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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0396200 |
| Transcript ID | LotjaGi1g1v0396200.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UAA transporter; TAIR: AT4G31600.1 UDP-N-acetylglucosamine (UAA) transporter family; Swiss-Prot: sp|Q54YK1|Y8631_DICDI Putative UDP-sugar transporter DDB_G0278631; TrEMBL-Plants: tr|G7J2T9|G7J2T9_MEDTR GDP-mannose transporter GONST3; Found in the gene: LotjaGi1g1v0396200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88233084..88236167) extracted from Lotus japonicus Gifu genome v1.2.
TCTGTTTTGCATGCTTTTCGTTTTCTTAGATTCATCGTGTTCATAGCGCAAGTTTTGGTAGGTCTTGACTTTAGATTTCA TTGGATTCGATCTCAATTTTCGCCATGGAGATCCGTGCCGACGCTGAAACCGGTCCCTATTCAAGGTTTTTCCACATGCT CTCACTCCACTTTGTTGTTTTCACTGAATCCTAAAAATTTGCATTACTCCATGAGATTTTCAATCTTTGTAGCTGTTAAC ATTTGAATTTGAATCACTAGATGTTGCTGTTATTAGCTATGATTCTGTTTGATCGCAGTTTGGTCGCGGCAGTGTCGTAT GGAATCGCTTCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAATATGCACACTCAATGACTCTCCTCACTTT GCAGGTGTTAATTGTTACTATGATGACCATTAATGATTACATATGGTGAATGTTGTTAATAACTGTATCTGTTTTTCTTA GCAATTGGCGACCGCGTTGCTTATACATTTTGGCCGGAGAATGGGATACACAAGAGCTAAAGGAGTGGATATTGCAACAG CTAAGCAGCTGCTTCCGGTTTCGATTTTCTATAACGCTAACGTTGCTTTTGCTTTGGCGAGTTTGAAAGGAGTTAATATC CCAATGTATATTGCTATAAAGAGGCTTACACCGCTTGCTGTGCTTGTTGCTTGGTGTTTCTTAGGAAAGGGGAGGCCTAC AACTCAGGTACTGGTTTTTTATAATGTTCTTATTCAGTTAATTTATTGTTAATGTCAAAACTTTTACTTACTTTGTCACT TTATCAAGATAGTTTATGTATGATAGTTTAATTTATTGATTAAGGGTGCACAAAGATCTAAGAGTGCTCTTAGAAAAAGC ATTTATGGTCTTTGAAGAGGCAGAAGAACCATTGGCTATAGAATTTTATTGATCTTAGTACCATGGTACTGCAGCAACAA AACTTTGATCTTGTTGTGGAAATATTAATCCCAAATGGATTCTAAAATTGGAGATGAAACCTTTTATAACAGTGAACAGG ATCATTATGGTATGTTCATTTATCATACATTGGCATGGAGATCATATTAACCAAATATGTTGGTTTAATTCCAAAATTCT TAAATATCATTCGATTAGCCTTGTGTGCCTACTGCCTGATATGATGATTGGTTGTGTTTTATTCTTTCCCTCTCTTAAGC TGAGAAAGAGGATTTTGATATTTGATTTTCTGTCGTTTGCTTTTATTCTCATCAATTTTGTGTAAAACAGCCATTGTAGT ATCTCAATGTAAATATAAATGTATTTAATGCATTGACTGAACTGCTGAAGTTTTGAATTGGCTACCAATTTTGGTAGTGT TTACACTCAATACGACATTCTATACATTTCTGTCAAATTTCAGGTGACTCTTTCAGTGATACTGATTGCTGCTGGAGTTC TCATAGCAGCCCTTGGAGATTTTTCCTTTGACCTTCTTGGGTATAGCATGGCCTTCATTTCTGTTTTTTTCCAGGTGATA TGCTGATATTTCATTATCCATACTCTTATAATGGAGTAATGGCTCTGTAATTTTGCGCCGGTGCATGCTCTTCTCATCGT