Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0427500 |
| Transcript ID | LotjaGi1g1v0427500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Filament-plant-like protein; TAIR: AT1G19835.1 filament-like protein (DUF869); Swiss-Prot: sp|Q0WSY2|FPP4_ARATH Filament-like plant protein 4; TrEMBL-Plants: tr|K7KHS2|K7KHS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0427500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92159943..92165675) extracted from Lotus japonicus Gifu genome v1.2.
GTCCAACGTTGTGTCCTTCCTTTTTAAGTCTCCAGACACAATCACCTTACAATTTCAGATTACCATCTTTAGGAGAAGAG GACCTTACAAATTTCACCCTCTGTGATCTCCCATTCAATATTCCCATTCACCATTGTTGCAGGCACCACCTACTCTGGTA TGCTGATTATTTTACTCTCACTTTTTCATCTTCACCATTCACATTTTTCTTCCAACTTGAAACAGTTTCAGTCACTGAAA CACTTTTTTTTGTCGGTGACTTGAACCTTCTTCCAAACACAGAAGAAACCAATTCAACCTCTTAGCAACTGGTTAATTAG GGTGCATGCTTTTAATCTTGGTTGCTGTAAACTGATTAATTTGGATCTAATTTTAGTTACTAGTATTTATTTAGTAATAA TAATTAATAATTAATCATTATTATTATGAAAGCTCTCTTTCATCTTTTTTAATTATTATTATTTATAATAAATTAGCTAG CTTGCTTTCATGACAAGTTTGGTTTGAGAGCAATTGAGGAATAAAATAGTGTTGTTGTAGCACATTAGAGAGATGATATT GATAGGGAAGTTGCAGCAGTGGTTAGATCTTGATCTTGAACAAGATGGAGGTTACATTAATGAAAACGTGATACCATTGT CTTGTGGATATCTGTCACTGTAGAGCCAGTACCACCCTAGCTTCAATGCATTTTCACCAATATAGTAATCTCTCAACACC AGGGACACTAGCTTTGGTTCAACGTTTTACATTTACCGACAAAAAGTCACCAAAATTCTCTGCTTACTTATTGAAAATTT TAAGGTCTAAATTCATTCCTGCTTGATGAAATGATGTAGTTGAATTGAATACCAAGGTTGAATCACAATATTCTGTTTTT TTCTGTTTGTAGTGTGAGAATTTTGCTTGCATTAGTATAAACAACCTCATCCAACTCTTCACTTACATATATATATATTT GATTCTAGCTTCTGTAGAGAAATTCTACACGGTCTTTATAGTTTCCGATGGATCGGCGCTGGCCATGGAAGAAAAAATCG TCTGATAAGGCTGTGCCTGAGAAAGTAGCTGTTGCATTGGACTCCTCTGAAGCTTCCAACCAGGTATATTTATAGTATGT TTGGATTAACTTCTCTTTCATAAGAATCAATTATGGAATCCAGAAGAACCGTCTCCCCAAATTGTTTCTGGTTTCAAATA AATTGTATTAGAGTTTGTGAACATGCACTTATTGGCATTTTCTCAAACAAGAAAAATGTACTTTCAAAGTTTTGTGCCTA AGATTTCCCCCTGGTCCTCGCTGCTATTTTGCAGCTAAGTTCCACTTTATAGTTTTAATTTGAGTCTGACTATTTTATCA ATTTTTTATGTCAGAGATTTTGCCTATTTTGCATATGAACTTCTTCTTTAATTATTTATTATATTGGCTTTGTCATCTTA