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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0392700 |
| Transcript ID | LotjaGi1g1v0392700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT4G31350.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q12564|CHSA_AMPQU Chitin synthase A; TrEMBL-Plants: tr|G7JCC4|G7JCC4_MEDTR Core-2/I-branching enzyme; Found in the gene: LotjaGi1g1v0392700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:87711905..87720364) extracted from Lotus japonicus Gifu genome v1.2.
CAATGATGGTGTAAGTTGACAGCAATAGAGGGTGGTGGTGATGGTGACTTATACATCACAACCTTATCATGCCTTATCCA TCACTCACATGATGGATTAAATAATACGTCATTTTAACGTATAAGGGGACTTTGATGGATAAGCTTATACAATACAATGT CATCACCAAACAATGGATAAACTCATAATGTATTGTATAAGCTTATACTATCATGCCTAATACGGCGTGCCAAACGAGCC CATAGTCTAGAAACATCAGTACATGAGTACAGTTCATCACAATTTACACACACACACGGCCTCATGTATTGTGTACACCT GTTTGAATACAATTTACAATTCATGCTTTTTATTTGTAAACTGGTTTTTTACAATCGAGCCCATTGTAGCTCGATTTTCG CCCACAATCACACACATGACACATTGACACACCAGCAAAATCCCAATTTTTTACAAGCTGAGAAGTGAAATGGGAGCAAA TCAGAGTCAGAGGACACAGATTAAGAAATTTTACCTGCTTCTGCTTGGTGGAGGGAGCAATTGAGAACAGAGACGTTACA GAGGTGAACTGGTGAAGCCGTGCGTGAAGCGTTGAAGGAAGAGGTGAAGCCGTGCGTGAGCAAGAGCAAGTGAAAGACTA GGGTATCAGAATTTTTTTTATGAAGTAGTCCCTGAATTTTTCCCTTACCTTTACATTTGCCCTTTTTTTGTTTTTTTTTG GGCCCAAATTATGATCTGGGCCAAAGAATTTTTTTTTTTTTTTTTGCCAGAGCCTGGGCACAGGCCCAGGATGGCCAGGC GGTACATCCGCCTCTGGATAAAAGGATGACGTAAATGGGTTTATTATTATTTCTAACATGTATGTTGCTCTCACGAACCC AACAAAGTTGCATCTCACGGTGATTGAAACTTGGAAGCTGGTTGCGCCCCACAATGGATGGAAGTTGGTTGCATGACGTG AACAATATGAGAGTACGAGGAGCACTTTGCGATTTAGATAGTAGATGAATTTTAGGTATTTCTGATAGATTTTGTGAGGG AGATTATTTCCTTTGAGAGTTGTGAGTTGTTCGCTGGGAATTTGATCTCCAAACATATGAGATTTGGTATATCATGAGGT TGTTTGTGCGTCAGATTATAGGGAAGTCGTTGATGTTCTCACTAATGACATAGACATGCATGGATAATGATTAACGGAGA AGATAGTCACAATTCAAGTTTTTTCAGTCCACTCCGAATCTTCTTTTGTGCTAGGTCCTTCTTGTCTAATTTTTTATTAT TTTATTTAGAAGCCCGAAAGTTCTATTTGGGCCTATTAATCCAAGCCCAATTCCGGGAAAAAAGGAACAGTTGACAAATT AATTTTGTTTGGCAGAGCGCTGTAGTTGTTTCTAGAGAATTCGGCAACCTTCGCGTGATCGCTCGCAGATTAATATTTCC ATCCTGGCATTGCATTTGCTTGTGAAGCAGCGAGTGTGGTGATCGAGAAGAAGAAGAAGGAAGATGTCAGCGTACGACGG CGTTGTGGTTGGGAAATTGAAGCTCAAGGGAAAACCATTGGATGTCAAATCCACTATCACTGGTGGGATCACAAAGCACA ACAAAAAGTAGAAGAAGAAGAAGAAGAAGATGGACGATTACAACTCTTACCAGCATCACCATGAAGATGAGGCTGATAAG