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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0385000 |
| Transcript ID | LotjaGi1g1v0385000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleotide/sugar transporter family protein; TAIR: AT4G32390.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390; TrEMBL-Plants: tr|I1JUD7|I1JUD7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0385000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:86891670..86896161) extracted from Lotus japonicus Gifu genome v1.2.
CTCACCTTTTATTACTTGAATTATCATTTAGGCACACAACCGAGTCCTTACTAATAATAACCCACCTCAAATTGGTTGGG TATGATAACATTTGTCTAGTACCTAAAGTCCTAGTATAATTTTAATGTATATTTTAAGAAGTATCCTCCCCTAGTTGTTA TTTTCCTCACTCACTCATTCATTCATTCACTCTCACTCACTCTCATCCACACTTGTCTCTTTCCCTATCTATCTCTCACC TGACCCTTTCTTCTTCATCTTTCTTTCCGGCGGTGGTTGTCACGGTGGTTCCGCCAACAACAACAATGGGGAAAGGTGGA TCTCTAAGCGACGGCGTAGTGAAGAAGATCGTCCTCTCCTACACCTACGTAGCCATATGGATCTTCCTCTCCTTCACCGT AATCGTCTACAACAAATACATCCTCGACAAGAAGATGTACAATTGGCCATTCCCAATCTCCCTCACCATGATCCACATGT CCTTCTGCGCCTCCCTCGCCTTCTTCCTCGTCCGCGTCCTCCGCCTCGTCGAACCCGTCTCCATGTCTCGCGACGTCTAC CTCTCCTCCGTCGTCCCCATCGGCGCTCTCTACTCCCTCTCCCTCTGGCTCTCCAACTCCGCCTACATCTACCTCTCCGT CTCCTTCATCCAAATGCTCAAAGCCCTCATGCCCGTCGCTGTTTACTCCATCGGCGTCCTCCTCCGCAAAGAATCCTACA AAAACGACACCATGTGTAACATGCTCTCCATCTCCGCCGGCGTCGCCGTCGCCGCCTACGGCGAAGCCCGTTTCGATACA TGGGGTGTCCTCCTCCAGCTCGGCGCCGTCGCGTTTGAAGCCACCAGGCTTGTCCTCATCCAAATCCTCCTCACCTCCAA AGGGATCTCGCTCAACCCCATCACATCACTCTACTACGTCGCTCCCTGCTGCTTGGTCTTCCTCTCTGTGCCATGGATCT TCGTTGAATACCCTGTTCTGAAAGAAACCTCGAGCTTCCATTTCGATTTCGTCATCTTCGGTACCAATTCGCTCTGCGCT TTTGCGTTGAATCTGGCGGTGTTTCTTCTGGTTGGGAAAACTTCTGCTCTGACGATGAATGTGGCTGGGGTTGTGAAGGA TTGGCTGTTGATCGCGTTCTCTTGGTCTGTCATCAAGGATACTGTGACACCCATCAATTTGTTTGGGTATGGGCTTGCTT TTCTGGGTGTGGCGTATTACAATCATTCCAAGTTGCAGGCTATGAAGGCCAAGGAATCGCAGAAGAAAATTGCACAGGCT GATGATGAGGAATCAGGAAGGTTGCTTGAGAACAACAGAGATGGTGAAGGCAAGAGGAATGAGCAGCAGAATTGATTTTG ACTTGAATCTGATTTGATGTATGAACTAATAAAACAAGGAGGAAGAACAATCTGGAGAAGCTAAATGGAATTTACATCCT TTGGGCATGTTGCTGATTAGGAGTTGCTACTAGAGTAAGAGTCTCAGGTTCTTTACTTTGTCATCATTTTTCCATTTCCC CTTTTTTTGTTGCTTAGTTCTATCTATGTCATTGTAGGAACTCTCAATCTATTGAGTTTTAATTTTCAAATGCTTTATTT ATTCAGATTATGTTTCTTTTCTGTGTTGTTACTTGCTTCTGGTATTGTGAATTTGGGGTTTCTCTTGTGATGTAGCTAAG GTATCCTATTAAGGTTTAGATCAGTCGGTAGATAGTTGAGCTCCTTCAGCATCTAGTCTAGGTTTGATCCCTGGGCGGTG CGTATGGAGAATGGAGAATGGTTTGTTGGGAGAGACATATCCACTCATGACTGCCGACCGTGGGATACTTAAGGAAGAAA CAAAAAAAACTAGGGTATCCATGGTGTTAAAGGCAATGCAGCTAAATCTTTGGTAATGTATGTTAAAATTTGACTATCAC TCTAAATAGATGAATTATTCTGGTCTGGTTGTATAATGTTGAAAAGTGGTAGGCAGCTTGTTAGAGTATCAATCACTAGA TGTAATGGTTTGACTCTGATGAGATCTTGAATGGATGGGGCCAACTGATTCCTTGCTGGCTGGAAATATAATACTCATAA TCTAAAGATTGTTCAACAAACTGAAAAAGACTAGTTACTTTTCTATAATGAATAATAATAGTGTTTGAACAGTTAAATAT