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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0413100 |
| Transcript ID | LotjaGi1g1v0413100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sucrose transporter; TAIR: AT1G09960.1 sucrose transporter 4; Swiss-Prot: sp|Q9FE59|SUC4_ARATH Sucrose transport protein SUC4; TrEMBL-Plants: tr|A0A151TST7|A0A151TST7_CAJCA Sucrose transport protein SUC4; Found in the gene: LotjaGi1g1v0413100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:90458872..90465766) extracted from Lotus japonicus Gifu genome v1.2.
CACATGCACGCCCATGCCACACAGGGGGCACAAGAGTGGCCATGAAAATAACTACCACGGGTGTGGCTTTTGCTCGCCAC AATTCTGGTTCCATTTTTTCTAAGCACGGCCGGGCAATGCTTTGTGAACTCCACAACCTTGCCTTCTCTTCAAATCATAA CCTTTTTCTTTTGCTTTATTGCACGAGTTTTTATTCTCTTTTCCATTTTTTTCCACATATGACCTTCCTATTGCATATTT ACCACACAACACGTGGATTTTGTAAAAAAAATGCAATATTTAGACACAAAATTGTATAAAAATATAGTAACAAATTTACA ATTTAGACACGCATCACCGATCTTAAGTTAAACTAGTTTTTTTTTTTTTTTAAATAATCGCGTTAAAACTTAAAACTAGT TACTTCTCCTTTTATCCAATTGTGTTCTTTTACCCATTTGTCAACTAGCAGGCCCACATTGAGTTTAGTTTTTTTTCTTA GGCCTAGCAAGAAACTTGCACATTGTATTTGGGCTTGGCCCATCCATTTCAAAAACTATAGCCATTAGTTGAGGATGGAT CCATGGATAGATAGCCCATAGATCATAAGACGAGGGCATTTTGGTAATAAAAAAGAAATAACACTGAGTGAACTGCACCG TCACTCCTCACACTCACACTCACACCACACCAGAAGAATGACACTAGGACAACAATACACCATCTCCATCGAACCCGCCA CTTCTCTCTCTAGCTTCTCTCTCTCTCCTCCTGGTCTTCCGTGATGGCCGAAGGAAACGGTCCCATGGAGATTGCAAACA AGCTAGACACTGAAGAAACCATCCCCTCGGCCGAACAACACTACCACTCACAATGGCCAATCCCGACACCACTCACCGCC AACAACAACAACAACAACAACGCAACCGCCGCTCCAAACCCCGACCCAAGCCACGAGCCAGGGTCCCCCTCACTCAGCTC CTCAAAGTCGCATCAGTCGCCGGCGGCATTCAGTTCGGCTGGGCCCTACAGCTCTCCCTCCTCACACCCTACGTGCAGCA GCTCGGGATCCCGCACGCGTGGGCCAGCATCATATGGCTCTGCGGCCCGCTCTCTGGGCTCTTCGTTCAGCCCTTGGTTG GCCACATGAGTGACCGCTGCACCAACCGCTTCGGCCGCCGGAGACCGTTTATTGTGTCCGGAGCTTTGTTTATCATTGTC TCTGTTCTTATTATTGGTCACGCCGCTGACTTGGGGTGGAGGTTTGGTGATACTAAGACTCATCGGCCGGCCGCCGTGGC GTTTTTCGTGTTCGGGTTTTGGATTTTGGATGTGGCTAACAATGTCACTCAAGGTCCTTGTAGAGCTTTGCTTGGTGATC TCACTGGTAAAATTCTCATCCATTTGATGATCTAGACTAATTCAATTTGCAATTATTGTGGTGTATATGAAATCCCTAAT