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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0387700 |
| Transcript ID | LotjaGi1g1v0387700.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatase 2C family protein; TAIR: AT2G25620.1 DNA-binding protein phosphatase 1; Swiss-Prot: sp|Q9SLA1|P2C22_ARATH Probable protein phosphatase 2C 22; TrEMBL-Plants: tr|I3SSZ7|I3SSZ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0387700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:87093757..87095102) extracted from Lotus japonicus Gifu genome v1.2.
TCCTGTTGTGCTATTATTTTCTATCCTCCCCCTTTTAACTCTTATTTTCTGCATGCCTGATGGTGTATGTTTTATTGTTT TTTGCTAATCTTTGTTCATATGCTAATCTTCTCTGGTAGCCGTGTGTTGCTTTACCTGTTGTGTGGACCAATGTGTCTAA ACACATTTTAGACATACCATTGCTAGTGGTAGTGCTTTTAGAGCTGACAGGAACGGAGAAGTTTGTGTATGTTGCTTGCA TTTGTTTGTAAACTGCTTGCAAAAGTTAATTAACATCATATGGCCAATGGCTTGGTCAGGTGTTTGATGGACATGGTGGA AAGCATGCTGCTGACTTTGCTTGTCATCATTTGCCAAAGTTCATTCTTGAGGATGAAGGTTTCCCAAGAGATATTGAAAG GATTATTGCTTCTGCCTTTATGCAAACCGACAATGCCTTTGCAGAAGCATGTTCTCTGGATGCTGCCCTTGCATCTGGCA CCACTGCATTGGCTACTCTTGTTATAGGAAGGTCAGGGTTTTGATATTCAATAGTATGTTTGTACATCATTTTTTTTACC CATAGTGCCAAATGTTTGTCAATTATTCTTCTTTGAGCCAGTTTCCACCCTTTTTTAGTAAGTACAAAAGCCAGAAATCA TTGGAATGAGGTTAAGAGCATTTTGGCCTAGACAGAAAATGACCCACATCCATGCTCCTCCTTTTCCAAAACAATACTGA CATGACATCAGTTTTAAGTACCTTTGGTAAGTTGCTTGTTGATTGTAGTTTCTGATTGCAGGTTGCTAGTGGTGGCAAAT GCTGGAGATTGTCGAGCAGTGCTGTGTCGTCGAGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCAATCTGCAGCAA AGAAAAGAAGCGTATTGAGGGATCTGGTGGCTATGTCTATGATGGATATCTTAATGGGCAACTTAATGTTGCTCGTGCTA TTGGTGACTGGCACATGGAAGGAATGAAAAGCAAAGATGGTGGACCACTCAGTGCAGAACCTGAACTCATGACTACCAAA CTCACTGCTGAGGATGAATTTCTCATCATAGGTTGTGATGGGATTTGGGATGTATTTAGGAGCCAAAATGCTGTCGATTT TGCTCGGCGCAGGCTTCAGGAGCACAACGACCCAGCCTTGTGCAGTAAGGATCTGATTGATGAGGCATTAAAGAGAAAGA GCGGAGACAATTTATCTGCTGTTGTGGTTTGCTTCCATCAACAGCCACCACCTAACTTGGTCGCACCACGCTCTAGGGTG CACCGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTCCTGGACAGCTTGGGTAATTGA
CDS sequence (LotjaGi1g1v0387700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAACCGACAATGCCTTTGCAGAAGCATGTTCTCTGGATGCTGCCCTTGCATCTGGCACCACTGCATTGGCTACTCT TGTTATAGGAAGGTTGCTAGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGTCGTCGAGGAAAAGCAATTGAAA TGTCAAGAGATCATAAACCAATCTGCAGCAAAGAAAAGAAGCGTATTGAGGGATCTGGTGGCTATGTCTATGATGGATAT CTTAATGGGCAACTTAATGTTGCTCGTGCTATTGGTGACTGGCACATGGAAGGAATGAAAAGCAAAGATGGTGGACCACT CAGTGCAGAACCTGAACTCATGACTACCAAACTCACTGCTGAGGATGAATTTCTCATCATAGGTTGTGATGGGATTTGGG ATGTATTTAGGAGCCAAAATGCTGTCGATTTTGCTCGGCGCAGGCTTCAGGAGCACAACGACCCAGCCTTGTGCAGTAAG GATCTGATTGATGAGGCATTAAAGAGAAAGAGCGGAGACAATTTATCTGCTGTTGTGGTTTGCTTCCATCAACAGCCACC ACCTAACTTGGTCGCACCACGCTCTAGGGTGCACCGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTCCTGG ACAGCTTGGGTAATTGA
Protein sequence (LotjaGi1g1v0387700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQTDNAFAEACSLDAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPICSKEKKRIEGSGGYVYDGY LNGQLNVARAIGDWHMEGMKSKDGGPLSAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPALCSK DLIDEALKRKSGDNLSAVVVCFHQQPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 199 | 199 | 1.1E-118 | – | |
| SMART | 1 | 180 | 180 | 1.5E-34 | ||
| ProSiteProfiles | 1 | 182 | 182 | 37.912 | ||
| PANTHER | 1 | 199 | 199 | 1.1E-118 | ||
| Gene3D | 1 | 187 | 187 | 4.5E-62 | ||
| CDD | 2 | 182 | 181 | 2.59827E-67 | ||
| SUPERFAMILY | 4 | 184 | 181 | 2.35E-54 | ||
| Pfam | 11 | 174 | 164 | 8.2E-56 | ||
| TMHMM | 15 | 37 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi1g1v0387700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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