Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR33476

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0008356 View details of GO:0008356 AmiGO InterPro QuickGO	Biological process	Asymmetric cell division	The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity.	Subterm of GO:0051301

Associated Lotus transcripts 13

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1815500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein POLAR [Arabidopsis thaliana] gi\|18417879\|ref\|NP_567883.1\|	Domains Coil PTHR33476 PTHR33476:SF6 mobidb-lite	5
Lj1g3v4579170.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein POLAR [Arabidopsis thaliana] gi\|18417879\|ref\|NP_567883.1\|	Domains Coil NON_CYTOPLASMIC_DOMAIN PTHR33476 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE mobidb-lite	12
Lj4g3v1719740.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_014264 [Theobroma cacao] gi\|508774818\|gb\|EOY22074.1\|	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR33476 PTHR33476:SF7 SignalP-noTM_EUK TRANSMEMBRANE	8
Lj4g3v1719740.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_014264 [Theobroma cacao] gi\|508774818\|gb\|EOY22074.1\|	Domains CYTOPLASMIC_DOMAIN Coil NON_CYTOPLASMIC_DOMAIN PTHR33476 PTHR33476:SF7 TRANSMEMBRANE	7
Lj5g3v0626540.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Os02g0795200 [Oryza sativa Japonica Group] gi\|115449207\|ref\|NP_001048383.1\|	Domains Coil NON_CYTOPLASMIC_DOMAIN PTHR33476 PTHR33476:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK mobidb-lite	12
LotjaGi1g1v0213300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Non-structural glycoprotein 4; TAIR: AT5G61040.1 hypothetical protein; Swiss-Prot: sp\|Q6NQ99\|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr\|A0A0B2Q9A9\|A0A0B2Q9A9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0213300	Domains Coil IPR040348 NON_CYTOPLASMIC_DOMAIN PTHR33476 PTHR33476:SF23 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION	9
LotjaGi1g1v0377800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TAIR: AT4G31805.1 WRKY family transcription factor; Swiss-Prot: sp\|Q6NQ99\|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr\|I1JU66\|I1JU66_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0377800	Domains Coil IPR040348 PTHR33476 PTHR33476:SF22 mobidb-lite	5
LotjaGi1g1v0693100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; TAIR: AT3G09730.3 POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; Swiss-Prot: sp\|Q6NQ99\|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr\|K7LZM2\|K7LZM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0693100	Domains Coil IPR040348 NON_CYTOPLASMIC_DOMAIN PTHR33476 PTHR33476:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM mobidb-lite	12
LotjaGi1g1v0693100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; TAIR: AT3G09730.3 POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; Swiss-Prot: sp\|Q6NQ99\|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr\|K7LZM2\|K7LZM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0693100	Domains Coil IPR040348 NON_CYTOPLASMIC_DOMAIN PTHR33476 PTHR33476:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM mobidb-lite	12
LotjaGi4g1v0254800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TAIR: AT5G61040.1 hypothetical protein; Swiss-Prot: sp\|Q6NQ99\|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr\|K7KME8\|K7KME8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0254800	Domains CYTOPLASMIC_DOMAIN Coil IPR040348 NON_CYTOPLASMIC_DOMAIN PTHR33476 PTHR33476:SF23 SignalP-noTM TRANSMEMBRANE mobidb-lite	9
LotjaGi4g1v0255000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Formate hydrogenlyase subunit 5; TAIR: AT5G61040.1 hypothetical protein; Swiss-Prot: sp\|Q03AP9\|RNY_LACC3 Ribonuclease Y; TrEMBL-Plants: tr\|K7KME8\|K7KME8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0255000_LC	Domains CYTOPLASMIC_DOMAIN Coil IPR040348 NON_CYTOPLASMIC_DOMAIN PTHR33476 PTHR33476:SF23 TRANSMEMBRANE	7
LotjaGi5g1v0076100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; TAIR: AT3G09730.3 POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; Swiss-Prot: sp\|Q6NQ99\|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr\|A0A0B2SNY0\|A0A0B2SNY0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0076100	Domains Coil IPR040348 NON_CYTOPLASMIC_DOMAIN PTHR33476 PTHR33476:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM mobidb-lite	12
LotjaGi5g1v0076100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; TAIR: AT3G09730.1 POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; Swiss-Prot: sp\|Q6NQ99\|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr\|A0A0B2SNY0\|A0A0B2SNY0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0076100	Domains Coil IPR040348 NON_CYTOPLASMIC_DOMAIN PTHR33476 PTHR33476:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM mobidb-lite	12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	7.69