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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0414700 |
| Transcript ID | LotjaGi1g1v0414700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphoglycerate mutase-like protein; TAIR: AT5G64460.1 Phosphoglycerate mutase family protein; Swiss-Prot: sp|Q9FGF0|PGML1_ARATH Phosphoglycerate mutase-like protein 1; TrEMBL-Plants: tr|I3S803|I3S803_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0414700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:90726940..90733737) extracted from Lotus japonicus Gifu genome v1.2.
GATGTGGATTGTGGAATATGCGAAGGATATGCAATGCAGCCAAATACGCCCCATTGAGTAAGCACTCCTACACTATAGGG AAGGAAAAGGTGAAGAAGGGTTGCAATTATCAAATTCAAATATTATACTATTATTATTTTTGCTGGTTTTGAATAAATAA AATAACGCCATGAGCATCATCACGCACCCAATTTTGTTGAATTCCGCTTTTGTCCCCACTCCTCCCATTTCAGTTTCAGT TTCAGATCCTCGCCGCGCTTCTCAACGGTTTCCTCCGCATTTTCTCTGCTTCTCTTCTCTCTCAGCCTCACCCTCAGGTT CTCTCTCTCTGTTCCTTGCTAGCTATAAATTTGTGACTATTCAACTTCGATTTGGTAATGCAACAGTGACGGTGAAGATT TCTTCATCATCACCGTAATATCGACGATTTGTTCAGTATTACGATCGAACAAATAATCACGGTGGCGATTCACGATTTTC TTTCATGTCACTGCAGATATGGATGCTAATGTGAGCCAAGGTCTTTACCCGCTGCACCGTTCTAAAACTCTTCACCTGGT TGGTTTGTCAAAACTTCATCCTTCAACCTCATTTTTTTTTTATTTTTCGCATTCGATACTAAATATTTTGTGTTTTTACT GGTCTAGTGTTGATAACTTATCACGTTCTGACTGAAATTGCAACTTGATTTTTTTTACTAAGCTGTGAAGTTCAATAAGA TTAGGAAATGCATGAAATTCAGTTCACATGGACCGAAATTCCTTTAAGTCAATATTTCAAAGGTGGAAGTGGATCATTGG ATAAATCAGGGTTGTTAATAGTGGCGCAATAGCGCTATAGCGTAGCTCCCTGGGCTGGGGGTTCACCACTACTCCGCTAT TTGCCACTATAGCGCTCGAAATAGCGTTTTTTGGGCTTGCTTCTACGCTACGCTATCCGTCATTAACAACCCTGGGATAA ATATTAGGGGTTTGTAGCATTTGTATTGGAGTGTGCTTTATTTTGGTTCTTGAGAAGATCATTTGCTTACTTTCAAAATT ATGAAGTTCAGATCTAATTTTGTTACAGGTTAGACATGCCCAAGGGTTTCACAATGTAGCAGGAGAAAAGGACCCAGAGG CATACTTGTCTTATGATTATTTGGATGCAAGCCTAACCCCTCTGGGCTGGAATCAGGTAATTCTTAGTCAAAACGATTAC TGTCATTTTTGTATTGTGTGGAATCTTGAGGTGTCAGTTATCAAGAAAAATATTTCAAACTTCTGTAGTGATTGCCTGAT TGGTATTGGTCTTATCCGTTAGTGTTCAGTAAGTTGTGTCTCATCGGACAAAGATGCCATGGTGATTATCTCGTTCTACT TTAGATATCTTTCTAGCTGGTTCTTCCCATCGTTTATCCAGGTTAATATTTGGGTTTTAAAACCACATGATGATGGAATA TTTGTGGGCTATTTGACAGGTTGATAATCTGCGAGAGCATGTTAAGTCAAGTGGTCTATCCAAAGGAATCGAACTAGTGA TTACTTCACCCTTGACAAGGTATAACCTCATTGTAATTTGGAATTCTCCTGAAACTGTTACTAGCGGAATTTTTACAAAA TTTGTTACTTCTGTTGCTGTTTACCATTAACATGGATCCTGACCAAGGTCTTGAAGATATGTTGAAATTTACCAGGTAGG