TGTCAATGTTCACACAGTGTGATCTAGCTAAGTTTGCCCTGTGTCTAAATAGTAAATTCTATCATCTGATTGAGAATAAA AACACACTAGTAGTTTTTGCCCTTCCTTATGTGTGGCATCAGCAATCGGCAATGTGAGTGAATGAGAAAGATAGTAGCAC CGATTGAGAATAAAAACACACCAGTAGTTTTTGCCCTTCCTTATTGCTTGTCTCTTTGAATTGATTTCTAGCTGATAGGA AGATCACAGTTTTGTTGTTTAACTAAATTTTACCAGTCACCGCACTAATGTGATTTCTAGTGAACATTCATTCATGATCC CAGTAGATGGAAAATTAATTTAGCCTGCAGTTGAGAGCTTTTTACTTTATTGCTGAAAAGGATTGTTACCTTTTATGGGA AAAAAGGCACATCCCCCCCCCCCCTATCAGACGTGTCTAAAGGGAAGGAAACATCATTGAATTCATTTCTGTGGTAGCCA TATGCATATGCTGCTATAGTACCAATTCACCTAGGAGTATACGTCATAGGCACTGTCCTGTTAGCATGGGTTTGATCACC GACAAATAGATACATGGTTGCAATTCAGTTCCATGTGAACTCTGTTGTATTCTAGTTTGCTTGTACCAACTTTTGTGCAT CCTACTTGTTAATTATGGTTTATCAGCTAATCCTACTTAATGCAGTATTACTATTTATCATATTTTGACCAAGTTAATTG ATTTGGTTTCTGCATTTCCTGTATATAATGAAAATGTTCAAGTGTGGTTTGTTAGAAACTAAATAGATGCTAAAGTATAT AGCTAAAGCCAAAATTAGAAGTCTTTTTGTCTTTCTTCATCTGGATCATGTTCTTATAATCAATACACTTTGGCGTGTGA ATGTTGTCTTCCATGTTCTTTTACTCAAGTGGCTTCAATTAGCTTGCCACTTTCATTTGGAACAAACTTCCTTCTACAAA TAGATTTAAAAAACCCAAACCACCACCATTGAATACAGAAATTACAAACGGTTTTTTACTCATGAAGAATGCATGTGTGT TTGAATATCAGTTGAACTCAATGCCATTCACGTTGAAGCTAAAGTGACAAAATTCTACATCGTTTTATGTGTTGGTATGT GTGTTTTTCTTTTGTATTAGACAAAAGGAAAACCAAACTCACATTTCATCATGGCTTGATGACTTGCATTACATTGATGT AAAGTGGAGTTTTTTTTTACTTCTTAGCTTGCCTCTATTCATTTGCATTATTGCCCTATTTTCTGCTCCTTTCTCCATTC CTGCCTCCACTTAACGCTTTCGATAATAACAAATTTCACTGCAATGAACATGAGACAGCGTTGTGATACTCCATGATTTC CTTTCTGGTAAGGTAAACAGAGAGAAGACGTATAAATAAGAACAATATTTTGTCTTATTTCTGGCATTTCCGTACACTGA AAATAATGCAGATGTTGGTGCTGATATAAATAATGGTTGGAATGGCAAGGAATTGTGTGGATAATGCTACTTTAATTTCG TGCTATGCACGGGTTTGTCAATTCTTAAGTATTTATCCAAGTTTATTTTGTAAACAATCTGTATTTCTAGTGTTTAAATT AGTTCTGCAAAATTTAGTCTTAACTAATTTCAAACTAGAATGATATTCATTCTATTATTTTTTTTGACAATGATATTGAT ACACAACATAAAAAAAGTGATATTTTGTACATAAGCTTACCAATATCACATGATGATCGAAAGGCATCTTATAAGTAACC AATTACTTAATTTACAAAATCTCTTCTTGCATGATGCTACTCAAGTCTCCCAAAAAAGAATGTAACCATTCTTTATCTTA CTTCCTCAATTCACAGTAAAAAAAGTGGTCATTGAATCATTAACCGATCCGATTCAACCACCAAACATATAGATCAACTG ATATAGGATTGTTCACCTCCCGCACTCTATAAAGAAACCTGACCGAGCTATCTTAGGAAAATAGTGGAACTACACTCTGT AAGAACTAGATTACTGGTGATGATTTATAAACAATTTATTGGGGTAGTGCATTCAACTTTGTGCACTATGCTAATGCTAT GTATAGTTTTCCCTTTAAACAAGGCTCTTCACTCTTTTTATGAAGAGAATGTTAAACGTGAGGATTAGTTTGATAATACA CATTGAATCTAGCATTATGGTGCATAAAATATTAACAAAGAATTGGGGAAAACAAATCATATTCCTGCCTGGTGCCGCAT ATGTTAATGCTATACATTGAGTTACTTTTTTGCCGCCTCTACTTTTTTTCATATAGCAATGAGGCTGTTCCAATGTGCTT ACTTAGCACCAT