TGATTATTGTGCAACCATGAACCATGACTTTTGTTTTTGGAAATTAGATTACTGTATAGTTCTGGATACTGGATGTTCAG TTGTGCTGTGTGCTGTTGCATTTTCTGTCATTATTGTGAGATGCTATGTTGGTTAACTGCAATCAGTGTTATCAAATAGC GGCTATACGCCGCCGCTATAGCGTAGCTGATTTTTGGCTAATCGCGACGCCGCTATTGCCCACTATAGCGCAATATTCCC GCTATTCGCGGCTAAATAGCGGATTTTTGGCTCACTGCGATCGCGATTTGACAACACTGTCTGCAATTTCCATAAGGGCA TTTCAAGTTTTCAACATCAATTGACTTGTATATGCACTGATAAAGTGCATACACGTGTTTCTCTTAAATTTCTTTGTGCA AAGATGACCTTCAATGATGAGCTGTGAAAAGCAAATGAAGCATTGACGCCTTTCATTTGTTTTTGTTATTTATGTATCTT TTTCTTTGGATGTAAGGCAAGGATGACCGAAGGACACGTGTGGCGAATGCCTATTTCTCCCTATTTATGGCGATTGGTAA TATTCTTGGATATGCAACTGGATCATACAGTGGTTGGTACAAGGTCTTTCCTTTCACGCTTACCCCTGCATGCAATGTTA GTTGTGCGAATCTCAAGTCTGCTTTCTTTCTCGACATTATTTTCATTGTGATCACCACCTATATCAGCACCGTATCAGCC CATGAAGTTCCTTTAAATTCAAGTGGTGCACACCCTGTTGAAGAAGGGGCAGGAGAGTCAGGTAGTGCAGAAGAAGCTTT CCTGTGGGAGATGTTTGGGACATTCAAATATTTTTCAAAACCTATATGGATAATATTGTCTGTTACTGCTCTAACATGGA TTGGGTGGTTTCCATTTCTTCTATTTGATACTGATTGGATGGGCCGGGAGATTTATGGTGGTGAGCCAAATGAAGGCCCT AATTATGATATTGGAGTTAGAATGGGGGCACTTGGTTTAGTGCTTAATTCAGTTGTTCTTGGAATAACATCGCTACTCAT GGAGAGGCTATGCAGGAACCGGGGGGCTGGGTTTGTGTGGGGAGTCTCAAATATCCTAATGGCTGTCTGCTTTGTTGCAA TGCTTGTAGTAACCTATGTGGCAAACTATATTGGCTATGTAGGCAAACATTTACCACCAACTAGCATCGTGATAGCTTCA TTGATGATCTTTACCATTCTTGGGTTTCCCCTGGCAGTAAGTTGCTCTATATACTGCTAAATGCATATTTTCTGTTCATT TTTTTTCTAGCGAAGCCATCCATTTTGTCTCTTATGTTTCCTTAAAATAAACACTCAATGTCATTTTGCACTTCTTTTTG AAGTCTCTAGCTCATACATGTGAAGAATTGACTTGATTTTGGCTTCCTGATCTTCTCTGCTTTTCTCTTTCAAATATCTC GGTGGCTCGTACATGTGAAATGTCTTGACTCTTGAATGAATCTTGTCCTGCATAATCTCCTTGTATCTCAAACTAGCATA TTTCGTGATACCTTTTAGTTTGAGAATCGAGATGTGTCCAAATGAAAAATTGGAAATGCCCCCATCAACTATGCATCATG CATGTGCTGAAAGTGAAATATATGTATATTATTCGAGAGTCCTATGCTTGATTTACACTGACTTCTTATATAAATTATTT CAGATCACTTACAGTGTTCCTTATGCCTTAATATCCACGCATATTCAGCCATTGGGGCTTGGCCAAGGTGGGCAAGAATG ACACCTTATTTATTTTTCTTTCTTGGATATATGATTGTATAACTATTTAAATCAATTGTTGGTACTTTCAGGATTGTCAA TGGGAATCCTAAATCTTGCAATAGTGTTCCCACAGGTATTGCTTCTTTTGAATCCCTTTTCTTTTAACAGTTAAAGTTAA ATTATTAACCCTTTTTTTGGTTGGAAGTGGATGGGGATTTAAAATCCAAATGAAGCTAGATGGATTTATTTACCATTTCA