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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0428000 |
| Transcript ID | LotjaGi1g1v0428000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endoglucanase; TAIR: AT1G75680.1 glycosyl hydrolase 9B7; Swiss-Prot: sp|Q8LCP6|GUN10_ARATH Endoglucanase 10; TrEMBL-Plants: tr|V7AV20|V7AV20_PHAVU Endoglucanase; Found in the gene: LotjaGi1g1v0428000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92260648..92265665) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAATTAGAAGAAAAAAAGCATAATTAGGGTGGTTGTTAAAGATGAAGGGTCCTTCTCACTCAACTCTTAACCGCCAG CTAGTCTACGGTCCAAATCAACAACAAAAGCCCACCGACAAAGATGGCCTTACCCATCTGTTGACTCCCTCCTTTTACCT TTATACCCTCATAATCCACCGACACAACCAACTTCACAAGGGTACTCTCGTCATTTAAGAAAACAACAGTACCTACCTAC CTCCAAATCTAGAGACACCACCACAGATATTCTCCCGCCACCATTCCCACTGTATTCTCTCCCCCAATCTCGCCGCTATC GGGTCGGGTCGGGCATTGCATTTTCCGGGTAAGATCCAACACCACAGTGTACTACGTTGTCGGTGACGTTCTGTATTTGT CGATTTCTGACATTTACAACAACGATCTGAAACCACCCTGTTTCCAAATATAGCTATTGTCGTTGTCATTCGCTGTTGCG TTTGCTGAATCATTTTGTCTCTCTAGGAAGTGCTGCATTTTGAGCTGGTTCACGAGCAACACCAATGTGTTGAATTTGAT TTTATAGATCCAGGCCCCAAACTCTGTTGCGGTTTGAACTTTGCATAATGGGGCAGAAATCGAGGTCCAAAGGGTGCTGC GGTTGGTTTGTGGCGGTTCTGATTCTGGCTCTCGTCATCGGCGCCATCGCTTACACCATTAAGAAGAAGTTTGGTCACTC TGACTCCGATAACCCAGCTCCGGTTCCTGGTCCACCCGGCGCCATTGACCACAAATATTCCTCTGCACTCAAAACTGCAA TGCAATTCTTCGATATACAAAAATGTAATCTCTCTTACCATCTATATATAGATCACCTTTAAATGTTCATTATTGCAAAT TTCATGTTCTATATAGTCAAGCCTGGGTTTGAGTGGTGTGTTAAGGTCCCACATTGACTAGAGTTAGACCTAGTTCAAAT TCGAATATGGTATTAGAACATATCTAGATTTGTTACCATCTATATATGGATCACTTGTAAATGTTGATTCATTGAGGGGT GTGTTAAGGTCGCACATTGACTAGAGTTAGGTCTAGTCCAAATTCGAAGACACTTGTGCGATTTTTTTTTTGGGTTTGAG AGGTAAATCTGCTAGAGACAATAGGTGTGTTTAATGCTGCATAATATGCATATGATTGGTGTTCGTTGAGTTAACGGTCA TGTTTCCTCTTGCAGCTGGCAAGTTAGTTAACAACAAAATAAGTTGGAGAGGGGATTCAGCTCTAAAGGATGGAAGCCAA GCGAAACTGGATCTATCAAAAGGAATGTATGATGCTGGGGATCACATGAAGTTTGGTTTTCCCATGGCTTTTACTGCCAC GGTGTTATCATGGGCCATTCTGGAATATGGAGATCAAATGGACGCTGTTGGCCAGTTGGATCCGGCACAAGATTCGCTGA AATGGATCACTGATTTTCTTATCAACGCTCACCCTTCTGAAAATGTTCTTTATATTCAGGTTACTGTACTTTTCAACTTC CATTTGATGCTAGCTTTCTCTGTAAGTTAGCTAGATTGCATGCATAAATAATATTTCTTTTCTGCTTATAAGGACATCCA