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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0397300 |
| Transcript ID | LotjaGi1g1v0397300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein AIG2; TAIR: AT2G24390.1 AIG2-like (avirulence induced gene) family protein; Swiss-Prot: sp|A8MRP2|AIGLD_ARATH AIG2-like protein D; TrEMBL-Plants: tr|I3T7E7|I3T7E7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:88367099..88369981) extracted from Lotus japonicus Gifu genome v1.2.
GAGAATGAGTTGTTAGAAGCAGAGTGAGTGCTGTGCTGGGAAGTGAAGAGAAGATGACGAGCGTGAAGATGAGTAGTGGA AATCCAGTGAGAATGGGTGGCGATAATCACAACGTCTTCGTCTATGGAAGCCTCTTAGCCGATGAGGTTGTTCGCATTCT CCTGAAGCGTGTTCCTCCATCCACACCCGCAACTCTCCCCGACTAGTCAGTAATCACTCTCTTTCCATTTCCTTCTCTCA ATTCATATCTGATTCCATTTTTTCTCTAACAATCTCACTACTTGTTTTTCAGTCACAGGTTCAAGATCAAAGGTCGCGTT TATCCCGCTATTCTACCAGTCCAGAATAACAACAAAGTTACTGGCAGGGTGGGTGATTCTCTCTATCTAATTGTATACAG ATGGATGCATGTATCTGAATTTTTAGATTTTTCTGTGTTATATAGTTTCCTGTTATTGAATCAAATCTCAAAAGGGTTAT TCAAGCTAGATAAGATGTTTCGATCGACTTATTTTTACTCAGAATCAATTTTGACACTCGGAAGCTAGCTTAAGAATCAA TTATAGAAGGATTTCTAAACATGCTTATAGTGTTTTTTTTTTTTTACTTTTGTTTTTGTTCAGGTCCTTCTTGGTATCTC AGGATTGGAATTAGATATATTAGATGAGTTTGAGGATGTTGAATACACTAGAAGTGATGTGGAGGTTTTCTTGATGGTGA GTCTAACTCAGTAATTTCTTTTTTTTGCTTTCTATTCATTCAAGAGGTAATTGGATAATCCTGCATGCATGGAAGAATTG ACATTAGTGTTGCTAGAAAGATGAAGGCTAATTTGATGTTTAACTCAAATTTTCATGAAAAATGATGGTCATATTGCATT TCACTAAGGCATTATATTCTGTTCTTCCAGAATAGTCCAAAATATAAAGGCTAAAACTAATTCTACAGGATAATTCTGAA AAGATGCAAGTCTACGCCTATGTCTGGAGCAACAAAGATGATCCTGACTTATATGGAGAGTGGGAATTTGAGGTGTGCTT GCCTTTTTTTAATTTATAAAATGATCTTCAAATACATTTATTCTTCTGTTTTCTTCTTCATTATGCTGTGAAAATTGTTT CATTATGCCATCTAACTATGACCCAAGTCCCAAGTCCCAAGTCCCAAGCCTTTGTTGGCTATAAATGTATCATGTTTACA TTATGAAGAGCTTCAGATAAAGGGAAAGGGGGTTAAGTTGGGCAGAGTATCACTAATGACATAGAAATACTGTTAGCCTG TTAGGGTAGGTGGAGGTAGAGAGATTTCCAAATCAGATGTAACTGTTTTGTCTAAAACCTTGTGTAACATGTTGAATAAG CAGTGATACCTAATTATTGAAGTTCCTTGATGAACAAGTAGGAATTGTTATTTGTGCAAACAAATTAAAGGTGGATGACA TTTTATTTGTTTGTACACTGTTGACCAACGTCATCTATGGTTTCCCTTTACTTTCCTCATGTTTCATTTTTGTGGAGATT TTGAAGCTAGTTAATTATTATAGAATTATGACTATGTAAGTACTTGAAACTTCAGGTTCTATTCATGGCTAATAAACATA AATGGAATAGGTTGTTCTGTTCTTCGAGGCTATTGGCTCATTAAAGTAATGCAGCATAAGTTTGATGTTGTGGTTAAGGA GTGAATTAACTTATGGACACAATTTCATTATATTAATGTTAAAACATTCTTCAAGGGTTCATACTTACAAGACTTGCTGC TGATATGGTTACTGACTTTGCATATATATTTGGATATACACTCAATCTTAAATCCCTTTTCCATGCATCCCTCCCTATTC CAGAAGTAAATTCTTATTTTCTTTCTGATATTCTGATTTTTTTATCTGAAAGGAATGGAAACAAGTTCACATGAAAGATT