TTGGTGTAGATACTTATAGGTGATGTGAATTGAAAGCTGATTTGTAATGATGTGAGAGTGTATTGTAATTGGTATGTCCT TTAAAAATCAGGAACTGGATAGCATTTACCTCGTGAAACTTTGAGTTAAGATAACAGAACTGAACTCAAATGGCCATATA TAAAACTTCAAATACTAAATTAACTTTTTCTCTTTTTAACTATAATGTTTAACCGGTTGTCTAAAGATGGATAAAACTCT CAAGTTTCTACCAAAGCTTAGTTTTATGACTCTTCTTGACCAAAATCCAGCAGAGCACTAATATTCAGGTTTCAGAGAGA GAATGTCTCATGTAACATTTAGAATTATATATTGTGTCTGCTATTATATTATATTATATAGATGTGTACATTTGTTTAAT GTCTACCATCTATTATTGTAATATCTTTCAAATATTATTGTAGTTTCAAATATGAGTGAACTATGCTTGTTAATAGATGG TTTCCAATTTATTTTTAAACTCAGAAAAAGCTAGTAAAACTGGAATGATGTTCTATGAACATGTCATTCTGCCCATGTAG TTTGTACTTTTATATGTGGTTTATGTATAGTAAGTATTTATCATGATTTGGAGTTTGTCCTTTTAGTTACACATTGTTTC GTGGGGTTACATTGGTATTTTCACAGAATAAATGTTTTGCATATTAGTGAATAAACAAGAGTGTTTCTCTACTTTTGGGG GGAAGGTGGCTATCATAAATTCTATTTGCTAATTATCTCATTGCAGGACCATGCAAACAGCAGTAGGAGTCTTTGGTGGT GAAGCATCCACTGATGGGATTGACTCCCCTCCTCTGATGATTGACAATGCGGGGGATAGTGCTCGTCCTGCAATTTCTAG TTTGAATTCACCACCATTTTTAGCAGTAGAGCTTTGCCGAGAGCATTTGGTATGTAATGATGTTGAAGATTTTATAGCTT TGGAATTCGGATGGTTGAAATAGCTAATTACATTTATCATTTCATTGCTTTCTTACATTCTCACAGTTCCTAATTCTAAT TTGGGTTTTCTTCATACTTAAAACCTTAAAGAAGGTACAGCATAAATCATTAGGAAATGTACCTGGTGACCTGCTTAAAT CACATGCTAACCATCTGCCTTACCTTACCATCTTGATGCCTTCTTTCCATATTTAGGAAACTCTAATTTATCATGTTGCC CATTTACTGATGTTTGTTTGTTGAATTCTTTAAAAATCATCGTATCAGCTTCTTGCGGAGCTACAGTAAGGTCATACTTG CCACTTTCCCAGTCCCAACTTTGGCCCATTTATTTTTGTTCCTTAACCCAAAGCACTTGGCATGATTGTGTCTTTAACTG AATTTTCTAAGTCTTGTTAAATAGTTCTAGATTTCCTGATTCATTGTGGGATGAGGACATGAGATGTGTCTTCAGCAATT TGCTCCTTTGTATTGCTTTATATTCTGACTTTCTGATTGTATATATTTTCAAATATTTCTTTTCTTCCATTGGTCAACGG GTGGAAATTTCTCAATTTCAGAATTCATGTGGCCTATGGACCTGTAGCTAGTGACTAGATTAGATTAGGTTATGTTGTTT AGTTTCTATTTCTTCAGGGGGTTCATTTGGCATTGAGTTTCATTTAGCTTTGGTGTTTATGTTGTTTCTTTCTATTTCAG GGGGTGCATCCTTGTGATAAGAGAAGAAGCATCACAGAATATCGTAATATATTTCCAGCAATTGATTTTTCACTGGTAAT TGGTCTATTTTGATTAGCTCATAACCTAGGTGCTACTTCAATTAAGTTTGTTCTGATGTATTTGTTGCTAAAATAGATTT GTTATTTGGTTAGATAGGAGTATAGGACTGATGCTTCATACTTGGTACAAATTATGTTTAGATAGAAATTGATGAGGACA TTTTGTGGAAACCTGACGTTAGAGAAAAGAATGAAGAAGTTGCTGCCAGGGGACTGAGATTTTTGGAATGGTGAGTGTGA TTAAATAAATTATTTGATATCAATGACTATGCATATTTTAAAAGAAGATTTTTTATTTAAATGCCTTGTTAGAAGTCCTA CATTGGCTAGAGATATGACATAGATCGCCTGTAAAAAGGCTAGAGGAACCCTCAACTCTTGAGCTAGCTTTTGGGTTAAG TTAGGCCTCTCTAATTCTAATATGATATCAGAACCTATCTTAGATCAATTTGTTGGTGGGGACCTCCCATATTTGGGTCA CCCTGTAGATATCTAGTCCTGCAAATCCCACACTCCAGATGTCCATCCCTGGGCGCGAGGGGTGGTGTTAGAAGTCTCAC