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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0432700 |
| Transcript ID | LotjaGi1g1v0432700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin; TAIR: AT5G49480.1 Ca2+-binding protein 1; Swiss-Prot: sp|Q2R1Z5|CML6_ORYSJ Putative calmodulin-like protein 6; TrEMBL-Plants: tr|A0A1J7G4K4|A0A1J7G4K4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0432700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:92749818..92758162) extracted from Lotus japonicus Gifu genome v1.2.
CTTCGAATCTCATTCATGCGCGTCCAAATTTAGTGGGGCCCAAAACTCTCTTAGCCCAAAGAATTCACAAAATTCTCCCC TCTATTTAACACGCATAAATCTCAACACAACCACAAACGCTGAAACCAAAAACCCAACGTCTCTGTTTTTCCTTCAACAA TCAAAACAACACAACACAACACGATGTGTCCTTCTGGCAGGAGCCTCCGCTCTAACGCTTCTTCTTCCTCGTCCTTGTCC GCCACGTCAGATTTCCGACCGGCATTTGACGTCCTGGACGCAGACTGCGACGGCAAAATAAGCCGCGACGACCTCCGCGC CTTCTACGCTGGCATTTACGGCGGCGTCGCCAGCGGAGACGATGTGATCGGAGCGATGATGACGGTTGCGGACACCGACA AGGACGGGTTCGTGGAGTACGAGGAGTTCGAGCGCGTTGTCACAGAAAACAATAAACCTTTGGGGTGTGGGGCCATGGAG GAGGTGTTCAAGGTGATGGACAAGGACGGTGACGGCAAGCTCAGCCACCATGATTTGAAGAGTTACATGGCTTCGGCTGG GTTCTCCGCCACCGATGAGGATATCAACGCCATGATCAAGTTCGGCGGCGGCGATTTATACGGCGGAGTGAGTTTCGAGG GTTTGATTCGCATATTAGCTCTTGATTATTCCGTCGCTAATTAATTAATTAATTGGTTAAATCCCATGAATTACATAATG TGAGTCCAGCCAAAATGGTTTTTTTGTATTGGATTATTATATTGCTCTCCAAGGTTTATTTATGTGTAACTGGGATATGA GCTTCACTTTTTTGATCAATAAATTTCAATGTAACTTTGAATTTGATGATATGATAACCATACATGTAATTCAAATTATG TTTAGAACTCTGTATTGCATAGAACTGTTGTCGACAGCCAATTTGTTTGGAATAGAACAGTGTAATAGGAGCCACCGCTG GCATAACAAAAGTCAAGGTAAATTGACCACTAAACATGCGTTGAACGATTTATGGTATATTCCTTTTTTTATTTTCCAAT TGGGTACAGTTTACAAAAGACAAATTGACAACCAAAAGTAAGACTTTACAGCCAAAATCAATTGCAATATTGTAGGAGCA TATATGCTGAGATGGGTCCTTATGTGGTGGTTCAGTCAAAGAAGGTCCACCACTACCCGTGAAAGCATTCTTACCACATG TTATTACCAAGGTATTTAACATGACTTCTTGCACTTTGGCCTATAACTATTATTATTGCAGAATGGTCCCTGCATTTATG TGGCTATTATGAATTTGGATGAAGATCCTATTTTCTCATTTAATTTCTTATTCTTTGTCTCACCAGGCCAATTAAATTGC TTTTACTATTTAGTGTCTCATTCTATTATTCATTCTGCTTCCCATTCTCTATTATTGTTTTCTCATATGTACGTAGGAAT