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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0396200 |
| Transcript ID | LotjaGi1g1v0396200.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UAA transporter; TAIR: AT4G31600.1 UDP-N-acetylglucosamine (UAA) transporter family; Swiss-Prot: sp|Q54YK1|Y8631_DICDI Putative UDP-sugar transporter DDB_G0278631; TrEMBL-Plants: tr|G7J2T9|G7J2T9_MEDTR GDP-mannose transporter GONST3; Found in the gene: LotjaGi1g1v0396200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88233084..88236169) extracted from Lotus japonicus Gifu genome v1.2.
ATTCTGTTTTGCATGCTTTTCGTTTTCTTAGATTCATCGTGTTCATAGCGCAAGTTTTGGTAGGTCTTGACTTTAGATTT CATTGGATTCGATCTCAATTTTCGCCATGGAGATCCGTGCCGACGCTGAAACCGGTCCCTATTCAAGGTTTTTCCACATG CTCTCACTCCACTTTGTTGTTTTCACTGAATCCTAAAAATTTGCATTACTCCATGAGATTTTCAATCTTTGTAGCTGTTA ACATTTGAATTTGAATCACTAGATGTTGCTGTTATTAGCTATGATTCTGTTTGATCGCAGTTTGGTCGCGGCAGTGTCGT ATGGAATCGCTTCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAATATGCACACTCAATGACTCTCCTCACT TTGCAGGTGTTAATTGTTACTATGATGACCATTAATGATTACATATGGTGAATGTTGTTAATAACTGTATCTGTTTTTCT TAGCAATTGGCGACCGCGTTGCTTATACATTTTGGCCGGAGAATGGGATACACAAGAGCTAAAGGAGTGGATATTGCAAC AGCTAAGCAGCTGCTTCCGGTTTCGATTTTCTATAACGCTAACGTTGCTTTTGCTTTGGCGAGTTTGAAAGGAGTTAATA TCCCAATGTATATTGCTATAAAGAGGCTTACACCGCTTGCTGTGCTTGTTGCTTGGTGTTTCTTAGGAAAGGGGAGGCCT ACAACTCAGGTACTGGTTTTTTATAATGTTCTTATTCAGTTAATTTATTGTTAATGTCAAAACTTTTACTTACTTTGTCA CTTTATCAAGATAGTTTATGTATGATAGTTTAATTTATTGATTAAGGGTGCACAAAGATCTAAGAGTGCTCTTAGAAAAA GCATTTATGGTCTTTGAAGAGGCAGAAGAACCATTGGCTATAGAATTTTATTGATCTTAGTACCATGGTACTGCAGCAAC AAAACTTTGATCTTGTTGTGGAAATATTAATCCCAAATGGATTCTAAAATTGGAGATGAAACCTTTTATAACAGTGAACA GGATCATTATGGTATGTTCATTTATCATACATTGGCATGGAGATCATATTAACCAAATATGTTGGTTTAATTCCAAAATT CTTAAATATCATTCGATTAGCCTTGTGTGCCTACTGCCTGATATGATGATTGGTTGTGTTTTATTCTTTCCCTCTCTTAA GCTGAGAAAGAGGATTTTGATATTTGATTTTCTGTCGTTTGCTTTTATTCTCATCAATTTTGTGTAAAACAGCCATTGTA GTATCTCAATGTAAATATAAATGTATTTAATGCATTGACTGAACTGCTGAAGTTTTGAATTGGCTACCAATTTTGGTAGT GTTTACACTCAATACGACATTCTATACATTTCTGTCAAATTTCAGGTGACTCTTTCAGTGATACTGATTGCTGCTGGAGT TCTCATAGCAGCCCTTGGAGATTTTTCCTTTGACCTTCTTGGGTATAGCATGGCCTTCATTTCTGTTTTTTTCCAGGTGA TATGCTGATATTTCATTATCCATACTCTTATAATGGAGTAATGGCTCTGTAATTTTGCGCCGGTGCATGCTCTTCTCATC