ATTGGCTAGAGATATGACATAAAGGGTAGAGCAACCCTCAACTCTTGAGCTAGCTTTTGAGTTGAGTTAGGTCTCCCAAA TTCTAATAGGCTTGAACATACTGAACCGAAAGAATTATATTACTGCGTGTTACGTCAAAGTGTAGTGGTAAAGAGGCTAT GTTGCTTAGCTTGATCTTGAGACCCTTCGGGTGTGATGGTAGAAGTTGTTCTTGATTCCTGGTGGAGAAATTCAAGTCAA GGAGAAGAATTGTTGAGGTGTTTTTTATTCATTATGTTGTTGGAATATAGTCATTGCAATATGGCCGTTGAAATATGACC GTTAGAATATGGTCGTTGGATCATATTCCAACGGTCGTATTCAACGGCCACATTGCAATGATTATATTGCAATCACTATA TTCCAACAACATTATTAATGAATAATTTAAGACACTTCAACAATTCTCCATCCTTGACTTGAATTTCCCCACCAGGAATC AAGAACTGTCACTCCTGCCATCACACTCCGAAGGGTCTCAAGATCAAGCTGAGCAACATAACATCTCTGTAATATTGTTC TTTGTATAGTGGAGAAAGAAATCCCTCTGGCTGCCCGAAGATTTCTTTCTTCATTATACAAAGATGTTATGTTGCTTAGT TTGGCTTACTATGAAAATTACTAGCACATATATACACTGAAATGATTGCAACCCAACGACCATAAACAAGCATATTCCAA CGGCTATATTCCAACGACTATATTGCAACAACTATATTCCAACGGCTATATTGCAACGACTATATTCGAGCAACCGTAAT TAATGATTAGTTCAAGACAACTCAACACTATGATGGAGGTTTAAGCTAAAAAGTCTTTAATTGGTTGGATAAGGTTGACT TTTTTTACCAATCTGCACTAATTTTGATAATGACAAGACATTCAAGCAAATCATGTGGTATCCCAATTTGAGTTCTTTTT TTTCCAGTGTGTTGCTGCATGGAATCTGAAGCAAATATTTGAATTAGTCCATAATATTTTTGGCTTTTTTTCATATTGGT GGCTTTAGATTTTAAGGGTATCATGTTAGTGTGCAAGTGATATCTCTGTAGGAAGACATGGCTTCAAGTCTATAAACCAA ACTCTGATATTTTCTTTTCACATTAACTTATTGGTCCAGGTTGTGGACACGTAAAGAAAAGGAGATTGCTGTTGTTTCCC ACAGTGGTTTTCTTTTTCATGCCCTCAGTGCTTTTGGAAACGATTGTCATCCAACTGTGAAGAATGAAATCTGCACACAG TAAGTATTCATCTAGAAGTATTGGCTTACCTTTTTCATGAACAGAAAATTCAGATTTTGGGATTTATGACCCAAAGAATA AAGAATTAGGTGCCTTTTATTTCTAAAAATAAATTGGATAATGAAAACTGAAGGACCAATTTGAATCATTTAAGGAAAAA CAGGAAGTTCAATTTTAATTCATCGTCATGTTCAAAAAGTTTTACATTGTCACTCAATGTTGTATTTTTACATCATTTAA TGAGTGTTTTTCCTTCTCATAAATTGTGTGGCAAGTGGATACTCATTATTGGTTGACAGTGTATAACTTTTTCTATATCA AGAATCCATCAAAATTAAATTCGATATAAGAAGGAAAATGATCATGACTCCATCGTATGTTGTTCACTTCCCTTCAGAAA ATTTTATGCATTTGTACTCCACATAATGTAAACTTTTACTTTCAACCTTTAGTGTTAATTTGGTGTTCCTCTTAAAATTG GAGGTGTAAAATAGTTGCTTTACAAAAAATTGTGAAAAGCGAACCTTTTAATTCTTCACTCCCAAATTTAAGAGAATATT ACTCTTGCTTGGATTAAAGGAAAGGAAACTAGAGTGGAATAGTATGAAATGATGATGACATTAGTTGTCAATAGGATGAA ATGGAATGGAACTTGATGACTGATTATTATGTATTACATTCCATTCAATACCATTTCTTTTGCCCAATTTGACGGAACCA ACTTATTCTTCATTAATTTCGTTACTATTTAGCACACTTTTGATATTCAAACATTCATATGCTAATTTTATTCTATTTCA TCTCACTCAACCTTTAATTAGATATCCAAATACAGATTAAGCAAATAGCAGGTTTGCTACCATTTTTCTAGACTTTAATA TGACTGATCACTAAAATTTCTCCTTTTTTACAGCTTTGCTAATTGTGAGCTGCGTTCAATGGTTATCGTTGATAGAGGGT GAGCATTTTAATTGCAGAACAAATTATAATCAAACTTTGGCAGAAAATTCATTTGAGTTTTCATTTTTGCAGTCTGATTG