CACACACTCTGTACTTCATAATAATTCTTGGAATGTTTTCTATAGTTAAACTACAGGATCCGACTTAGATCCATTGATTT TGTAAAAATAATTAAATGATGTGGTACTACCTGTTCATATGATGTGACTTTCAGTGATGTAGTGCTACCTGTTCAAAATC AATTAAATGCTTTAACTAGATGTTTAAAATGTCTCTTAGTTGTAAGTTATGACAATGAAGTGGCACATTCTTGTTTCTTT ATGGTGAAAAACTACTGCCTTAACAGTTGGTCTGATTTAAAATCAAAAGTATATTTGTTGTTCTTCCGGGATTGGTTTTC TATTTGTAAGATTATTGGTATATTTGTGGTATTAAGGAAAGACCATGTGATTAGATAAGTGATCTTGTACCGGGAATTCT ACTGATATGTGATATTATAGACTTCCTTCTATTTTATTTCCCTTTATACTTCCTGTCTTTTTTGTATGTGCATATGGTGA TCGAGTAACTCCAGATTACTATTTGTCCTCTCCATGTTCAGTCACTTCAACCTTTTTCTTTTGTTGTATTAGGACTGTCA GGCTTTTAACGAGTTTAATTTATTAAAATTACCGTGGCAGGTGGGTGATCCTGTTGCAGATCATAAGTGTTGGGATAGAC CTGAAGATATGACGGAGGAGCGGCCACTCACGCAAGTGAACGCGTCTTGTGCCGGATCAGACGTTGCAGCTGAAACTGCA GCAGCCATGGCATCAGCATCGTTGGTCTTTAAAAAGACTAATTCTACTTATTCAAGCACTCTTCTCAAGCATGCAAAACA GTTGTTTACGTTTGCGGACAAGAATAGAGGATCTTATAGTGAGAATATACCTGAAGTCGCAACGTATTATAACTCAACTG GATATGGTGATGAGCTCTTATGGGCTGCTAGTTGGCTGTATCATGCCACAAATGATGATTCTTACCTTGACTTTGTGGTT GGCCAAGATGGAGAAGACTATGCTCAATTCGGAAGCCCAACCTGGTTCAGTTGGGACAACAAGCTTGCCGGAACTCAGGT ATCAGTAAATGCTCAATCTTTTATCCCAGTTTCTAATTTGTGATTTTTAACAACGGAAGATTATCATTAGAGTTATGAAT GTTGCTAATTGCTATAGGTAATGGTTTTTATATTTTTATTTTATTTCAACCTCCACATCACACAAATAGTCAAAGGACCT CTTGGCTTAAATTTATTTCTTCAGATCAGAGTAGATCTTTTTTTTTTAACGTCCAATGCAAGCTATTATTCAACCGATAA AGGAAGCAGTAGAGCTGAATCAAGGCTTGTGGCATTCTCTTATCCTCAATTAATATATGTATGAGTGAACATATAAAGGA AAGCGAGTGCTCTTTCATGTAACAACGAGATTAGTAAATTTTGATCATTAGATCTATCTATGAAAGGTCAAGATTAAAAT ATAAAGTCATGTAACTGTATGACCAATGTATGGTTGTGCAATCAATATTTAATACTCTCGTTTCTCACAATTAGAACACT TTTCACTCGATATGCCCCATACATATGAGATTACTAATGTATTCCCATTTGTTTTTAGAATAAGAATATTAGCAATATTT TCAAGTTCAAAATGTAATCAGGCTGTACTTCTAAAATAGAAGTGGGGCCCTTAGGTACTCCCATTTGTATTTTAGGAGTA TGTTAGTAACCTGCATCTTTACAAATGCGAAGTGTTAAATATATATTTCCTTTCCTTTAGTAAATATGCCTTCTTTGTGC AGGTTTTGTTATCCAGATTAAGCTTCTTTAAGAAGGACCTTTCAAATTCACATGGCTCTGGCCTGCAAAGTTACAGGAAA ACTGCTGAGGCTGTGATGTGTGGCCTTCTTCCAGAATCTCCAACAGCCACAAAAAGCAGAACAGATAGTAATTTTCTCGT TGAATGCTATATCATATAACTGGATTCTCGCATCTATAATCTTCTCTATTTCTATCTCCTCTGCCCCAACTAAAATCAAT AGTTTTAAACAATTGAACCCCCAATTTTAGAAATATTTTTCTACGGCTATGCATATATGTTCTATAATTCGCTTTTTATT