TATATTTTCTGTGTTGATTTACTTATGCAAACAGGATAGCAGCAAGAAACCAAACTATGTCCAAATCTCTGTGGAATCCT ATTCACACCTCACAGGTTTGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCAGAAGCTTGAGGATGAGATGCAGGAA ATGAATGAAAAGCTTTCAGCGGCTAACTCTGAGATTGAAACCAAGGAAGGCATGGTAAAACAACATGCTAAAGTAGCTGA AGAAGCTGTCTCAGGTATAATGCTTAATGATTTTATACCACCTCAAATAGCATGTTTCGATCAACTTATTTTTCTTGGAA TCAATTTTGGCATCTAGAAGCTATTCATTACTCACATAAGCTTCTCCCTGGAATTGATTTTAATTTTAGAATAAACTGTA GAAGTATTACCAAACATGCACAAAGTTGTTCAAGCTTTAAACTTCCTTACTATAAATTGCTTCTCAATGTTCTTGGAATT TAAGTTCTATTGACACTCTGCAGGCTGGGAAAAGGCTGAAGCTGAAGCTTTGGCATTGAAGAACCATCTCGAATCTGTCA CTCTTTTGAAACTCACTGCTGAGGACCGTGCATCGCATTTAGATGGTGCTCTTAAAGAGTGTATGCGGCAGATACGGAAC CTTAAGGAAGAACATGAACAGAATATACAGGAAGTTTCTCTCTCGAAAACCAAGCAATTAGACAAGATCAAGGGGGAACT TGAGGCTAAGATAGTTAACTTTGAACAGGAACTCCTTAGGTCTGCTGCTGAAAATGGGTCTTTGTCAAGATCCTTGCAGG AGCGCTCTAACATGATAGTCCAATTAAGAGAAGAAAAAGCTCAGGCTGAGGCGGAAATTGAGCATCTTAAGAGCAACATG GAATCGTGTGAAAGAGAAATTAATTCACTTAAATATGAACTTCATGTTATTTCCAAAGAACTGGAAATTCGCAATGAAGA AAAAAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCAAATGGAGGGCGTGAAAAAAATTGCCAAGTTAGAAG CTGAGTGCCAAAGATTACGTGGTCTAGTGCGGAAGAAGTTACCTGGTCCTGCTGCACTTGCACAGATGAAGCTAGAAGTT GAAAGTCTTGGCCGAGATCATGGAGAAAGTCGATCAAGGAAGTCTCCTGCGAGGCCTGCTTCCCCTAATTTCTCTCCATT ACCTGAGTTCTCTTTGGAGAATATACAGAAATTCCAGAAGGAGAATGAATTTCTTACAGATCGTTTATTGGCAATGGAAG AAGAAATGAAGATGCTGAAAGAAGCTTTGGCTAAACGCAACAGTGAATTGCAGGCCTCTAGGAGTATGTGTGCTAAAACA CTGAGCAAGCTTCAAAGTTTGGAACTTCAGACAAGTAACCAACAGAAGGGATCCCCAAAATCCATCATGCAAATTACCCA TGAAAACATTTTTAGTCAAAACGCAAGCAACGCACCAAGCTTGGTCTCCATATCTGAAGATGGAAATGATGATGCAGGAA GTTGTGTCGAGTCTTGGTCTACTGCAATAACATCTGGGATATCCCAATTTCCTAAAGAAAACTTCACTGAGGAATCAAGC AAATCTGAATCCATTAAGAAGTTGGAACTAATGGACGACTTTCTAGAGGTGGAGAAATTTGCTCGCTTATCAAATGATTC CAATGTACATGCCACTATTTTAGTATCTTCAGATACTAAGACAGATGACATTGTGACCAATGATGTATCAGAAGTCGGTA CTGACAAAGATGGTCTTTCTGAAAAGAATGACAACTCAAATCCATTGCCAAATCAAGTGTCTTCTGGTGCTTTGATGTCA GCACCTGGTCCCCAATCTGATGTTGGTGGTTTGTTATTAACAGAGCTCAGATCAAGAATATTACTGGTTTTTGAGTCCAT