GTGTTGCCTACTCACCTACGCAGACCATGTACCTTGTGCTAGTGGAAAAATCTGGTGCTGAGAATGGTCTTTCATCAGTG GAAATCATGTTTTACAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTTATCATAGCAACCGGGGAATTCCCAAATTC TTTATCCATATTATTTGCAAAGGTCAGAATCTTCATGATTAAGCTACCATAGATTTAATATTTCAGACATTTGGCATCTT TTGTCTTTCATTCTAGAAAGTCCGATAAATTCAATGATTTCAATAGGAACTGCTGAAATGTCAAAAATAGCCTGATCTAG TTACTATAAGTTTATTTCCAACAGTAAATGATGTTCAGCACTTGTTGATTTCCTTGCAAATTGACTTTCTAAGTTAATGG ACAATTCAAGAAGAATTACATCAGAACCAGCCTTCCCTTCCTCAGTCTGTTAATGTCCATTGAGAAGTTTCATACCAATT TCTAATTATTTGTTCACTCTAGATGCTAGAATATTGCTAGAGCCCAGAAGGTTCATTTCTCTCAAAGCTATCCCTATTCC TTACTTGAAAGGATTTGTGGAGAATCTGAGTTTGTTGGGATTGGGATTAGGCTAGACGGCTGAGGCTGAGATCACTTTAT GTAAGGTGGGTGGGAGCCACTTATATTTTGGCGGAATAAGCTCAGGGGACGTTTACAGTAATAAAACACTTGTCTGTTTA TAATATGCTTTATAAATACAAGTTAAATTAACAGATTAGTTGACTCAGTTTCTTTAGTTCTTCTAAATTAAAGTCCTGGC AAAGTAATTTCTCTAGTGGAAGTAAATGAAGGATCATAGCAACTTAGTTGTGATGGTTGACAAGTGAATCCATAGCTCGC AACATATTTTTTATAGGCAACACGTTTGCATATATTTGATGCTACCGCATCGCGGGGTCATGTATTATGTAATGATATAT TGGTGTGAAATGAAGGCTATTATCTAACGTGAAGTTGATTTTCTTTGCAGAGTTATTCAGTTTCATTTTTGGCGATCCTT ATTCTTTCATTGGTTATGGGCATCGTTCTCAACTACACCATGTTCTTGTGCACTGTTGTTAATTCTGCTCTAACTACAAC TATTGTTGGCGTTCTCAAAGGGGTTGGTTCCACGGTAAGCTAGATCCTGTGTTTGCCATAGATTTTTCTGACGCAGAACA AAAATTTGAATTAAAATTGATTCATATACAATATTCATCCATCTTTTCTAAATGTTTTATTTGACTTGATTTATTTCTAG TTTTAGCTGCAATCATGATCTGTATCTTTTTGCTTCTTCAGACTCTTGGTTTTGTCTTACTGGATGGTGTTCAAGTCCAT GCTCTGAATGTGTCTGGATTGGTTATCAATACTGCTGGTGGTGTTTGGTATTCATATGCTAAATATCAGCAGAAAATGAG TAAGACAGTGAAGCTAGTTACAGACGTGGAGGCTCATCGCACATAG
CDS sequence (LotjaGi1g1v0396200.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATCCGTGCCGACGCTGAAACCGGTCCCTATTCAAGTTTGGTCGCGGCAGTGTCGTATGGAATCGCTTCAATGGC CATGGTTTTTATCAACAAGGCTGTTCTTATGCAATATGCACACTCAATGACTCTCCTCACTTTGCAGCAATTGGCGACCG CGTTGCTTATACATTTTGGCCGGAGAATGGGATACACAAGAGCTAAAGGAGTGGATATTGCAACAGCTAAGCAGCTGCTT CCGGTTTCGATTTTCTATAACGCTAACGTTGCTTTTGCTTTGGCGAGTTTGAAAGGAGTTAATATCCCAATGTATATTGC TATAAAGAGGCTTACACCGCTTGCTGTGCTTGTTGCTTGGTGTTTCTTAGGAAAGGGGAGGCCTACAACTCAGGTGACTC TTTCAGTGATACTGATTGCTGCTGGAGTTCTCATAGCAGCCCTTGGAGATTTTTCCTTTGACCTTCTTGGGTATAGCATG GCCTTCATTTCTGTTTTTTTCCAGACCATGTACCTTGTGCTAGTGGAAAAATCTGGTGCTGAGAATGGTCTTTCATCAGT GGAAATCATGTTTTACAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTTATCATAGCAACCGGGGAATTCCCAAATT