TTGTCAAGATGACCGATGAATTTAAGGAACAGTTGGAATTGCCCGAATCAAAGCCAAGAGTTCAGACGTATGAAACCTTC TACAAGCAGGAAAACGATAAGCCACATGAACCTTGATGCTTATAACTTGTAAAAACTCTGCATTGTGTGCACTGTGCATT GATGTATGATTCAACTAAGAGTCATACTAGTCAGTCACTCTTATACTTTCTCTTAGAATCATTAGTTTGTTGATATAATA AGCATTTCCATGCTATGTATTTTACAATGACAAGGTTTCAGCATATGTATTTATGAGCAAATTCAGATTATTTCCTGAAG CCTCATTTATGACCCCTTCTCCCTAAGCTTTTCTTTAAATGTTTGAGAGAGAAGATGAAATGGAAAAGAGTTGCACATCA ATTGATACATGTTAATTTTTTATTTTCGAAGTTCTAGTGAGAGATACATTGTGTGAAACTCAATAATCCAGCTAGCGTAT CATCCTGAGGGAAATATTTAGGCATGCCATCTTCATTCCATCAATTTTGCTTATATACTTCATCCCCTATTTCCATCACT AACCAACCATCCATGGCTTTGCTTCTGTTATTAAGATGGGAGTTAAAAATAGAAATCTATCATAAATTTCATGGATGGGA TTGAATGCTGACAACTTAAAATCTGGTAGTCTATAGGTCTAGATGAATTAACTGACCCTTATATAATTCAATAAAGTTTT AAATCTATACTTCAAATCCAAAATGAAGTCATGAAAACATTGTCAATTTCTTTCAACCACCGACAAAAGCAATCACAAAT AAATGTTGGAATAACTGTCTCAGACAGAGCAATAATCCTCTCAGACCTTCAAATATGCAATAAAAGAATGGAAGGCTTCT AAATCCTCTGGATCAGGAGAGCACAAATTATGAATATTTATGGTTTCCAATTCATGTGTCAATTCCATTCTTCTAAAAGC CTC
CDS sequence (LotjaGi1g1v0397300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGAGCGTGAAGATGAGTAGTGGAAATCCAGTGAGAATGGGTGGCGATAATCACAACGTCTTCGTCTATGGAAGCCT CTTAGCCGATGAGGTTGTTCGCATTCTCCTGAAGCGTGTTCCTCCATCCACACCCGCAACTCTCCCCGACTATCACAGGT TCAAGATCAAAGGTCGCGTTTATCCCGCTATTCTACCAGTCCAGAATAACAACAAAGTTACTGGCAGGGTCCTTCTTGGT ATCTCAGGATTGGAATTAGATATATTAGATGAGTTTGAGGATGTTGAATACACTAGAAGTGATGTGGAGGTTTTCTTGAT GGATAATTCTGAAAAGATGCAAGTCTACGCCTATGTCTGGAGCAACAAAGATGATCCTGACTTATATGGAGAGTGGGAAT TTGAGGAATGGAAACAAGTTCACATGAAAGATTTTGTCAAGATGACCGATGAATTTAAGGAACAGTTGGAATTGCCCGAA TCAAAGCCAAGAGTTCAGACGTATGAAACCTTCTACAAGCAGGAAAACGATAAGCCACATGAACCTTGA
Protein sequence (LotjaGi1g1v0397300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSVKMSSGNPVRMGGDNHNVFVYGSLLADEVVRILLKRVPPSTPATLPDYHRFKIKGRVYPAILPVQNNNKVTGRVLLG ISGLELDILDEFEDVEYTRSDVEVFLMDNSEKMQVYAYVWSNKDDPDLYGEWEFEEWKQVHMKDFVKMTDEFKEQLELPE SKPRVQTYETFYKQENDKPHEP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 10 | 126 | 117 | 1.7E-31 | – | |
| PANTHER | 17 | 178 | 162 | 4.2E-61 | – | |
| PANTHER | 17 | 178 | 162 | 4.2E-61 | – | |
| SUPERFAMILY | 19 | 138 | 120 | 3.66E-24 | ||
| Pfam | 21 | 133 | 113 | 2.2E-21 | ||
| CDD | 21 | 120 | 100 | 2.25196E-20 | ||
| MobiDBLite | 159 | 182 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0397300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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