TTAGATGTTTACATGAACTTATTCAACGATAACAATATATTTATCTTGAATTAAATTGCAGAAGTGGCCCTGAATCTTGC ACACTAACTGCACACCACTAGATAAAATTTCATAATTTGAATAATCGATTAATTTAGGTTGAGACAGGTCTTCTGATACT AATACCTTTAGTGGCAATAGGCAGTAAGATTATAGTCTGTGCTCCGGTATTGTGAAGTTGCCTTAACCTAAATATGAAAC ATGACTCTTTGGTTTCTCCCAAGGGATTTTGCCAAGTAAAACTGTAAGTACAGTAGTTTTCACGTTGGGGTGACATTGCT ATCACTTTTGGGATGCTTCTTCGCTAAGAAGCATATAAATTGGCGTGGGAACTTTGACATAAAAAAGCTGAGTGTGTCTT ATTGTGATTTGTGTGTTAGATTATATGTGATTTGATTTTATTTGAGTTTGTGTATATTTGTATTATAGGAAAGTCTAGAG AATTATAGGATAGTAGGATCATACCTTAGAGATTGGTCCTTTTCCTTTTTACCATTTTACCTTAAACACACGCGCGCACG CGCGCACACACCCCAATAGGTCAAAGTAAGTTCTAATAACATATTTAGTTTCTCTAATTTCAAGTTATTATCAGAGCTAT CTGGTTCATGTACGTTAATTTTGTGTTCAGCTGTCATCAAGGAGGCTGACTCCATTTGGCACTCTCTTTGGGAACCCTCT TTCGGCTTGTGGGTCCTTTGTTTGAGACATGTTTTAGTCTCTTTTCATCACTACCATCAATGTTTCTGATAGGTCTTCAT CTGTTAGGCCTAAATCCTAATATAACTCAGGTTTACTCGAGAAGGGCAAAGTAACTACCCGAGTCGGATGTCAGTTGTCA GTATATGTGTATTTGTATATGAGTTTGCAACATAGACTAAGGGTGGATAGTTAGTTAGTAAGGACAATTGTCCTATAAAT AAGAGAAAGGGGAGGTTAGAGAGGTTTTTCTGTTATTCAGCTGTGGAGAGAAAATGGGTCTCTCGAATACTCACCAGATT CATGTATCCGTTTCTAATTCCTATTAGGGATTAGGGTTTATCTTGCATAATAATACTCTCTCTCTCTCTACTTTCTTGGC TGGTTCTATCAATTGGTATCAGAGCTCCATCCTTGGAGCTGTGGGTACCGATCTTGACGATGATTCCAGAATTTGATGAA AGAGGGGCTTATGGATGGCTCATCTGTGAGGCCAAGGGAGTATCCGAAGTGAAGAAATTCTCAGAGGCAGAGAAGGCTTT GATGTGTGATGCGTTCTACAGTCAGCACACTAAGCAGTATTGGGTTGGCCAATGAGTTTTTTCCCATTCACTAGAGTTGG GATTCGAAACCCCCACCAGTTGCTAAAGGGACGAATTGCAGAACCACTACACCAACCCACTTTGTTACTTGTTTTCTTCC ATATCACATTTCAATCAACAGACTGAAGAGAGATAATATAATAGAATTATAATATAAAACCATACACGTGTTTTCACCCA ATAGTTTAAAGCTTCTGGGATAGTTGGTTCATGATATGATATTAGAGCTGCTATGACTAAGTGGTCTGTGCATTGTCCAC ACGTCATGTTCAATGGTCTCTTGTGTGTAGAGGCATATAAGAAACATAATATTAAATCATTTATGTATCTTCACCCAATA GCTTAACCTTGTAGGGTAGTTGGTTCATGAAAAGTATACTGAGATAGCAAATCATAACATTCATGAACATTTTTGTAGTT CTAGTTACTGGAGACTTTTCTTGTTTATACAAAAACCATGTAAGAAAGGATCTTTGTTGTGTGTAAGATTTGCATTTTTG AGCTACTGAATTTATTATTTTTTATTGTTCAAATAGATGGTGGTGTCTTTGGGAAGTGGACCATGGGATCAGCTATTTGG TGGAGGAAACTCTCCAGCCTTTGCTGTGGCAGCTGTTGCAGCCCTCATCAGTGGACTCATAGCTGTCTTGGCCATTCCTC