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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0418500 |
| Transcript ID | LotjaGi1g1v0418500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transcription repressor; TAIR: AT5G19650.1 ovate family protein 8; Swiss-Prot: sp|Q3E9B4|OFP8_ARATH Transcription repressor OFP8; TrEMBL-Plants: tr|A0A0L9V925|A0A0L9V925_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0418500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:91214671..91216850) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATGATAGCTTAAGTCGTAAGAGCTAAGAGGCATATCATATGAGTTGGGAAAGGGAAGACCTAGAGATCGATCCTGA AAAAAATCATTTATCTTTCCAATGTAAAAAAAAATTCAACCGACTCCCATAAATTACATATGAATGAAGGAATTGTCTAA TTTATTCAATGAATTACACAATCACAGTTTCCGCTTTTTAATTGATAAGAGAAGTTCTAAGAAGTTGTGATTCTTGCACT TATGTGCTTGTCCTCATGGTATGTGTCACCTAACTCCCTTTGAGAGTTAATTTAGATAAAAGATTTCAATGGCCAACAAT GATATATATACACCTCATTTTTTAAACACTTCATTTCCACCTATTTTTATTTATATCTTTCTCCTCTTATCATCTATCAC ATCTCGTACTTTCTCTCTCTTACTTTTTATTTTCTTCCTATCTCTCTTCTCATTCTACTTCTTCCACCTCTTTTTGAGGT GTGTAAGTAACATTTTCCTTTTTCCTTCAATGACCCAACATGTCGGGAGGATTTTAAATAATTTAGCCTAAAATGTATTA TTTATTAGAATACCAATTCAAAACACCTGACATTTCCACGAGCAATCTTTTAAGTACAAAATAGAATTTCAAATTCCACT TTACTACTAAAAAACTTTCATACCTATACCAAAATCTTCTCTTACAAAAACCTTTCAAAATTACCAACAAGTATGTATAT CAACTAGGTCAGTTTTCTTTTTTCGATGTTAATTAGACATCTCATAGTCGATAATCATGAGTCTTTGCCGCACTCTTAAA TACTTGATAGGAATAACTTTCTCATTTATAATAATCCTAACCGGCTCGAACAAGATTGTTTCAGTTGATGATAATGTGGG TTGAATAAAAAATAACTCACTCATGTGTCTTTCGTTTAATTTGTCCTAACTCCTTAGACTTTTCATGCCGGCCTTTCTTT CATTTTAATTTAATACTTCCCTTTATAAATAAACTTCAATCCTTTGTTAGCGTTACACAGTCACTGCCATTTTATTAAAG GTTTAATTTCATAGAATAGCGTAGCAGCAACAATGGCTAGTAATAGTAAACGCTTCAAGCTGAAATTCACAATCCCTTCA CTTCAAATGTGCCGATCCAAACACGACCTTAGCACTTTCCCTATAAACCCTCTTCCCGCCATTTACCGTCTTTCCCCAGT CAACCCCAAATCACACCAATCACGCCACCACCACCACCCTGCTCCGCCGCCAGCCTCACCGGAACACCACCACAGCCACC ACGTGTCGTCGTCATCATCAAATTCCTCGCGCTCTCATCACAATGCAATAACCAGAGGCCGAAAAAGCACCTCAAGCGTT CCCTCGAAGAGGAGCAATTTCGCGATTGATAGCATCAATGAAGAAGAGAGCGAGTCGCTAATCTCTTGCTTAACAAGTTT CTCAGATGATTTCAGTCACGATCTTAATAAAACGGAGAATTCTAACAGAGATTTGACTAATAACTGGAAAATTAGCAGCG TGAAGAAGGTTCAGGGTGTGAGATTGGAGAATCGGATTAGGAGATTACCTGAATCGACGATGATGAAGAGATCGTCATCG TCGGCGTCGTCGTCGGTGAAAGAGAGGTTTGCGGTGGTGAAGAAGACGTCGAAGGAGCCGTACGATGACTTCAGGAAATC GATGGTAGAGATGATAACGGAGATGGAGATATCTGCGGCGGAGGATCTGGAGCAGTTATTGCAGAGTTTCCTGGCTTTGA