TGCTAAGGATGCTGATATAGGGAAGATTGTGGAGGATATTAAACATGTGCTAGAAGATTCACATGACACATGTGATAGGC AGGACAATCCTGAAGATGCTGGTCTGAACCTTGAAAAAGAAACCATTTTATCCCAGCAACCCAAAGAATATGTGCAGATA ACTTCTGATTTGGAAGCTGCAATTTCACATATTCATGATTTTGTTTTGTTCCTCGGCAAAGAAGCAATGGCTCTTCATGA CATATCTTCTGATGGAAAAGAAATGAGCCAAAAGATTGAGGACTTTTCTGTCACCTTTAATAAAGTTTTATGCAAAAATG CAAGTCTGTTGCAATTTGTTCTTGACCTGTCTTACGTTTTAGCTAAAGCAAGCGAATTCCGATTTGATGTCCTTGGCTAT AAACGTACAGAAGCTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTTCAAGACAC TTCATCTGGAGAAAGATATCAAAATGGTTGTTCACATGTTCTTAATCTCTGTTCTGATCCTGAGGTTCCTGATGACGGAA ATTTGGTCTCGGGCTATCAAGCGAACGCTGCATCACAGAAGCTCTCAATGGAAGAATTTGAAGAAATGAAGCTTGAGAAA GAGAAAGCAGTAAATGATCTGTCAAACTGTACTGTGAATCTTGAAATGACGAAGTCTCAATTGCAAGAAACTGAGCAACT TCTGGAAGAAGTGAAGTCACAGCTCGCTTCTGCTCAAAGGTCGAACAGCTTGACTGAGACACAACTAAAGTGCATGGCAG AGTCTTACGAGTCACTCGAAACACGTGCCCTGGAGTTTGAAACTGAGCTAAACCGGCTGCAAATTAAGATTGAAACTCTG GAGAATAAGCTTCAAGATGAAAAGAGGGCTCATGAAGCTGCTTTGGCCAAGAGCAAGGAGCTAGAAGAACAGTTACTAAG GTTAGACACCAACTAAATATCGTAAGGGATATTAATGCTGAAATTTGCATTGTTGCCCTACTAGCCTGCTATTGCTTATA GATTTATGTATTTTGTATTTATATTAATCTAACTAGGAAAATGTTGGATGAAAAGCATGGTGTTATATATTTAATTTTAT GAAAACCTATGTTCCTAGTTCTATTTCTGATTTGAGTTACTCTATCTGTCAGGTTTGAGAGCTCATCAGCTGATAATGAC CTCAAGACTCCGCAGGTAAGGATCTAATTCCACTGTGAATATAAATTACATATTGAATTTCATGTTTTCTTATATATATG AAGTGTGGGAAATTTTCATATTTTGCTAGCATGTATGGACCAACTTATATTTCTTCCCAGATGCTAGTTACAAAAGTTTT TTCCCCAATTTTGACTTTAATCAATTCTAGAAGGTTTTCCTAACACACATTCTTTTGATCGGCTGAAAATCCAATATTGA TTTTTGTTAATACAGGAGAGAGATTTGGCTGCGGCTGCTGAAAAGCTAGCCGAGTGTCAGCAAACTATATTTCTTCTGGG CAAGCAGTTAAATACTCTCTGTCCTCAATCTGAGCCAACTGAATCTCCTCACAGTAATATTAATCCCAAGTTTGAAGGCT CAAGAGTGGAAGAACCTGCTACTAGTAGCCCAAATTTTCAAAATTTTGGTCAGTTGGAGATGAACAATACTGCTACTGCA TTTGTGAAAAGACCAGGTTCTGAGTCCCCTTTGCAGTTTTCCAATAGTTTGTTTAGCCCATCGGATAACGATTCACACCT TCCAGCAAGATCTCCAGTGCAGCATTCAAAATCAAAACCAAAACACAGGCCTTCCAAATCAGCCTCTTCTTCAGCTTCTT CCGCCACTACCCCGGAGAAACAAGCACGAGGATTCAGCAGATTCTTTTCACCAAAAGGAAAACATGTTCATTGAGCTTGC