TATGAGGACAAAGGAAATGATATATCAAATGATGATCATCTAACTTCCGCTGAGAGGCGATTTCTGCAGCAGACAGAGAA ACTTGAGCTTCAAAGGCTAGCAAAGATGGCAAGAAGCTCCCATCGAGATAGGATTCAGCACTTCAATCAGTATTTGGCCA ATCTTAGTGAGCATTATGATATTCCAAAAGTGGGGCCTGGCTAACCCAATTACTTCTGTTTCATGTATTGTAGTACTGTT AAATTCACATAACTTTAATGATCAATTGACATGGATTTGTTTTAGGGAAAATAGCATCTAGCTTTCTTAAATCTTCATTT ACTCACAAGAAATTATCATGACTTATCCAAACTTAATACTCTTAAATTTTTTCAATCAATCTTGGGCTTTTGTTTAACTC AACAACTGGTCAATGTTTCCTACTCTCTCAATCTGTTTAATAATGATGGAAAATTTGTTTAAATATTAAAAACAGAGGAG AATTTTAAAATAAGCTAATTGAAAATATTTTTCTTATGTACAAAGTAGTGCCTAGTATAGATCACAATTTTTTTACTTGT AGATCTCCCCCAGACTTTTTTTGCATATGGGACTCTTGAGTGGGGATTTTTTTTTTCTGTGCTAAAGTTCTCTTGATTTA AAGCTAAAATCAAATATGAGTAGAAACTTACGTTTCGGATCTCTAAAATCGAAAACAATTCTGGCTAGAGAGAAAAATCA GGTGTACATGGAGTGTCATTGTGATTAGGATGTTTATAAGTCGGGAGAAAATAAACTCAAACAAAAATAGCAGAAGAATC AAGAAATTGTTCACTACATGTGAGAGGAATATATTTTATGTGACATGATTCATGATTGTATTAATTTCATACCATCATGC TGGTCCTAGAATATTATTATTTGGCCATTTTATAAACGAGAAATATAAATAATCAATTCACTAATGACAGTTGCATCATC ACTGTGAGAGAGATCAGGAGAATACCTTGGGCGTTTGAGTGAGGTGGCAAGAACTCCTGAATTTGCTGAATTCTCTTCAA TTCTGTTAGCAACCCTGATACTGACAGAGAAACCTATCAGTTTTCACTCTCCAATGAATCTCCACACGCACACACACACT GCATTTTGTTTTTTCATTTTATGAATCACAATGTTCATACAAAAATGTCTGATAAAGGTGCTTAGATAAGAAGAAATCGA TCTTATGATAATGGTAGGGTCAAGAAAGAAATCACAGAGGAGGCCAACTTGGATCATTGTATTCGTTTCTGTGGTATGCC TTATCATGACTTTTGCCTACATTTATCCACAAACGAGCCCTGCAACATGCTACTTCTCTTCCTCTAGAGATTGTCATACA TATGATCCGCACCCCGCTGGCTACTTTTCGCGGAAACTAACTGACGAAGAGGTTGAATCTCGGGTTGTTACCAACGAGTT GCTCAAATTTCTTCCTGTCAAAACCAAGAACCGCAAAGTTGCCTTCATGTTCTTGACTCCGGGTTCACTTCCCTTCGAGA AGCTCTGGCACGTGTTCTTCCAAGTATGTATGGCATTACCAATTCAACAAAGCTCTCAATTTGTTTGTGTCTTCTTTCAC TAGCATGAAAGCTGTCTTTTCTTTTTTTGTTATGTTTTTTCCTGGATTTGTTTATAAATTTATTAGATTACTTAGGTTTC TGGCTTCTTCATTATCTTAATGCAGATAGGATAGGCCTATGTTTGAGTTGCTTCATGTTCTCTTTCAGTTGGAGTGTTAT ACTTGTTACTTTAGGAATGAGACATGCATAGTTGAGCTACCAAAAGGTGGAACATGAGTAATGAAAATGTCTATTTCATA CTATAACATTTATTTTCATAGTGATGAATGGAAAATAGTTTATTCACGCCCCAATTTCACACATTGAGAGAGATAGGATA AGTGAGAGATACAATGAGTGATGTGATGAGAAAAGAAGAGAGATATGAAAAGAAAGCGGGTGGAAATAGGATTGAAGAGA ATGTGATTGTGAATCAAAGTTGGTGACGAATATGACAATATGTACAAGAAACGCTTGCCTTGTAGACAAAAAAGAGGATG GATTGACTGTTGAAACTGCTCACATAGTTGAAATGAATGGTGGATTGAATCTGATTATATTTTCAATCATGCTTTGGAGG