GATCTGGTGGTCAAAGGCCTAGAAGCCAAGTATGAGGTATCATGTTCTTTCTGCTTTTGGCACAGATTTCATTCGAAGAG AGATTAAGAAAATGAACAGGTAGCAAATAATTTGTATATAATTATGTTTTTCTTCTATTTTTTTGACCCTTCCTTTTATC AAGACCCCCCTCCCCCCCACCAATTTTTTAATACAAATAAGTACATTTATGTGTTTTCATCTTATTGGTCATTATTTAAA GCCAATGAGCTAAATTTTGAGTCCTATTATTTTCTGATGTTTTGGTCCGGTTTTTCTATCTCTTATTGGTGATCCTGATG AATGAGTGATCTGTTTAAAACAGTGAGAATGTTATTGTAGGGAATAATGTAAAAGAAGTAATTCATATAGCAGTGCTTTT CCAAACATTCTGGCAACTCAAATGTAATCATAAAAGCTGTCACCATTCTATTGATTGAAAGATTATCTTAAAACAGTGGG GAATTTCTTCATTGTAAATCTGTCCCACCTTCGAAAGACCTTTGTCTCGAAAGACCTTTGTTTTAAAGGCTAAATGCAGT GTAAAAGTTTAGTTGGGGCATCTTTTGTAGGTTCCAAAATTACTCATGGGCAACATCCTTTCCAACCACGGTGAGTTGCT GCTGAATTGGAATTATTCCACATAAAATGTTCTTTTATTTTGAGGCAATGCTGATTATAATGCGTCTGTGCTTCAAGCAT GATGAATATCTTTCCAAAAAAAAGTATGATGTATTAAAATCTTAAAAAAATGTTTCATTTGTTTGTAGTACTAGTATTAG TTTGATGGATGTTCTTAGTGGCCAACATTGAATATGTTAATTGTGCTGGTGGAAAGCTTGATTGAGACACGGTTTTAGTG CTCCTGGGTATAACATTTTTCTTTAAACATAATTCTTGAACGACGGGTTTGATATAATGGTCATTTAATTTATTTTGCTT CTTTTGAACCATGGAATAAATTCCAGTATTAAATACACTTCATTCTTCATGAAAGTCTGATTGGCTTTCAATTCTCAGTA CGATGCCTGTAGGACTCAAAAGAGCATTTAAATATACCAACCTTTATATCATCATTTGTCCTAACTACTAGTGATTCAAT CTACGAACCTCTTGCCAACTTCACAATTGTAATTTACCAGTTTAGCCTGTGAAGTTTGGAGTTAGATTTTGCAGGCTAAT AGTAATAATTTACAGCTCGGGGATTAAGTGTGTTCTATTTGAATACAATGTAAAAGTAATCTTATCTTAATTTATAAGAT GAGTTCTATTTGTTTTTTGTTGTCCGTTTACTCTGATACCAACGGATATTTAAACAAAGTCAAAATTGACTCGTATAGAG AAGAGTAATCAAAATCTAAACAGGGAACCAAAATTAGCGAATCTATTCGAGTTACTGGAACTTGTTGAATAATATTCTGC CTGATCTCCAATGAG
CDS sequence (LotjaGi1g1v0413100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAATCCCGACACCACTCACCGCCAACAACAACAACAACAACAACGCAACCGCCGCTCCAAACCCCGACCCAAGCC ACGAGCCAGGGTCCCCCTCACTCAGCTCCTCAAAGTCGCATCAGTCGCCGGCGGCATTCAGTTCGGCTGGGCCCTACAGC TCTCCCTCCTCACACCCTACGTGCAGCAGCTCGGGATCCCGCACGCGTGGGCCAGCATCATATGGCTCTGCGGCCCGCTC TCTGGGCTCTTCGTTCAGCCCTTGGTTGGCCACATGAGTGACCGCTGCACCAACCGCTTCGGCCGCCGGAGACCGTTTAT TGTGTCCGGAGCTTTGTTTATCATTGTCTCTGTTCTTATTATTGGTCACGCCGCTGACTTGGGGTGGAGGTTTGGTGATA CTAAGACTCATCGGCCGGCCGCCGTGGCGTTTTTCGTGTTCGGGTTTTGGATTTTGGATGTGGCTAACAATGTCACTCAA