TTTCTTACACAGATGGTCTTATATGGGTGAGCGACTGGAACTCTCTACAGCAACCTGTTGCTTCTGCATTCTTAGCTGCT ATTTACAGCGACTATATGCTTACATCGCGGACTCCGAAACTAAAATGTGATTCAGATTCCTATACCCCAGCAGATCTTCG GGACTTTGCCAAATCCCAGGTATGCATTCATTATTATTTTCTTTGCACTGAATATCAGCTTGGAGTGATCCACGTCCAAA TTGAAAAATCTATGTTATACTTCTAGGCTGATTATGTATTGGGCAAGAATCCTATGGATATGAGTTTTCTGGTGGGATAT GGAGATAAGTTCCCACAATTCGTGCACCATAGGGGGGCTTCAATCCCTGCTAACGCGAAAACCGGTTGCAAGGACGGCTT CAAGTGGCTTGATTCGACTGATCCCAATCCCAACGTAGCTACTGGAGCACTTGTTGGTGGACCCTTCTTGAATGACACTT ACATTGATTCCCGGAACAATTCCATGCAAGCAGAACCAAGCACATATAACAGTGCTGTCTTAGTTGGCCTTCTATCCAGC TTGGTCACAACATCTTCTGCCCTTCAGTCCTTTACCTAAGTTGCAGCTTCCTCTCCCTCCGCAATTGCAATAAAGGTTGA CAAAGATTGGAGTTTTATAGCTTTATTCATTTCCTGATCCTCATAAATGAAAGGTACTAAATATATGAAACATGATATTG TCACAATCATACGCTTGGTTGTATCATGTATGGGTGTAGATCATGGTGTCTGAATAGGTTAGTGCATGTTGTTCGTAAAA TTCTAAAGCCAGAATCAAGTCTGCAAAGAAGCTTCTTTTGAGAGTAACTTCTGGGTTTCACAGTTGATTCTGAAGAAAAA GATGATCTGAATATGCTATTAGTCGTTAAGATATTTGGGTGTAGTTTAATTTTGGGTTGTTACCTCACCAGCTCTGATCT ATTTTGTTGTACTTGTTTGTAGAACATCTGATGATGTGATCACATTATTAATCTTCGATTGTCATTTGTTGTACACAAAA CCATCCTACCCCACTGTATATATTTTCCTGTCATTTTTTATTATTATTATTAGATTGTGATGATGTGGTCATAGGGACTA GATCTTGAAGGTAAGAAAAACTTTTAAAAACTGATCCAGCTCAAGTGAGTGAGTGATCTGAATGCATAAAGGTAGAAAGC TTCATGTCTGAGACCCCAGAATTTGGATTTTCAATGAAACCACGTTTTAGGTTCATCATATATTCGTGAACTTTCAACAT GTCAATGATTTCGTTTCCTTTTCTCATAATTCATAGAGGGAGTTCATACATTGAACTT
CDS sequence (LotjaGi1g1v0428000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGCAGAAATCGAGGTCCAAAGGGTGCTGCGGTTGGTTTGTGGCGGTTCTGATTCTGGCTCTCGTCATCGGCGCCAT CGCTTACACCATTAAGAAGAAGTTTGGTCACTCTGACTCCGATAACCCAGCTCCGGTTCCTGGTCCACCCGGCGCCATTG ACCACAAATATTCCTCTGCACTCAAAACTGCAATGCAATTCTTCGATATACAAAAATCTGGCAAGTTAGTTAACAACAAA ATAAGTTGGAGAGGGGATTCAGCTCTAAAGGATGGAAGCCAAGCGAAACTGGATCTATCAAAAGGAATGTATGATGCTGG GGATCACATGAAGTTTGGTTTTCCCATGGCTTTTACTGCCACGGTGTTATCATGGGCCATTCTGGAATATGGAGATCAAA TGGACGCTGTTGGCCAGTTGGATCCGGCACAAGATTCGCTGAAATGGATCACTGATTTTCTTATCAACGCTCACCCTTCT GAAAATGTTCTTTATATTCAGGTGGGTGATCCTGTTGCAGATCATAAGTGTTGGGATAGACCTGAAGATATGACGGAGGA GCGGCCACTCACGCAAGTGAACGCGTCTTGTGCCGGATCAGACGTTGCAGCTGAAACTGCAGCAGCCATGGCATCAGCAT