CDS sequence (LotjaGi1g1v0385000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAAGGTGGATCTCTAAGCGACGGCGTAGTGAAGAAGATCGTCCTCTCCTACACCTACGTAGCCATATGGATCTT CCTCTCCTTCACCGTAATCGTCTACAACAAATACATCCTCGACAAGAAGATGTACAATTGGCCATTCCCAATCTCCCTCA CCATGATCCACATGTCCTTCTGCGCCTCCCTCGCCTTCTTCCTCGTCCGCGTCCTCCGCCTCGTCGAACCCGTCTCCATG TCTCGCGACGTCTACCTCTCCTCCGTCGTCCCCATCGGCGCTCTCTACTCCCTCTCCCTCTGGCTCTCCAACTCCGCCTA CATCTACCTCTCCGTCTCCTTCATCCAAATGCTCAAAGCCCTCATGCCCGTCGCTGTTTACTCCATCGGCGTCCTCCTCC GCAAAGAATCCTACAAAAACGACACCATGTGTAACATGCTCTCCATCTCCGCCGGCGTCGCCGTCGCCGCCTACGGCGAA GCCCGTTTCGATACATGGGGTGTCCTCCTCCAGCTCGGCGCCGTCGCGTTTGAAGCCACCAGGCTTGTCCTCATCCAAAT CCTCCTCACCTCCAAAGGGATCTCGCTCAACCCCATCACATCACTCTACTACGTCGCTCCCTGCTGCTTGGTCTTCCTCT CTGTGCCATGGATCTTCGTTGAATACCCTGTTCTGAAAGAAACCTCGAGCTTCCATTTCGATTTCGTCATCTTCGGTACC AATTCGCTCTGCGCTTTTGCGTTGAATCTGGCGGTGTTTCTTCTGGTTGGGAAAACTTCTGCTCTGACGATGAATGTGGC TGGGGTTGTGAAGGATTGGCTGTTGATCGCGTTCTCTTGGTCTGTCATCAAGGATACTGTGACACCCATCAATTTGTTTG GGTATGGGCTTGCTTTTCTGGGTGTGGCGTATTACAATCATTCCAAGTTGCAGGCTATGAAGGCCAAGGAATCGCAGAAG AAAATTGCACAGGCTGATGATGAGGAATCAGGAAGGTTGCTTGAGAACAACAGAGATGGTGAAGGCAAGAGGAATGAGCA GCAGAATTGA
Protein sequence (LotjaGi1g1v0385000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKGGSLSDGVVKKIVLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCASLAFFLVRVLRLVEPVSM SRDVYLSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLRKESYKNDTMCNMLSISAGVAVAAYGE ARFDTWGVLLQLGAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCLVFLSVPWIFVEYPVLKETSSFHFDFVIFGT NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQAMKAKESQK KIAQADDEESGRLLENNRDGEGKRNEQQN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | - | – | |
| PANTHER | 4 | 337 | 334 | 4.1E-211 | ||
| PANTHER | 4 | 337 | 334 | 4.1E-211 | – | |
| TMHMM | 15 | 34 | 20 | - | – | |
| Phobius | 16 | 35 | 20 | - | – | |
| Pfam | 20 | 306 | 287 | 8.6E-24 | ||
| Phobius | 36 | 46 | 11 | - | – | |
| TMHMM | 47 | 69 | 23 | - | – | |
| Phobius | 47 | 72 | 26 | - | – | |
| SUPERFAMILY | 64 | 160 | 97 | 3.53E-5 | – | |
| Phobius | 73 | 83 | 11 | - | – | |
| TMHMM | 84 | 103 | 20 | - | – | |
| Phobius | 84 | 102 | 19 | - | – | |
| Phobius | 103 | 107 | 5 | - | – | |
| Phobius | 108 | 130 | 23 | - | – | |
| TMHMM | 110 | 132 | 23 | - | – | |
| Phobius | 131 | 141 | 11 | - | – | |
| Phobius | 142 | 159 | 18 | - | – | |
| Phobius | 160 | 164 | 5 | - | – | |
| Phobius | 165 | 189 | 25 | - | – | |
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 190 | 200 | 11 | - | – | |
| Phobius | 201 | 219 | 19 | - | – | |
| TMHMM | 201 | 220 | 20 | - | – | |
| Phobius | 220 | 230 | 11 | - | – | |
| Phobius | 231 | 255 | 25 | - | – | |
| TMHMM | 235 | 257 | 23 | - | – | |
| Phobius | 256 | 261 | 6 | - | – | |
| Phobius | 262 | 283 | 22 | - | – | |
| TMHMM | 264 | 283 | 20 | - | – | |
| Phobius | 284 | 288 | 5 | - | – | |
| TMHMM | 287 | 306 | 20 | - | – | |
| Phobius | 289 | 306 | 18 | - | – | |
| Phobius | 307 | 349 | 43 | - | – | |
| MobiDBLite | 321 | 349 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0385000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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