GTTGCCTACTCACCTACGCAGACCATGTACCTTGTGCTAGTGGAAAAATCTGGTGCTGAGAATGGTCTTTCATCAGTGGA AATCATGTTTTACAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTTATCATAGCAACCGGGGAATTCCCAAATTCTT TATCCATATTATTTGCAAAGGTCAGAATCTTCATGATTAAGCTACCATAGATTTAATATTTCAGACATTTGGCATCTTTT GTCTTTCATTCTAGAAAGTCCGATAAATTCAATGATTTCAATAGGAACTGCTGAAATGTCAAAAATAGCCTGATCTAGTT ACTATAAGTTTATTTCCAACAGTAAATGATGTTCAGCACTTGTTGATTTCCTTGCAAATTGACTTTCTAAGTTAATGGAC AATTCAAGAAGAATTACATCAGAACCAGCCTTCCCTTCCTCAGTCTGTTAATGTCCATTGAGAAGTTTCATACCAATTTC TAATTATTTGTTCACTCTAGATGCTAGAATATTGCTAGAGCCCAGAAGGTTCATTTCTCTCAAAGCTATCCCTATTCCTT ACTTGAAAGGATTTGTGGAGAATCTGAGTTTGTTGGGATTGGGATTAGGCTAGACGGCTGAGGCTGAGATCACTTTATGT AAGGTGGGTGGGAGCCACTTATATTTTGGCGGAATAAGCTCAGGGGACGTTTACAGTAATAAAACACTTGTCTGTTTATA ATATGCTTTATAAATACAAGTTAAATTAACAGATTAGTTGACTCAGTTTCTTTAGTTCTTCTAAATTAAAGTCCTGGCAA AGTAATTTCTCTAGTGGAAGTAAATGAAGGATCATAGCAACTTAGTTGTGATGGTTGACAAGTGAATCCATAGCTCGCAA CATATTTTTTATAGGCAACACGTTTGCATATATTTGATGCTACCGCATCGCGGGGTCATGTATTATGTAATGATATATTG GTGTGAAATGAAGGCTATTATCTAACGTGAAGTTGATTTTCTTTGCAGAGTTATTCAGTTTCATTTTTGGCGATCCTTAT TCTTTCATTGGTTATGGGCATCGTTCTCAACTACACCATGTTCTTGTGCACTGTTGTTAATTCTGCTCTAACTACAACTA TTGTTGGCGTTCTCAAAGGGGTTGGTTCCACGGTAAGCTAGATCCTGTGTTTGCCATAGATTTTTCTGACGCAGAACAAA AATTTGAATTAAAATTGATTCATATACAATATTCATCCATCTTTTCTAAATGTTTTATTTGACTTGATTTATTTCTAGTT TTAGCTGCAATCATGATCTGTATCTTTTTGCTTCTTCAGACTCTTGGTTTTGTCTTACTGGATGGTGTTCAAGTCCATGC TCTGAATGTGTCTGGATTGGTTATCAATACTGCTGGTGGTGTTTGGTATTCATATGCTAAATATCAGCAGAAAATGAGTA AGACAGTGAAGCTAGTTACAGACGTGGAGGCTCATCGCACATAG
CDS sequence (LotjaGi1g1v0396200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCTGTTTGATCGCAGTTTGGTCGCGGCAGTGTCGTATGGAATCGCTTCAATGGCCATGGTTTTTATCAACAAGGC TGTTCTTATGCAATATGCACACTCAATGACTCTCCTCACTTTGCAGCAATTGGCGACCGCGTTGCTTATACATTTTGGCC GGAGAATGGGATACACAAGAGCTAAAGGAGTGGATATTGCAACAGCTAAGCAGCTGCTTCCGGTTTCGATTTTCTATAAC GCTAACGTTGCTTTTGCTTTGGCGAGTTTGAAAGGAGTTAATATCCCAATGTATATTGCTATAAAGAGGCTTACACCGCT TGCTGTGCTTGTTGCTTGGTGTTTCTTAGGAAAGGGGAGGCCTACAACTCAGGTGACTCTTTCAGTGATACTGATTGCTG CTGGAGTTCTCATAGCAGCCCTTGGAGATTTTTCCTTTGACCTTCTTGGGTATAGCATGGCCTTCATTTCTGTTTTTTTC CAGACCATGTACCTTGTGCTAGTGGAAAAATCTGGTGCTGAGAATGGTCTTTCATCAGTGGAAATCATGTTTTACAACAG