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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR038933
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.783s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0107100.1
n.a. transcription repressor; TAIR: AT5G58360.1 ovate family protein 3; Swiss-Prot: sp|Q9LVL4|OFP3_ARATH Transcription repressor OFP3; TrEMBL-Plants: tr|I3S9L8|I3S9L8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0107100 LjG1.1_chr1 16629159 16631809 -
2 domain predictions
1 GO term
LotjaGi1g1v0418500.1
n.a. transcription repressor; TAIR: AT5G19650.1 ovate family protein 8; Swiss-Prot: sp|Q3E9B4|OFP8_ARATH Transcription repressor OFP8; TrEMBL-Plants: tr|A0A0L9V925|A0A0L9V925_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0418500 LjG1.1_chr1 91214671 91216850 -
2 domain predictions
1 GO term
LotjaGi1g1v0454700.1
n.a. transcription repressor; TAIR: AT1G06920.1 ovate family protein 4; Swiss-Prot: sp|F4HNU8|OFP4_ARATH Transcription repressor OFP4; TrEMBL-Plants: tr|V7B5F3|V7B5F3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0454700 LjG1.1_chr1 95682344 95685593 +
2 domain predictions
1 GO term
LotjaGi1g1v0717500.1
n.a. Transcription repressor ofp12; TAIR: AT1G05420.1 ovate family protein 12; Swiss-Prot: sp|F4I8R6|OFP12_ARATH Transcription repressor OFP12; TrEMBL-Plants: tr|A0A072U262|A0A072U262_MEDTR Ovate transcriptional repressor; Found in the gene: LotjaGi1g1v0717500 LjG1.1_chr1 128591104 128592912 +
2 domain predictions
1 GO term
LotjaGi1g1v0735200.1
n.a. transcription repressor; TAIR: AT5G04820.1 ovate family protein 13; Swiss-Prot: sp|Q9FMC8|OPF13_ARATH Transcription repressor OFP13; TrEMBL-Plants: tr|G7ZUW4|G7ZUW4_MEDTR Ovate transcriptional repressor; Found in the gene: LotjaGi1g1v0735200 LjG1.1_chr1 130903153 130904968 +
2 domain predictions
1 GO term
LotjaGi3g1v0016500.1
n.a. Ovate transcriptional repressor; TAIR: AT1G79960.1 ovate family protein 14; Swiss-Prot: sp|Q9S7T5|OFP14_ARATH Transcription repressor OFP14; TrEMBL-Plants: tr|G7II51|G7II51_MEDTR Ovate transcriptional repressor; Found in the gene: LotjaGi3g1v0016500 LjG1.1_chr3 1722093 1728595 -
2 domain predictions
1 GO term
LotjaGi3g1v0152600.1
n.a. transcription repressor; TAIR: AT1G06920.1 ovate family protein 4; Swiss-Prot: sp|O04351|OFP2_ARATH Transcription repressor OFP2; TrEMBL-Plants: tr|I3S027|I3S027_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0152600 LjG1.1_chr3 20611617 20613978 -
2 domain predictions
1 GO term
LotjaGi3g1v0181100.1
n.a. transcription repressor; TAIR: AT3G52525.1 ovate family protein 6; Swiss-Prot: sp|Q3EAL1|OFP6_ARATH Transcription repressor OFP6; TrEMBL-Plants: tr|K7LVS9|K7LVS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0181100 LjG1.1_chr3 25220965 25222841 -
2 domain predictions
1 GO term
LotjaGi3g1v0362700.1
n.a. Ovate transcriptional repressor; TAIR: AT1G79960.1 ovate family protein 14; Swiss-Prot: sp|Q9S7T5|OFP14_ARATH Transcription repressor OFP14; TrEMBL-Plants: tr|A0A072UI43|A0A072UI43_MEDTR Ovate transcriptional repressor; Found in the gene: LotjaGi3g1v0362700 LjG1.1_chr3 74870105 74871164 -
