCATGAACACATAAC AGAGCTGGAGTCTAAATTAGAATGTACCACGCAGAAGCTTGATGAGAAAGAGTTAGAGGTTACTTGGTGGAAAGACACTG CTCGACTCATCGCACTACATGTTCCAGAAACTTATCGATTTACTTTCCAACTTGATCCTGACACTGATTTGAAGTTGAGA CAAGTTGTAGGGTAGCTTTTGAATAATGTGAAACTGATTAATGGCATGTTGCTTGAACAGATCTTTTTTCTCAAGTTTTT GGTTTAGTCCTCTCCATTAAAGGGTTGGGAGGATAATGTCCAATAGGTTTTGCAATGAACTAATGATCAATGAGACTATA GAAAACGAAAGAGTCAAAATAGCCTTTAAAATTGTAGAGTGGTACTCATGATGTGTGAAAGTGATTGTTCTGTTGTGGAG CTTTTTTGAGATTATTCTAAAGAGTAAAATACACTCCCCTCCCTTGAGGTTTGCCAATATGACACTCAGCCCCATTCTTA ATTAAAATCCACACTCCACCCCACCAACTCCACCAAGTTAACTACATCTTAAAAGATGCTCACGGAATATTCTTT
CDS sequence (LotjaGi1g1v0377800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACCCCTCTCCTATAAATCCCCCAATCTCACTCTCCCTCACTCTCACTCCCACTCCGCCCATCGCCGCCGCTTACG AATCGCCGATATCCTCCTCTCCGACGAAGATTTCATGGACGGCGTCCAAAAAACGCCGCCCTCGCCGAGAAGCCGCTACT CGCCTCGCCGGCTCGTTGCTTGGTTGCTGGCGGCGCTCAAACCAACCAAACACCACCGACGCTGCCTAAGCAACGCCACC GATTCAGAGACGCCGTCGTCGTCGCCGATCACCAACGATCTAACACCAGGAGAGTTACAATTGAACGATGCATCGTTCAA GGTAGGAGTTGGTTGTGGATTGATGTATCTGATTGCAGCGAGTAAGAACGAGTTTGGGAAGATGGTTGAGTTGCGGAAAG AAATGGAAATGCTCCTTCAAAACGTGAAAGGAGAGTTAGAAAGTAAAGGCGGCGGCGCGATTCTTAAGCCATTCAAACAA AGTGATGATGGTGGTGGTGGTGGTGGAGCCTTTGCCTGTTCCATTACTGATGTTCCTGAATTTTGTTCTAGCTCTAACAG CCATTTGTCAGTTCACTCGCGGAAACCGCGTGCTCAGCTGGAGAGTAAAAGCAATATGGTTCGTAACCGGTTTCTGGATT ATGGGGTGAGTGAACATGATGAGTATGCTGGAGAAATTACTGAGCTTCAGGAGGAATTTGAATTTGAGTTACAACGGTTG CAGCTGTATTTGGATGGAGAAGCTGCATTTGAAGATGCACAAGGAGGAAGAGTTGAGGTAAATGTTAAAGACTCTTGTTC TGAAAGCAATAGCTCAAGTTTCGGTGAAATAACAATGGAGCCTCAGGTAGCAAGTTATGATGTATCATTTGGAGTCCCTC CAGTTGAACTAGAGAGAAGGTTGCATGAACTACTTGAAACAAGACTGCATGAACACATAACAGAGCTGGAGTCTAAATTA GAATGTACCACGCAGAAGCTTGATGAGAAAGAGTTAGAGGTTACTTGGTGGAAAGACACTGCTCGACTCATCGCACTACA TGTTCCAGAAACTTATCGATTTACTTTCCAACTTGATCCTGACACTGATTTGAAGTTGAGACAAGTTGTAGGGTAG
Protein sequence (LotjaGi1g1v0377800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKPLSYKSPNLTLPHSHSHSAHRRRLRIADILLSDEDFMDGVQKTPPSPRSRYSPRRLVAWLLAALKPTKHHRRCLSNAT DSETPSSSPITNDLTPGELQLNDASFKVGVGCGLMYLIAASKNEFGKMVELRKEMEMLLQNVKGELESKGGGAILKPFKQ SDDGGGGGGAFACSITDVPEFCSSSNSHLSVHSRKPRAQLESKSNMVRNRFLDYGVSEHDEYAGEITELQEEFEFELQRL QLYLDGEAAFEDAQGGRVEVNVKDSCSESNSSSFGEITMEPQVASYDVSFGVPPVELERRLHELLETRLHEHITELESKL ECTTQKLDEKELEVTWWKDTARLIALHVPETYRFTFQLDPDTDLKLRQVVG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | - | – | |
| PANTHER | 7 | 357 | 351 | 6.1E-94 | – | |
| PANTHER | 7 | 357 | 351 | 6.1E-94 | ||
| MobiDBLite | 75 | 96 | 22 | - | – | |
| MobiDBLite | 79 | 96 | 18 | - | – | |
| Coils | 128 | 148 | 21 | - | – | |
| Coils | 313 | 333 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Asymmetric cell division | The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity. |
Expression pattern of LotjaGi1g1v0377800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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