AACAATGGTACTGACTACTGAGCAATGTATGTTGTTTTTAAATTCTACTTAACAATGTTGTTTTTAAAGCAACGACCTCT TGCTGTCTAAGTTATCAAGTTAACTTCTACTCTTTTAGGCAACTGTCTCAACATATAAAACTAATTTGTTAGAATTGAGT CAAGTCCGCCTTACTGAGGTCGAAGCTGTGATGCTTTTTAAGTGATCGACTTGATGGCTAACAGTTAACCGCCGCTGCAA TTGATCCAACCATTTTAGATATCATTTTAACAACATAGTAAGTTACATACAACTCATTTTGCTCTTTTACTCTGATTTTG AGTTGATTTAAGTGTTAGTGTGTGTTTTGCAAGTATCTCCTTTGTTGTGGATATCCTTTGCTCCACTGTCCTTACCACCA AGCTTACAACCGTACATTTTGTCCAGCATTGTCACGCTCCTTCGAAGAACCACCCTATTCATATTCTGAAAAAATTTATA TATAAATGTAGATTCTTCGTGGAACATTCTAACCATTTCACATTTGGTGGAACATTCTAACCATTGCACATCACATGCTA TGTAGCTACGTTGTTGAATCATAGAATGCCATTTGATTATTGAAAGGAAGAATGAGCACTTTCACATTAGGTTCCAATGG TGACCATAAAAGATGTGGAAGAGACATGAACTAATTGAAAATGTTAGGATATCTTACACACAATGAATTATCAGGACATA AAAAAAGATGGACCAGGAGAGAGCCCTTTTGATGAAGAGGTGATCCAGTCCAATTATCTACCGCCTCTGCATTCGAATAG CAGGCTTCCTTGTGCTAGCCCAGCTATATAAGGTTCACATGAGAGTCCACACACTACAAGAAAAAACACTTTTAGCGACA CTTTTTTTGAGGCAATAACACTATTGCCGCTACTTTAATAAAAAAATAAAAAAATTTGTGCTTAACAATGAGTAGTCGGT AATAATCTCATGTTTAACGGTAATTGGGGACTAAAGCCACCAATGAAAGACCCACTCTCACGAGCAGAATGAATAGCTCA CATTTCCACTCGAAGCCACCACTGTCCCCTCTCACCGAAGCCACCACCGTCCCCTCTCTCACCGAAGCCACCACCGTCCC CTGAAACCTGTTCGTGTGAAGGCGAGAACGACAAGGAGATCGCACGAAGGTTCTCTCCCTTTCTCGATCTGGAATCTCCA CTCGAAGCTTTGATTCTCTCCACAACATTGTTAGGCTGTGATTTTTCTTCTCATTCTGAGCTAGGGTTTTGAGTTTTGAA CTGAATCTGAAACAGTGTGAAGTGAAGCTGTGGGATTATATGTTCAAGCTATGTTGATCAACGATTTGGGGATTATCGGT GAGAAATTTAACATGTTTTTTGATCCATTGCTTTTACTTGATTATCTGTGAGAAATTTAACATGTGTAGAAGCTTAATGC GTTTTGATTCTAATGAATTTGTTCATAGCAAATGCTCTTCTACTGATTTGTCTGATTTGAATTCTAGTTATTCGTTCATA ATGGGTCATCAGAAGTATGCATCTCTTTTAGCCTCTGCAAGCTTGGGTGGTAATTCCTCTTTTATAAATTTGGGCTAAGG GTTCCTTTTAGTGATTTCAAGACTAACATTTTAGCCTTTGTCTGCATTTTAGCCTTTTTACTAGCCTTTGTCTGGCGCGG TTTGCATTATTTTTGTTAAGCTAGCTAGGGTAATATAGGTTGGTGTGAACTGTACTGAGATCAACAGTTCAGATACCGTT AAGTAACCTTTTTGCTGCATAGAGCTTTTTGGTAATGAAAGCTGAGTACTAAAAGTCATTTGAAGCCAACTGCTGAGTGT GCCATCATAGATATTAGCATATTTCAATTCATTCTGTTTGGTTGGCAAGCATATGAAAACTACATATTGAATTGCACAAC CCCACTAGAAATACCAAATGGAAAGCAAAGTTTTCAAGGCCATGTTAACTTGCATGATGTCAAATTTATGGCCAACCCAA