AGATCTGTTTGGTTTCCAAGGAAAAAGGAGAATATGAACTAAAAAGAAATGAACAATTGTTGCAAAAGAATAGTTGGGGG AAATGCGGGAGATCACTATTTATTTTATGATTATTTGGAAAAGGAGTCTCCAGATTGCCATTAAGGAGTAAGAGTTGGTG GCTACTGCAGTTCTGTCTAAATTTATGTGGAGTCAGAGGTTCCTTATTTTAGCTATAGATTCTGTGTGAAATTCTCATTT TATGCGTATTAGATATTTATTGATACATAGGAAGGTACAGAGGTCTTGAAGGTCGTCAGTGTTTGCACTGTGACATAGTT ATAAAATAATGACTTAAGAAAAGTCTAGCTGAATTTGACAGGCTTTATAATGCTAAATTGCTAAAAATGGGAACAGACTT TTTTATGAGGGTTGGTACCAAGTTTAGACTATTGTTCATGCTCAATTCCTGAAGCTTGTAGAGTTTATTCTCCTCATGTA TTGTGCTGCATCTGGTTTGAAGAGTACAAAAAAGGATGAGCGTATATATTGTATCACGGTTTTATCTGATAAAAATATAA ACAGATTTCACGTTTGTGATGAATATTTACAGGTCAGGTTGCAGTTTATAAGAAAGTGATTGCAATGTACTACTCTTGTT TAGTCATATTTTCCAACTTAAATTTAATCTGGAGTTATTGCAATTATACAATCAGTACTTATGAAGATGGTTTATTTTGA GAAGATGATAAGAGCCATATTTATGCATTCTTTACTTATAATAACAAAATGCAGGGGCATGAGGGCAGATTCTCAATTTA TGTACATGCATCTAAGGAAAAACCAGTACATGCCAGCCAATATTTTGTTGGTCGAGAAATTCACAGTGAACCGGTATGGG CCTTGTTCACTTGCTTTGGATATTTGAATATCAATATTAATAAGAAAATAATTAGATGATGTAAAAGCATAATGTCTTTA ATTCATAAAAATTTCATCAAAGTTGTGCATCATAATATGATGGTTACATATGTAAATACTATCCTTTGTTCATAAGATGA TGATTGAATCTCTATATGTTGAGAGCACTAATGTATGATTACTTGTTACATAGAATCCATTCATTTTGAGGCATGCCATC TTTCTTAAGGTCTGAAAATTTTGTACAGGTGAGTTGGGGGAGTTTTTCTATGGTTGAGGCAGAAAAGAGACTTTTGGCAC ATGCACTTATAGACCCTGATAATGAACATTTTGTCTTGCTGTCTGAAAGGTCATTCCATTATCTGGTTTTTCTTTAGGTG CAAGATCATGCTTGCTTTGTGGATTTGATCTACTCACATCTTCAAATTTTGTTTCAGTTGTATACCTGTGCGCCCCTTTG AATTCGTGTACAACTACTTATTGTTTACAAATGTCAGCTTCATTGATTGGTAAGGCATTATACACAAAAACTCTTGCTAT TTTGTTGATGAAATCTTTAAAAAAATCTTTCATTAAAATTTCATTGCCCCATATTTATTAGATCGAAATTCTGACTAATT TCCTGATCCCCCTCACCTCAACCATTATAAAAAAAGCTATGTGGATCCTGGACCTCATGGAAATGGAAGGTATATAGAGC ATATGTTGCCTGAAGTAGAAAAGAAGGATTTCAGAAAGGGTTCACAGGTAGCATTAGAAACTTAAGTGTACTCTTATTCT TCAACTCCTTTAGTTTAAAAAATTTATTTCTTTTAAAATGGTGATTTGCAAAGTTGATGGTTTTAGACATCTTCAGAGAC TATTCAAATTAATCTTATTTAGTACTTCAGAATGATTTTTCACTTAGTTTTGAAAGAAAAATATTTCGTGAGCACATCTG TTAGGCTCTTGGTAAATCCTTGTGACTTAGCCTTCTTATTTTCTCATCTAGATTCTCAGGCAGCTGACTAGCAGACTGTC AGCAAATACAAATCGTGCATCTTTGGGTAGGTCTACCTTGTTTGATGGCCCTTGGATGTTACTTTGGTTTTTTTATTTTT ATTTTAGATGAGTGTAGTGTTGGATTTATTTTGAGATTATTGAAAAATATTTACTACATACACATATTGTTTCTTGATGA CTACATGATATGATATATGATACATCTTGGACTTTGGCTAGTAGTAATGTAGTATATACATATTTAAAGGTGTTTTATAA