ACTCTCGGAGATATCATGAGATGATTGTGCGAGCTTTCATGGAGATCTGGCAGCAAATGTTCATTTGGAACCCTGCATCT GTGAAAAGTCTCAAGAATGGTGGTGTTAAAACGGATTTGGAAGACTAGTTTATTTATTTATTATTTCATGAAGTTTTATT TCTTTTCATTTTATCAGGCGTGAGATTATACAAAAAAGTTTGATTTTGTTTTGGTTTTTTTTTAGAAAGAGGATTAAATC ATGTAAAGGGTTGGTGTGATTTTATTTCTTATAAAGACACGCAAACTTTGGTTATATGAACTTAGCCAAGATTGCTCATT GTACATTTTGGATTTTACATTAGGGGTTTCTTTGGGTATAAACCCTCATTGTTTAAAGCGTTTATCACAAAAGCTTATTT ATAAGCTAATCTTAGTTGTT
CDS sequence (LotjaGi1g1v0418500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAGTAATAGTAAACGCTTCAAGCTGAAATTCACAATCCCTTCACTTCAAATGTGCCGATCCAAACACGACCTTAG CACTTTCCCTATAAACCCTCTTCCCGCCATTTACCGTCTTTCCCCAGTCAACCCCAAATCACACCAATCACGCCACCACC ACCACCCTGCTCCGCCGCCAGCCTCACCGGAACACCACCACAGCCACCACGTGTCGTCGTCATCATCAAATTCCTCGCGC TCTCATCACAATGCAATAACCAGAGGCCGAAAAAGCACCTCAAGCGTTCCCTCGAAGAGGAGCAATTTCGCGATTGATAG CATCAATGAAGAAGAGAGCGAGTCGCTAATCTCTTGCTTAACAAGTTTCTCAGATGATTTCAGTCACGATCTTAATAAAA CGGAGAATTCTAACAGAGATTTGACTAATAACTGGAAAATTAGCAGCGTGAAGAAGGTTCAGGGTGTGAGATTGGAGAAT CGGATTAGGAGATTACCTGAATCGACGATGATGAAGAGATCGTCATCGTCGGCGTCGTCGTCGGTGAAAGAGAGGTTTGC GGTGGTGAAGAAGACGTCGAAGGAGCCGTACGATGACTTCAGGAAATCGATGGTAGAGATGATAACGGAGATGGAGATAT CTGCGGCGGAGGATCTGGAGCAGTTATTGCAGAGTTTCCTGGCTTTGAACTCTCGGAGATATCATGAGATGATTGTGCGA GCTTTCATGGAGATCTGGCAGCAAATGTTCATTTGGAACCCTGCATCTGTGAAAAGTCTCAAGAATGGTGGTGTTAAAAC GGATTTGGAAGACTAG
Protein sequence (LotjaGi1g1v0418500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASNSKRFKLKFTIPSLQMCRSKHDLSTFPINPLPAIYRLSPVNPKSHQSRHHHHPAPPPASPEHHHSHHVSSSSSNSSR SHHNAITRGRKSTSSVPSKRSNFAIDSINEEESESLISCLTSFSDDFSHDLNKTENSNRDLTNNWKISSVKKVQGVRLEN RIRRLPESTMMKRSSSSASSSVKERFAVVKKTSKEPYDDFRKSMVEMITEMEISAAEDLEQLLQSFLALNSRRYHEMIVR AFMEIWQQMFIWNPASVKSLKNGGVKTDLED
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 62 | 58 | 2.0E-57 | ||
| PANTHER | 5 | 62 | 58 | 2.0E-57 | – | |
| MobiDBLite | 40 | 100 | 61 | - | – | |
| MobiDBLite | 57 | 71 | 15 | - | – | |
| MobiDBLite | 72 | 100 | 29 | - | – | |
| PANTHER | 80 | 251 | 172 | 2.0E-57 | – | |
| PANTHER | 80 | 251 | 172 | 2.0E-57 | ||
| TIGRFAM | 189 | 249 | 61 | 7.6E-22 | ||
| ProSiteProfiles | 189 | 248 | 60 | 16.884 | ||
| Pfam | 193 | 250 | 58 | 1.0E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Negative regulation of transcription, DNA-templated | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0418500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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