CGTTGGTCTTTAAAAAGACTAATTCTACTTATTCAAGCACTCTTCTCAAGCATGCAAAACAGTTGTTTACGTTTGCGGAC AAGAATAGAGGATCTTATAGTGAGAATATACCTGAAGTCGCAACGTATTATAACTCAACTGGATATGGTGATGAGCTCTT ATGGGCTGCTAGTTGGCTGTATCATGCCACAAATGATGATTCTTACCTTGACTTTGTGGTTGGCCAAGATGGAGAAGACT ATGCTCAATTCGGAAGCCCAACCTGGTTCAGTTGGGACAACAAGCTTGCCGGAACTCAGGTTTTGTTATCCAGATTAAGC TTCTTTAAGAAGGACCTTTCAAATTCACATGGCTCTGGCCTGCAAAGTTACAGGAAAACTGCTGAGGCTGTGATGTGTGG CCTTCTTCCAGAATCTCCAACAGCCACAAAAAGCAGAACAGATAATGGTCTTATATGGGTGAGCGACTGGAACTCTCTAC AGCAACCTGTTGCTTCTGCATTCTTAGCTGCTATTTACAGCGACTATATGCTTACATCGCGGACTCCGAAACTAAAATGT GATTCAGATTCCTATACCCCAGCAGATCTTCGGGACTTTGCCAAATCCCAGGCTGATTATGTATTGGGCAAGAATCCTAT GGATATGAGTTTTCTGGTGGGATATGGAGATAAGTTCCCACAATTCGTGCACCATAGGGGGGCTTCAATCCCTGCTAACG CGAAAACCGGTTGCAAGGACGGCTTCAAGTGGCTTGATTCGACTGATCCCAATCCCAACGTAGCTACTGGAGCACTTGTT GGTGGACCCTTCTTGAATGACACTTACATTGATTCCCGGAACAATTCCATGCAAGCAGAACCAAGCACATATAACAGTGC TGTCTTAGTTGGCCTTCTATCCAGCTTGGTCACAACATCTTCTGCCCTTCAGTCCTTTACCTAA
Protein sequence (LotjaGi1g1v0428000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGQKSRSKGCCGWFVAVLILALVIGAIAYTIKKKFGHSDSDNPAPVPGPPGAIDHKYSSALKTAMQFFDIQKSGKLVNNK ISWRGDSALKDGSQAKLDLSKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDAVGQLDPAQDSLKWITDFLINAHPS ENVLYIQVGDPVADHKCWDRPEDMTEERPLTQVNASCAGSDVAAETAAAMASASLVFKKTNSTYSSTLLKHAKQLFTFAD KNRGSYSENIPEVATYYNSTGYGDELLWAASWLYHATNDDSYLDFVVGQDGEDYAQFGSPTWFSWDNKLAGTQVLLSRLS FFKKDLSNSHGSGLQSYRKTAEAVMCGLLPESPTATKSRTDNGLIWVSDWNSLQQPVASAFLAAIYSDYMLTSRTPKLKC DSDSYTPADLRDFAKSQADYVLGKNPMDMSFLVGYGDKFPQFVHHRGASIPANAKTGCKDGFKWLDSTDPNPNVATGALV GGPFLNDTYIDSRNNSMQAEPSTYNSAVLVGLLSSLVTTSSALQSFT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 527 | 527 | 0.0 | – | |
| PANTHER | 1 | 527 | 527 | 0.0 | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 12 | 31 | 20 | - | – | |
| Phobius | 32 | 527 | 496 | - | – | |
| Gene3D | 51 | 522 | 472 | 2.5E-160 | ||
| SUPERFAMILY | 54 | 519 | 466 | 6.12E-151 | ||
| Pfam | 57 | 513 | 457 | 1.8E-134 | ||
| ProSitePatterns | 420 | 446 | 27 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi1g1v0428000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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