TTTTGGGATGTTGAAATTATTGAATAGTCTCTCTCAAAATTTATGTAAATTTATGAAAGTATAGTTTTTAAAATGCTATT TTATCAAGCATGTTATTGTGATTTAGGATATCATTAGAAAACTTTTGTGGAATTCAGTTGATTTGGATCATGTTTATACT GCAGTGGTTCTCAATGAAGCGTCAACATGCTATTGTAGTTATGGCAGACAGTCTCTATTTTACAAAATTCAAGCATCATT GCAGGGTACTATATTATCTACAATCACTTACTTGATGTGCTTTTTTCTAGTTGGATGGATTATTTGATCCTTTATTCTTC ATATAACCTATCTTAAGAATGTTACTGTTGATATCTGTAGTCATTAGTCAATGAAATAAGAGGTGTAGGTGATTTCTGAA CCACTCTATTAATCAACTAATTGTGTTCAAATTCTTTGCCCTTCTTCTCAGAAAATAAATTATTATTCACTAAAAAGAAT AAAAAAACCTAATTAACTTATCAGAGAAAAAAAAAGACAGGTCGTAATGGAGTAAAAATCTAATTAACTAAAAAAAGGCA TGGATATAGCAGTTATAAACTTACATTGGTGATTATTAAATGACGTGTGACAGTGGGACATGGAATATGCCATCAAACGG AGACAGAAGATTTCTATCCAGCCGTAACAAGCCAATATACTTGATGAAGTTTGCTAATGTTTGTAAAGTTTAAATTTGAC AAGCCTGACTGATATAGATTGCACTTAGCTTGTTTGGTTTTCATATTGGTTTGTCAGTATATGTAGACAGACTTGTAAGA TATTAGTGTAATGTTTGTCAACATTCAACACTGCAGGTTGTAATTTCTCTCTTCTCCTCTGCTTTGTTATGTTTTTTTTC ACTTACATTTTGTTTAGTCAATTTTCTGCTAATTTTGTGTTGGGAAGATTGAATTTGTAAAGATGGTTTAGTCAATTTTC TGCTAATTTTTCCACACTTTGCTCTGTTTTTGGTTCACTGACAAACATCTTGTTGTTCATGTTTTAAACTTCTCTAGCCT AATATGGAGGGAGGACGCAACTGCTATGCTGATGAGCATTACTTGCCAACCTTTTTTAATGTCAGTTTGCGCAAATTCAG CTCTTATAAGTGACAGTGATATGAATTGGTCTCTTTCTTTGCTAACTTTTTTGGTGTATGTTTAGATGATTGACCCAGAA GGGATTTCAAGTTGGTCAGTAACATATGTTGATTGGTCTGAAGGAAAATGGCATCCTAGATCATTCAGTGCTCAGGAGAT TAGTGATAAACTCCTGAAAACCTTAAGAGTATGTGACATAAACTTCACTCTCTACCTTCAGTTAGACTGTTTTTCAGCAA TTATGTGACATAAAATATTTTATTTTGTGTTTTTCCTTATAGGGTAGGGATCTATATGAACTATAATGAAAACTAGATGG AAGAAAACTTCCTGACAAGCAAGTCATAGTAGGGAAATTTTCTTCATTCTAGTTTTTTCTTCTTCTGTTAAGTGTATTGT TAATCTAAATTTATAAGAAAAATTATATCCATTCTTTATCTTAAAGTGTGTGCAAACATCTGTTTGCATTGATGCCAACG GAGATCCAAACATACCCGTAACCGTAACTTCTTTTGATGTTTAGTACAAAAAACTTTTCACCATGCACCTTATTAACTTT TGTTAACTTAAAGACTAATAGAAAATAAGATGAAGAAACAAATTGACTCAAGTATTGAGATTCATTTCTTAAGAATTTAC TCTTTTTATATTTTCTCCAAAGTTTCTTATTATTTTGCAAGGTTCTAAGACAATTTATTGTTTAGAATTTTAGTTATAAT GGCAATTTCATTCATTGCAGTCCAAAGATGAAGTTCCACATATTACAAGCGAGGCACAGGTATAAATTATTCAAAGTCCT TCATATTTTGATATTACTTTTTTTTTTATATACTCAAGGAATTAATTATTATTGGCAATTTTCAATTTCATTTTCCTTGC AGAGATCAGTGATAATTACCCCTTGCATGTGGAATGGGTCAAAACAACCATGTTATTTATTTGCCAGGAAGTTTTACCCA GAAACCTTGGATAAATTGATGCACCTTTTCTCTAATTCTTCTGTATTCTAAAGTGTTGCCAATTCATTATCATTCTTTGG TAATCAAAAGCATATAATCTCCTGCTTCACCTTGAAGATAACATTTGGTTGTGAAAAGATCAACAATCCAGAGGCAAATG GATAAAATTATATAGGAAGGCAAAGAAGTTGATTCATATTTGAAGAGTATTCTTGTCATGGGCTTTGATAAGAATGCTAA GCTTATAACATGGATGGAAAGATCATTTGCAGTTCCTATTTTACTTTGTTATACAATTTTTTAAACATCATAGAATTTCC TGTTAGATGAAAATTTATGGTGTACTTGATTTTACTCATCTGGATGCTGATCTGATTTAA