CTTTATCCATATTATTTGCAAAGAGTTATTCAGTTTCATTTTTGGCGATCCTTATTCTTTCATTGGTTATGGGCATCGTT CTCAACTACACCATGTTCTTGTGCACTGTTGTTAATTCTGCTCTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGG TTCCACGACTCTTGGTTTTGTCTTACTGGATGGTGTTCAAGTCCATGCTCTGAATGTGTCTGGATTGGTTATCAATACTG CTGGTGGTGTTTGGTATTCATATGCTAAATATCAGCAGAAAATGAGTAAGACAGTGAAGCTAGTTACAGACGTGGAGGCT CATCGCACATAG
Protein sequence (LotjaGi1g1v0396200.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEIRADAETGPYSSLVAAVSYGIASMAMVFINKAVLMQYAHSMTLLTLQQLATALLIHFGRRMGYTRAKGVDIATAKQLL PVSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAWCFLGKGRPTTQVTLSVILIAAGVLIAALGDFSFDLLGYSM AFISVFFQTMYLVLVEKSGAENGLSSVEIMFYNSFLSLPFLMFLIIATGEFPNSLSILFAKSYSVSFLAILILSLVMGIV LNYTMFLCTVVNSALTTTIVGVLKGVGSTTLGFVLLDGVQVHALNVSGLVINTAGGVWYSYAKYQQKMSKTVKLVTDVEA HRT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| TMHMM | 12 | 31 | 20 | - | – | |
| Phobius | 12 | 31 | 20 | - | – | |
| Pfam | 24 | 300 | 277 | 4.3E-15 | ||
| PANTHER | 27 | 310 | 284 | 3.6E-96 | – | |
| PANTHER | 27 | 310 | 284 | 3.6E-96 | – | |
| Phobius | 32 | 36 | 5 | - | – | |
| TMHMM | 36 | 58 | 23 | - | – | |
| Phobius | 37 | 59 | 23 | - | – | |
| Phobius | 60 | 78 | 19 | - | – | |
| TMHMM | 79 | 97 | 19 | - | – | |
| Phobius | 79 | 96 | 18 | - | – | |
| Phobius | 97 | 101 | 5 | - | – | |
| TMHMM | 102 | 124 | 23 | - | – | |
| Phobius | 102 | 123 | 22 | - | – | |
| Phobius | 124 | 131 | 8 | - | – | |
| TMHMM | 131 | 148 | 18 | - | – | |
| Phobius | 132 | 149 | 18 | - | – | |
| Phobius | 150 | 154 | 5 | - | – | |
| TMHMM | 153 | 175 | 23 | - | – | |
| Phobius | 155 | 175 | 21 | - | – | |
| Phobius | 176 | 186 | 11 | - | – | |
| Phobius | 187 | 207 | 21 | - | – | |
| TMHMM | 187 | 209 | 23 | - | – | |
| Phobius | 208 | 226 | 19 | - | – | |
| TMHMM | 224 | 246 | 23 | - | – | |
| Phobius | 227 | 247 | 21 | - | – | |
| Phobius | 248 | 253 | 6 | - | – | |
| TMHMM | 253 | 275 | 23 | - | – | |
| Phobius | 254 | 276 | 23 | - | – | |
| Phobius | 277 | 281 | 5 | - | – | |
| TMHMM | 279 | 301 | 23 | - | – | |
| Phobius | 282 | 301 | 20 | - | – | |
| Phobius | 302 | 323 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0396200.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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