GGTCCTTGTAGAGCTTTGCTTGGTGATCTCACTGGCAAGGATGACCGAAGGACACGTGTGGCGAATGCCTATTTCTCCCT ATTTATGGCGATTGGTAATATTCTTGGATATGCAACTGGATCATACAGTGGTTGGTACAAGGTCTTTCCTTTCACGCTTA CCCCTGCATGCAATGTTAGTTGTGCGAATCTCAAGTCTGCTTTCTTTCTCGACATTATTTTCATTGTGATCACCACCTAT ATCAGCACCGTATCAGCCCATGAAGTTCCTTTAAATTCAAGTGGTGCACACCCTGTTGAAGAAGGGGCAGGAGAGTCAGG TAGTGCAGAAGAAGCTTTCCTGTGGGAGATGTTTGGGACATTCAAATATTTTTCAAAACCTATATGGATAATATTGTCTG TTACTGCTCTAACATGGATTGGGTGGTTTCCATTTCTTCTATTTGATACTGATTGGATGGGCCGGGAGATTTATGGTGGT GAGCCAAATGAAGGCCCTAATTATGATATTGGAGTTAGAATGGGGGCACTTGGTTTAGTGCTTAATTCAGTTGTTCTTGG AATAACATCGCTACTCATGGAGAGGCTATGCAGGAACCGGGGGGCTGGGTTTGTGTGGGGAGTCTCAAATATCCTAATGG CTGTCTGCTTTGTTGCAATGCTTGTAGTAACCTATGTGGCAAACTATATTGGCTATGTAGGCAAACATTTACCACCAACT AGCATCGTGATAGCTTCATTGATGATCTTTACCATTCTTGGGTTTCCCCTGGCAATCACTTACAGTGTTCCTTATGCCTT AATATCCACGCATATTCAGCCATTGGGGCTTGGCCAAGGATTGTCAATGGGAATCCTAAATCTTGCAATAGTGTTCCCAC AGATGGTGGTGTCTTTGGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTGGCAGCT GTTGCAGCCCTCATCAGTGGACTCATAGCTGTCTTGGCCATTCCTCGATCTGGTGGTCAAAGGCCTAGAAGCCAAGTATG A
Protein sequence (LotjaGi1g1v0413100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANPDTTHRQQQQQQQRNRRSKPRPKPRARVPLTQLLKVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPL SGLFVQPLVGHMSDRCTNRFGRRRPFIVSGALFIIVSVLIIGHAADLGWRFGDTKTHRPAAVAFFVFGFWILDVANNVTQ GPCRALLGDLTGKDDRRTRVANAYFSLFMAIGNILGYATGSYSGWYKVFPFTLTPACNVSCANLKSAFFLDIIFIVITTY ISTVSAHEVPLNSSGAHPVEEGAGESGSAEEAFLWEMFGTFKYFSKPIWIILSVTALTWIGWFPFLLFDTDWMGREIYGG EPNEGPNYDIGVRMGALGLVLNSVVLGITSLLMERLCRNRGAGFVWGVSNILMAVCFVAMLVVTYVANYIGYVGKHLPPT SIVIASLMIFTILGFPLAITYSVPYALISTHIQPLGLGQGLSMGILNLAIVFPQMVVSLGSGPWDQLFGGGNSPAFAVAA VAALISGLIAVLAIPRSGGQRPRSQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| MobiDBLite | 1 | 28 | 28 | - | – | |
| MobiDBLite | 1 | 18 | 18 | - | – | |
| PANTHER | 6 | 504 | 499 | 2.2E-279 | – | |
| PANTHER | 6 | 504 | 499 | 2.2E-279 | – | |
| TMHMM | 29 | 51 | 23 | - | – | |
| TIGRFAM | 31 | 497 | 467 | 2.1E-230 | ||
| Gene3D | 34 | 493 | 460 | 5.0E-23 | – | |