2 domain predictions
1 GO term
LotjaGi3g1v0362900.1
n.a. Ovate transcriptional repressor; TAIR: AT1G79960.1 ovate family protein 14; Swiss-Prot: sp|Q9S7T5|OFP14_ARATH Transcription repressor OFP14; TrEMBL-Plants: tr|A0A182BF98|A0A182BF98_LUPAN Putative transcription repressor ofp14; Found in the gene: LotjaGi3g1v0362900 LjG1.1_chr3 74895842 74897416 -
2 domain predictions
1 GO term
LotjaGi3g1v0473500.1
n.a. transcription repressor; TAIR: AT3G52525.1 ovate family protein 6; Swiss-Prot: sp|Q3EAL1|OFP6_ARATH Transcription repressor OFP6; TrEMBL-Plants: tr|I1LKN3|I1LKN3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0473500 LjG1.1_chr3 89033430 89039084 +
2 domain predictions
1 GO term
LotjaGi3g1v0473500.2
n.a. transcription repressor; TAIR: AT3G52525.1 ovate family protein 6; Swiss-Prot: sp|Q3EAL1|OFP6_ARATH Transcription repressor OFP6; TrEMBL-Plants: tr|I1LKN3|I1LKN3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0473500 LjG1.1_chr3 89035546 89038638 +
2 domain predictions
1 GO term
LotjaGi4g1v0380900.1
n.a. transcription repressor; TAIR: AT1G06920.1 ovate family protein 4; Swiss-Prot: sp|F4HNU8|OFP4_ARATH Transcription repressor OFP4; TrEMBL-Plants: tr|A0A151RVF7|A0A151RVF7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0380900 LjG1.1_chr4 75990244 75991780 +
2 domain predictions
1 GO term
LotjaGi5g1v0017600.1
n.a. transcription repressor; TAIR: AT5G19650.1 ovate family protein 8; Swiss-Prot: sp|Q3E9B4|OFP8_ARATH Transcription repressor OFP8; TrEMBL-Plants: tr|A0A0D2QJP7|A0A0D2QJP7_GOSRA Uncharacterized protein; Found in the gene: LotjaGi5g1v0017600 LjG1.1_chr5 3471778 3474323 +
2 domain predictions
1 GO term
LotjaGi5g1v0100100.1
n.a. transcription repressor; TAIR: AT2G36026.1 Ovate family protein; Swiss-Prot: sp|Q3EAL1|OFP6_ARATH Transcription repressor OFP6; TrEMBL-Plants: tr|I1JQ68|I1JQ68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0100100 LjG1.1_chr5 18062726 18063572 +
2 domain predictions
1 GO term
LotjaGi5g1v0100300.1
n.a. transcription repressor; TAIR: AT5G04820.1 ovate family protein 13; Swiss-Prot: sp|Q9FMC8|OPF13_ARATH Transcription repressor OFP13; TrEMBL-Plants: tr|A0A1J7HFE9|A0A1J7HFE9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0100300 LjG1.1_chr5 18104804 18105968 -
2 domain predictions
1 GO term
LotjaGi5g1v0313200.1
n.a. transcription repressor; TAIR: AT1G05420.2 ovate family protein 12; Swiss-Prot: sp|F4I8R6|OFP12_ARATH Transcription repressor OFP12; TrEMBL-Plants: tr|A0A072W0S4|A0A072W0S4_MEDTR Ovate transcriptional repressor; Found in the gene: LotjaGi5g1v0313200 LjG1.1_chr5 63172765 63174491 +
2 domain predictions
1 GO term
LotjaGi5g1v0342700.1
n.a. transcription repressor; TAIR: AT5G04820.1 ovate family protein 13; Swiss-Prot: sp|Q9FMC8|OPF13_ARATH Transcription repressor OFP13; TrEMBL-Plants: tr|C6T3D2|C6T3D2_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0342700 LjG1.1_chr5 65979169 65980819 -
2 domain predictions
1 GO term