GATCAGATGATCCCTCTTCCAATTATCCTGGCAAAATTCCACATGGCCTTGACCTGCCTAGTGATATTGCTGACGAGAAA CTTGCGGCGAATGGCCCTGCAAATTAACTGATAACTGGCAAACTGTTATTACATGATGGGTTTTTCTTCAGTTATATGAT TTCATAATTTGCATTATAGGCTTTCCCAATGCTAAACATCGATCTAGGTGTCCACTTTTTAAGATGGATGACCACAATGA TTACTCTATTTGAGCATTCATTAATGGCTTTCAATTTCATGTATGAACAATGGACATTATGCTCTTTTTCATTTAATGGT TAACGCCTTCTCATAGTAACCTTACTCCCTCTTTCTTGTGGTGGCCAGAAAGGCAATTAGAGTCTGGTCTATGATTAAAC AGGGGTTGAGATTGTTGATGAGAAAACATAAAAAAATACAAAATTTCTTCTCATATTTTGTGATCCAATATGGATATA
CDS sequence (LotjaGi1g1v0414700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCTAATGTGAGCCAAGGTCTTTACCCGCTGCACCGTTCTAAAACTCTTCACCTGGTTAGACATGCCCAAGGGTT TCACAATGTAGCAGGAGAAAAGGACCCAGAGGCATACTTGTCTTATGATTATTTGGATGCAAGCCTAACCCCTCTGGGCT GGAATCAGGTTGATAATCTGCGAGAGCATGTTAAGTCAAGTGGTCTATCCAAAGGAATCGAACTAGTGATTACTTCACCC TTGACAAGGACCATGCAAACAGCAGTAGGAGTCTTTGGTGGTGAAGCATCCACTGATGGGATTGACTCCCCTCCTCTGAT GATTGACAATGCGGGGGATAGTGCTCGTCCTGCAATTTCTAGTTTGAATTCACCACCATTTTTAGCAGTAGAGCTTTGCC GAGAGCATTTGGGGGTGCATCCTTGTGATAAGAGAAGAAGCATCACAGAATATCGTAATATATTTCCAGCAATTGATTTT TCACTGATAGAAATTGATGAGGACATTTTGTGGAAACCTGACGTTAGAGAAAAGAATGAAGAAGTTGCTGCCAGGGGACT GAGATTTTTGGAATGGTTGTGGACACGTAAAGAAAAGGAGATTGCTGTTGTTTCCCACAGTGGTTTTCTTTTTCATGCCC TCAGTGCTTTTGGAAACGATTGTCATCCAACTGTGAAGAATGAAATCTGCACACACTTTGCTAATTGTGAGCTGCGTTCA ATGGTTATCGTTGATAGAGGTCTGATTGGATCAGATGATCCCTCTTCCAATTATCCTGGCAAAATTCCACATGGCCTTGA CCTGCCTAGTGATATTGCTGACGAGAAACTTGCGGCGAATGGCCCTGCAAATTAA
Protein sequence (LotjaGi1g1v0414700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDANVSQGLYPLHRSKTLHLVRHAQGFHNVAGEKDPEAYLSYDYLDASLTPLGWNQVDNLREHVKSSGLSKGIELVITSP LTRTMQTAVGVFGGEASTDGIDSPPLMIDNAGDSARPAISSLNSPPFLAVELCREHLGVHPCDKRRSITEYRNIFPAIDF SLIEIDEDILWKPDVREKNEEVAARGLRFLEWLWTRKEKEIAVVSHSGFLFHALSAFGNDCHPTVKNEICTHFANCELRS MVIVDRGLIGSDDPSSNYPGKIPHGLDLPSDIADEKLAANGPAN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 278 | 278 | 2.6E-143 | – | |
| PANTHER | 1 | 278 | 278 | 2.6E-143 | – | |
| Gene3D | 15 | 247 | 233 | 3.2E-28 | ||
| SUPERFAMILY | 16 | 248 | 233 | 4.4E-30 | ||
| CDD | 17 | 88 | 72 | 6.51126E-12 | ||
| SMART | 17 | 213 | 197 | 1.2E-8 | ||
| Pfam | 18 | 90 | 73 | 3.8E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0414700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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