CTTTTTATCTCTTCCATTTTTGATGTTTCTTATCATAGCAACCGGGGAATTCCCAAATTCTTTATCCATATTATTTGCAA AGAGTTATTCAGTTTCATTTTTGGCGATCCTTATTCTTTCATTGGTTATGGGCATCGTTCTCAACTACACCATGTTCTTG TGCACTGTTGTTAATTCTGCTCTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGGTTCCACGACTCTTGGTTTTGT CTTACTGGATGGTGTTCAAGTCCATGCTCTGAATGTGTCTGGATTGGTTATCAATACTGCTGGTGGTGTTTGGTATTCAT ATGCTAAATATCAGCAGAAAATGAGTAAGACAGTGAAGCTAGTTACAGACGTGGAGGCTCATCGCACATAG
Protein sequence (LotjaGi1g1v0396200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MILFDRSLVAAVSYGIASMAMVFINKAVLMQYAHSMTLLTLQQLATALLIHFGRRMGYTRAKGVDIATAKQLLPVSIFYN ANVAFALASLKGVNIPMYIAIKRLTPLAVLVAWCFLGKGRPTTQVTLSVILIAAGVLIAALGDFSFDLLGYSMAFISVFF QTMYLVLVEKSGAENGLSSVEIMFYNSFLSLPFLMFLIIATGEFPNSLSILFAKSYSVSFLAILILSLVMGIVLNYTMFL CTVVNSALTTTIVGVLKGVGSTTLGFVLLDGVQVHALNVSGLVINTAGGVWYSYAKYQQKMSKTVKLVTDVEAHRT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 7 | 25 | 19 | - | – | |
| Pfam | 17 | 293 | 277 | 4.0E-15 | ||
| PANTHER | 20 | 303 | 284 | 3.3E-96 | – | |
| PANTHER | 20 | 303 | 284 | 3.3E-96 | – | |
| Phobius | 26 | 30 | 5 | - | – | |
| TMHMM | 29 | 51 | 23 | - | – | |
| Phobius | 31 | 52 | 22 | - | – | |
| Phobius | 53 | 71 | 19 | - | – | |
| TMHMM | 72 | 90 | 19 | - | – | |
| Phobius | 72 | 89 | 18 | - | – | |
| Phobius | 90 | 94 | 5 | - | – | |
| TMHMM | 95 | 117 | 23 | - | – | |
| Phobius | 95 | 116 | 22 | - | – | |
| Phobius | 117 | 124 | 8 | - | – | |
| TMHMM | 124 | 141 | 18 | - | – | |
| Phobius | 125 | 142 | 18 | - | – | |
| Phobius | 143 | 147 | 5 | - | – | |
| TMHMM | 146 | 168 | 23 | - | – | |
| Phobius | 148 | 168 | 21 | - | – | |
| Phobius | 169 | 179 | 11 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 180 | 200 | 21 | - | – | |
| Phobius | 201 | 219 | 19 | - | – | |
| TMHMM | 217 | 239 | 23 | - | – | |
| Phobius | 220 | 240 | 21 | - | – | |
| Phobius | 241 | 246 | 6 | - | – | |
| TMHMM | 246 | 268 | 23 | - | – | |
| Phobius | 247 | 269 | 23 | - | – | |
| Phobius | 270 | 274 | 5 | - | – | |
| TMHMM | 272 | 294 | 23 | - | – | |
| Phobius | 275 | 294 | 20 | - | – | |
| Phobius | 295 | 316 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0396200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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