AGCTCCCAGGCTCTATATGATAATTCATAGTTAGTTTTTTTGGGGAGGTTTGTGTAGTTTAACTAGGGAATGCCATGAGT GTCAGGTTATTCTTGTATGTAATGGTTGTACATGGTAACTATATGTTGTTTGTTTTCTTCTTTTCCTTTTCACTTTTTGC TGTGTAAGGCAAACAATGACATGTTGTATTTTACAAACCTATCCATACCTTAATTCTTTACTAGCAGGAATGAATACAGA TTGTTCAACCGGTTGCCATGTTTGATCTGTGATAGGTTTCACAAATATATCTTGGTTGTCTCAAGTAAAGGGTTTTGGAA AATAATCAAGTCATGTGATGTATGGTAGTCGGCAGACTAAATGTAACTACAAACTAGCTAGTTTGGCCTTTGCCATATCC CGATTAGATCCATAGGGCCAGATTCGGCTACGAAATAATTAATTTGATGTCGG
CDS sequence (LotjaGi1g1v0427500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCGGCGCTGGCCATGGAAGAAAAAATCGTCTGATAAGGCTGTGCCTGAGAAAGTAGCTGTTGCATTGGACTCCTC TGAAGCTTCCAACCAGGATAGCAGCAAGAAACCAAACTATGTCCAAATCTCTGTGGAATCCTATTCACACCTCACAGGTT TGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCAGAAGCTTGAGGATGAGATGCAGGAAATGAATGAAAAGCTTTCA GCGGCTAACTCTGAGATTGAAACCAAGGAAGGCATGGTAAAACAACATGCTAAAGTAGCTGAAGAAGCTGTCTCAGGCTG GGAAAAGGCTGAAGCTGAAGCTTTGGCATTGAAGAACCATCTCGAATCTGTCACTCTTTTGAAACTCACTGCTGAGGACC GTGCATCGCATTTAGATGGTGCTCTTAAAGAGTGTATGCGGCAGATACGGAACCTTAAGGAAGAACATGAACAGAATATA CAGGAAGTTTCTCTCTCGAAAACCAAGCAATTAGACAAGATCAAGGGGGAACTTGAGGCTAAGATAGTTAACTTTGAACA GGAACTCCTTAGGTCTGCTGCTGAAAATGGGTCTTTGTCAAGATCCTTGCAGGAGCGCTCTAACATGATAGTCCAATTAA GAGAAGAAAAAGCTCAGGCTGAGGCGGAAATTGAGCATCTTAAGAGCAACATGGAATCGTGTGAAAGAGAAATTAATTCA CTTAAATATGAACTTCATGTTATTTCCAAAGAACTGGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGA AGCTGCTAACAAGCAGCAAATGGAGGGCGTGAAAAAAATTGCCAAGTTAGAAGCTGAGTGCCAAAGATTACGTGGTCTAG TGCGGAAGAAGTTACCTGGTCCTGCTGCACTTGCACAGATGAAGCTAGAAGTTGAAAGTCTTGGCCGAGATCATGGAGAA AGTCGATCAAGGAAGTCTCCTGCGAGGCCTGCTTCCCCTAATTTCTCTCCATTACCTGAGTTCTCTTTGGAGAATATACA GAAATTCCAGAAGGAGAATGAATTTCTTACAGATCGTTTATTGGCAATGGAAGAAGAAATGAAGATGCTGAAAGAAGCTT TGGCTAAACGCAACAGTGAATTGCAGGCCTCTAGGAGTATGTGTGCTAAAACACTGAGCAAGCTTCAAAGTTTGGAACTT CAGACAAGTAACCAACAGAAGGGATCCCCAAAATCCATCATGCAAATTACCCATGAAAACATTTTTAGTCAAAACGCAAG CAACGCACCAAGCTTGGTCTCCATATCTGAAGATGGAAATGATGATGCAGGAAGTTGTGTCGAGTCTTGGTCTACTGCAA