| CDD | 36 | 492 | 457 | 7.12918E-131 | – | |
| SUPERFAMILY | 36 | 499 | 464 | 1.96E-30 | ||
| Phobius | 36 | 56 | 21 | - | – | |
| Pfam | 52 | 197 | 146 | 5.5E-13 | – | |
| Phobius | 57 | 67 | 11 | - | – | |
| TMHMM | 66 | 85 | 20 | - | – | |
| Phobius | 68 | 85 | 18 | - | – | |
| Phobius | 86 | 105 | 20 | - | – | |
| Phobius | 106 | 125 | 20 | - | – | |
| TMHMM | 106 | 125 | 20 | - | – | |
| Phobius | 126 | 139 | 14 | - | – | |
| Phobius | 140 | 159 | 20 | - | – | |
| TMHMM | 140 | 159 | 20 | - | – | |
| Phobius | 160 | 179 | 20 | - | – | |
| Phobius | 180 | 202 | 23 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 203 | 221 | 19 | - | – | |
| Phobius | 222 | 241 | 20 | - | – | |
| TMHMM | 227 | 244 | 18 | - | – | |
| Phobius | 242 | 286 | 45 | - | – | |
| Phobius | 287 | 308 | 22 | - | – | |
| TMHMM | 288 | 310 | 23 | - | – | |
| Phobius | 309 | 329 | 21 | - | – | |
| TMHMM | 330 | 352 | 23 | - | – | |
| Phobius | 330 | 352 | 23 | - | – | |
| Phobius | 353 | 363 | 11 | - | – | |
| TMHMM | 364 | 386 | 23 | - | – | |
| Phobius | 364 | 390 | 27 | - | – | |
| Phobius | 391 | 401 | 11 | - | – | |
| TMHMM | 401 | 423 | 23 | - | – | |
| Phobius | 402 | 423 | 22 | - | – | |
| Phobius | 424 | 434 | 11 | - | – | |
| Phobius | 435 | 455 | 21 | - | – | |
| TMHMM | 435 | 457 | 23 | - | – | |
| Phobius | 456 | 474 | 19 | - | – | |
| TMHMM | 472 | 494 | 23 | - | – | |
| Phobius | 475 | 494 | 20 | - | – | |
| Phobius | 495 | 506 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Sucrose transmembrane transporter activity | Enables the transfer of sucrose from one side of a membrane to the other. Sucrose is the disaccharide O-beta-D-fructofuranosyl-(2->1)-alpha-D-glucopyranoside, a sweet-tasting, non-reducing sugar isolated industrially from sugar beet or sugar cane. | ||
| Biological process | Sucrose transport | The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside. |
Expression pattern of LotjaGi1g1v0413100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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