CTAAAAAAATTTAAGTCAATTCAAAAGGTATGTAAAGCATTATCAATGTTATCTGCTTCCATAATGCAACTTGGCCTAAA ATTTAAGCCATTCCAAAAAGAAAGACAGTGGCACTATTGAATGCAAAAGTGTAGTAAGTAAATATTGCTGAATATTAAAG TAGTGAACTGCACTTTTGATACAGTCTTTGAGTTCTAAAAATCGTTTGTAAGAGTGGTATACTGAACTTTACATACTGAC TTTGACAGATATTAAGACTAACGAGTTTCATGAAAGAAATGGAGGTTACTGGCAAGATAAAAATGCTAATTTAATCGCTT TCCGACCACTAATTGTTCTCCTAATTATAACTGCTTTGTGGTTGGCTGCAAGTTAAACCTTTAACTTTGGCAGGATACTT TCAGGGAGGAAATTTGTGGTTGGCTGCAAGTTTGTGAGGGCCCTGTCATGCTACATCATATATTTTCTAGTCACTCTTCT AAGTTCTAACTACATACTCTTGTTATGTAGGTCCTTAATGATAAAGGCTATGATGAGGCCACTGCATACTTGTGGTCTTG TAGGGTGATTCTCTTTGTATTGGTTGCAGGTTAGTTGTCTAATCTTTGTAAATGGAATTGTCTTGCAGATAATGATTAAT GTGAGTACTGACCTTATAGTGTAAGCTACTGCTTAATCATGGTTGCAACTCTGATAAATTATGTATGATGTATGTTCAAC CTCAGTTCTTACTTCTTACTAGGCATGGTTCTTTTAAATGCATTTTTTTAAACCAATCGCCAAATGATATTGTCCATGCT TGGATCTTTGTGAACGGGGCAAAAAAGGAGTGGGGTGTGATGGTTTCATATAACAACTTGCCATGCTTAGAAATGGCACT GTAAACAGGATAGGAATAGTAGGAAGCTTATAATCAATTTTCCTAAGTTGTTGCTGCTTTATTCCATTTATTCAATTTCA ATGCTATCATTTTAGGTGCATTTTTATGTTCATTACTGCCTGACAGAATATGATCTGCAGGTGATTCGCTAGATAGAGCA CCATCAGGAACAGTCCATTAGAGCTTAATCTTAATACACCACAACCAAGTCTATTGCTTCCTATTCTTTCCCACAGCCAG ATAAAAGTAGTAATTTGGAATCTTCTGGACTTTTAGAAGAGAAGGTTAGTTCTATACCCCTAAGCATGATGTTAGAAGAG AAGGTTAGTATTTTACATGTAATTTCTCTTGTAATATAAACTTTAGAACATGAATGCTCCCTTGCTTCTTGACAGACATA TCATGGACAATCCTAGAAGTAGAATGTGGATGGACTATGATAGAGTTAGTAAAGAATATTTAGATGGAGTGGAATCATTT TTAGACCATGCATTTCGGGAGAGCAATGGAGAAACAATTCCATGCCCTTGTAAGAAATGTGTGCTACACTATGTAGTTAA TCGAGCAATGGCTTATGAACACCTAATGGTTAATGGTATTATACCATCATATGACACTTGGTTTTGTCATGGGGAGTCAA TTAATGTGCTAAATCGCAAAGAGGAAACTAATTGTAGAGAAGAAGCTTTTAGAGGTGATGATATGGTAGGGTTGATACAT GATGCTTTTGAAGGCTTTAATCAATCCATGGGTAATAACATTAGTGATGGAGGTGATATTGAGTCAAACTTGGATGAAAA TCTTACTCATACATCAAGAAATCAATCTCATCCAGAGGTGGAGAAGTTTGAACAGTTAATGAAAGATGCAAATGAAGAAC TGTACAGTGGTTGCAAGAAATTCAGCAAACTTTCTTTTGTTTTACATCTTTACCATATAAAAAGATTGTTCAAATGGACA AATGAGTCTTTTGATGCTTTGCTTGGGCTATTGAAAGATGCATTGCCTGAGGGAGAAAAGTTACCTTCTTCTCATTATGA GACCAAAAAAATAGTTGGGAGGTTGGGCTTAAAGTATGAAAAAATCCATGCTTGTCCAAATGATTGCATGCTTTTCAGGA