TAACATCTGGGATATCCCAATTTCCTAAAGAAAACTTCACTGAGGAATCAAGCAAATCTGAATCCATTAAGAAGTTGGAA CTAATGGACGACTTTCTAGAGGTGGAGAAATTTGCTCGCTTATCAAATGATTCCAATGTACATGCCACTATTTTAGTATC TTCAGATACTAAGACAGATGACATTGTGACCAATGATGTATCAGAAGTCGGTACTGACAAAGATGGTCTTTCTGAAAAGA ATGACAACTCAAATCCATTGCCAAATCAAGTGTCTTCTGGTGCTTTGATGTCAGCACCTGGTCCCCAATCTGATGTTGGT GGTTTGTTATTAACAGAGCTCAGATCAAGAATATTACTGGTTTTTGAGTCCATTGCTAAGGATGCTGATATAGGGAAGAT TGTGGAGGATATTAAACATGTGCTAGAAGATTCACATGACACATGTGATAGGCAGGACAATCCTGAAGATGCTGGTCTGA ACCTTGAAAAAGAAACCATTTTATCCCAGCAACCCAAAGAATATGTGCAGATAACTTCTGATTTGGAAGCTGCAATTTCA CATATTCATGATTTTGTTTTGTTCCTCGGCAAAGAAGCAATGGCTCTTCATGACATATCTTCTGATGGAAAAGAAATGAG CCAAAAGATTGAGGACTTTTCTGTCACCTTTAATAAAGTTTTATGCAAAAATGCAAGTCTGTTGCAATTTGTTCTTGACC TGTCTTACGTTTTAGCTAAAGCAAGCGAATTCCGATTTGATGTCCTTGGCTATAAACGTACAGAAGCTGAAACTAACAGT CCTGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTTCAAGACACTTCATCTGGAGAAAGATATCAAAATGG TTGTTCACATGTTCTTAATCTCTGTTCTGATCCTGAGGTTCCTGATGACGGAAATTTGGTCTCGGGCTATCAAGCGAACG CTGCATCACAGAAGCTCTCAATGGAAGAATTTGAAGAAATGAAGCTTGAGAAAGAGAAAGCAGTAAATGATCTGTCAAAC TGTACTGTGAATCTTGAAATGACGAAGTCTCAATTGCAAGAAACTGAGCAACTTCTGGAAGAAGTGAAGTCACAGCTCGC TTCTGCTCAAAGGTCGAACAGCTTGACTGAGACACAACTAAAGTGCATGGCAGAGTCTTACGAGTCACTCGAAACACGTG CCCTGGAGTTTGAAACTGAGCTAAACCGGCTGCAAATTAAGATTGAAACTCTGGAGAATAAGCTTCAAGATGAAAAGAGG GCTCATGAAGCTGCTTTGGCCAAGAGCAAGGAGCTAGAAGAACAGTTACTAAGGTTTGAGAGCTCATCAGCTGATAATGA CCTCAAGACTCCGCAGGAGAGAGATTTGGCTGCGGCTGCTGAAAAGCTAGCCGAGTGTCAGCAAACTATATTTCTTCTGG GCAAGCAGTTAAATACTCTCTGTCCTCAATCTGAGCCAACTGAATCTCCTCACAGTAATATTAATCCCAAGTTTGAAGGC TCAAGAGTGGAAGAACCTGCTACTAGTAGCCCAAATTTTCAAAATTTTGGTCAGTTGGAGATGAACAATACTGCTACTGC ATTTGTGAAAAGACCAGGTTCTGAGTCCCCTTTGCAGTTTTCCAATAGTTTGTTTAGCCCATCGGATAACGATTCACACC TTCCAGCAAGATCTCCAGTGCAGCATTCAAAATCAAAACCAAAACACAGGCCTTCCAAATCAGCCTCTTCTTCAGCTTCT TCCGCCACTACCCCGGAGAAACAAGCACGAGGATTCAGCAGATTCTTTTCACCAAAAGGAAAACATGTTCATTGA