CDS sequence (LotjaGi1g1v0392700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTTTTGCCTACATTTATCCACAAACGAGCCCTGCAACATGCTACTTCTCTTCCTCTAGAGATTGTCATACATATGA TCCGCACCCCGCTGGCTACTTTTCGCGGAAACTAACTGACGAAGAGGTTGAATCTCGGGTTGTTACCAACGAGTTGCTCA AATTTCTTCCTGTCAAAACCAAGAACCGCAAAGTTGCCTTCATGTTCTTGACTCCGGGTTCACTTCCCTTCGAGAAGCTC TGGCACGTGTTCTTCCAAGGGCATGAGGGCAGATTCTCAATTTATGTACATGCATCTAAGGAAAAACCAGTACATGCCAG CCAATATTTTGTTGGTCGAGAAATTCACAGTGAACCGGTGAGTTGGGGGAGTTTTTCTATGGTTGAGGCAGAAAAGAGAC TTTTGGCACATGCACTTATAGACCCTGATAATGAACATTTTGTCTTGCTGTCTGAAAGTTGTATACCTGTGCGCCCCTTT GAATTCGTGTACAACTACTTATTGTTTACAAATGTCAGCTTCATTGATTGCTATGTGGATCCTGGACCTCATGGAAATGG AAGGTATATAGAGCATATGTTGCCTGAAGTAGAAAAGAAGGATTTCAGAAAGGGTTCACAGTGGTTCTCAATGAAGCGTC AACATGCTATTGTAGTTATGGCAGACAGTCTCTATTTTACAAAATTCAAGCATCATTGCAGGCCTAATATGGAGGGAGGA CGCAACTGCTATGCTGATGAGCATTACTTGCCAACCTTTTTTAATATGATTGACCCAGAAGGGATTTCAAGTTGGTCAGT AACATATGTTGATTGGTCTGAAGGAAAATGGCATCCTAGATCATTCAGTGCTCAGGAGATTAGTGATAAACTCCTGAAAA CCTTAAGATCCAAAGATGAAGTTCCACATATTACAAGCGAGGCACAGAGATCAGTGATAATTACCCCTTGCATGTGGAAT GGGTCAAAACAACCATGTTATTTATTTGCCAGGAAGTTTTACCCAGAAACCTTGGATAAATTGATGCACCTTTTCTCTAA TTCTTCTGTATTCTAA
Protein sequence (LotjaGi1g1v0392700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTFAYIYPQTSPATCYFSSSRDCHTYDPHPAGYFSRKLTDEEVESRVVTNELLKFLPVKTKNRKVAFMFLTPGSLPFEKL WHVFFQGHEGRFSIYVHASKEKPVHASQYFVGREIHSEPVSWGSFSMVEAEKRLLAHALIDPDNEHFVLLSESCIPVRPF EFVYNYLLFTNVSFIDCYVDPGPHGNGRYIEHMLPEVEKKDFRKGSQWFSMKRQHAIVVMADSLYFTKFKHHCRPNMEGG RNCYADEHYLPTFFNMIDPEGISSWSVTYVDWSEGKWHPRSFSAQEISDKLLKTLRSKDEVPHITSEAQRSVIITPCMWN GSKQPCYLFARKFYPETLDKLMHLFSNSSVF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 349 | 347 | 4.1E-187 | – | |
| PANTHER | 3 | 349 | 347 | 4.1E-187 | – | |
| Pfam | 65 | 295 | 231 | 1.1E-75 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi1g1v0392700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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