Protein sequence (LotjaGi1g1v0427500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRRWPWKKKSSDKAVPEKVAVALDSSEASNQDSSKKPNYVQISVESYSHLTGLEDQVKTYEEKVQKLEDEMQEMNEKLS AANSEIETKEGMVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDRASHLDGALKECMRQIRNLKEEHEQNI QEVSLSKTKQLDKIKGELEAKIVNFEQELLRSAAENGSLSRSLQERSNMIVQLREEKAQAEAEIEHLKSNMESCEREINS LKYELHVISKELEIRNEEKNMSMRSAEAANKQQMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDHGE SRSRKSPARPASPNFSPLPEFSLENIQKFQKENEFLTDRLLAMEEEMKMLKEALAKRNSELQASRSMCAKTLSKLQSLEL QTSNQQKGSPKSIMQITHENIFSQNASNAPSLVSISEDGNDDAGSCVESWSTAITSGISQFPKENFTEESSKSESIKKLE LMDDFLEVEKFARLSNDSNVHATILVSSDTKTDDIVTNDVSEVGTDKDGLSEKNDNSNPLPNQVSSGALMSAPGPQSDVG GLLLTELRSRILLVFESIAKDADIGKIVEDIKHVLEDSHDTCDRQDNPEDAGLNLEKETILSQQPKEYVQITSDLEAAIS HIHDFVLFLGKEAMALHDISSDGKEMSQKIEDFSVTFNKVLCKNASLLQFVLDLSYVLAKASEFRFDVLGYKRTEAETNS PDCIDKIALPENKLVQDTSSGERYQNGCSHVLNLCSDPEVPDDGNLVSGYQANAASQKLSMEEFEEMKLEKEKAVNDLSN CTVNLEMTKSQLQETEQLLEEVKSQLASAQRSNSLTETQLKCMAESYESLETRALEFETELNRLQIKIETLENKLQDEKR AHEAALAKSKELEEQLLRFESSSADNDLKTPQERDLAAAAEKLAECQQTIFLLGKQLNTLCPQSEPTESPHSNINPKFEG SRVEEPATSSPNFQNFGQLEMNNTATAFVKRPGSESPLQFSNSLFSPSDNDSHLPARSPVQHSKSKPKHRPSKSASSSAS SATTPEKQARGFSRFFSPKGKHVH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1064 | 1064 | 0.0 | – | |
| PANTHER | 1 | 1064 | 1064 | 0.0 | – | |
| Coils | 51 | 92 | 42 | - | – | |
| Pfam | 89 | 945 | 857 | 0.0 | ||
| Coils | 135 | 166 | 32 | - | – | |
| Coils | 168 | 195 | 28 | - | – | |
| Coils | 203 | 269 | 67 | - | – | |
| MobiDBLite | 314 | 337 | 24 | - | – | |
| Coils | 346 | 380 | 35 | - | – | |
| MobiDBLite | 517 | 553 | 37 | - | – | |
| MobiDBLite | 534 | 552 | 19 | - | – | |
| SUPERFAMILY | 783 | 943 | 161 | 4.9E-6 | – | |
| Coils | 805 | 839 | 35 | - | – | |
| Coils | 847 | 902 | 56 | - | – | |
| MobiDBLite | 942 | 956 | 15 | - | – | |
| MobiDBLite | 942 | 977 | 36 | - | – | |
| MobiDBLite | 991 | 1019 | 29 | - | – | |
| MobiDBLite | 991 | 1064 | 74 | - | – | |
| MobiDBLite | 1032 | 1050 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0427500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…