ATGAATTGGCGGATAAGAATGTTAATAAATGCATAAAATGTGGGGCTTCTAGATGGAAAAATGATGAGAAAAAAGTTCCT GCCAAGGTCCTAAGATATTTCCCTCTAAAGTCAAGGTTGCAGAGATTGTTTATGTCTTCAGAAACTTCTAGACTGATGAG ATGGCATGATAAGGGGCGCAATAAAGATGGGGATTTACGGCATCCTGCAGATTCTGAAGCCTGGAAAAAATTTGATGACC AACATCAGGAATTTGCTAAGGATTCTCGTAATGTCCGCTTGGGATTAGCTAGTGATGGCTTTAATCCATATAGTTCAATG AAAGTTTTTGATAGTACATGGCCAGTTATTTTAGTTCCGTATAATCTTCCACCATGGTTGTGCATGAAGCAAGATTGTCT TTGATAATTGTTTAATCCTTAATGTTTAGGTTAATGATTTAGAGTCTACATTTGATATCTCAAAAGACCTAAAAGCCCTT GCACAAGGACCAAGCTACATAGCAAGAAGATTCAAAGCATTTGATGTAAATAATGGGTATCGATTTAGAACAAAAAAATA TGAAGAGTTCAGGAAGACGCAAAATAGTGGCGTCATGGTTGTTTCTAAGACAGAAAGTTATGCAAGTACAAGTGATAATG CTCCAAAGTCAGCAAATGTAGTCTATTATGGAAGATTGAGTGATATAATAGAGTTAGATTACTTTGAAGAATTTAAGGTT GTCTTATTTAAATGTGATTGGGTTGATGTAACCCGAGGTAGAGGTCTTAAAGTAGATGAATGGGGTTTTACACTTGTGAA CTTCTCTCACCTAATACATTATGGAGATCGTGAAAGTCATGAACCTTTTGTATTTGCAAACCAAGCCCAACAAGTGATAT TTGTGCAAGATCCTCATGATCATCATTGGTTTGTACCTAGGCTAATGAAACCTCGAGATACTTTTGATATGGGAGAAGTA CACAAGATGCAATTTTCGGCATCATTGCAAAATGATACTATGATGGTAGAAAATATTTGTCAATCAGAAGATGACCACAT TGATTGGGTAAGAAATGATGTGGATGGTGTAGAAATTGAAAACTCTTCTTCTAGTGGAGATGAAGCTGACAATGATGAAG GAAATGAAAATGAATATGGTAGTGATTCCGAATAACAGGTAATACTTAAAAAAAAGTGTACCTTTTCATTGCTTTATTCA TTTTAACTAGTATGCTAGTACTATAAGCATTTTCTGAAGGTGTTCATAGTCGCTGGTGATTTGTGGCCTCATGATAAGTG TGACTACTGACTACATTTATTTCCTCTGGAATTGTTTTTCAGGACTTGTCTAATCCTTTCCTTGCCAAGGCAATCCAAGG TCTGTAATTAGACTTTGCATGTTCATATGATTTTAAATTAGTCAAGCTGATAGTACTCAACTGTTCTGTAAGCAGCAATT CATTTTTATTAGCAATATCACTTGTAGCAAGCCTGATGTTATTTTTCTGTTACAAATTATACTGTTTCAAAGGGATATAA AATTGATTCATGGGGTTTTGGTAAGACAGAAGACATAGCTATTTGCCAGGTTTATTTTTTATTCAGTGGAACTTATTCAT GCATTGGTAATGAGTCGAGGTAACTCATGGCTATAATGCAATCTCTGAGCTGATCCATGTCCAAGTATTGAGGGGCATGT TGGTCTGGCAAGTTGACAAGTTCTATTTGCTGCCATATGCACAGAGGCCTCATGAACACACTGTTTAGTTACTGATGTGA AGGTAGCGAGTTTCGTTTTTCTATTAAGTAGAGATTTGACATTAGTGGGGTGGGGATAGTGGCCTTCCCCGTTTGATATT TTAGGAAATTTCTGAAACAAATTTGTTGTGTTGGGTCTGATGTATAAAAATGACTGCTGCAATTTACTGGTATGATCCAC CAGAACCTTTTCTAAAAAAACAAGGTTATTTATTTGATATGGGGAAGACTCTAATTCTCTTTAAATAAGAGTTGTCCGTA CATAAACCCCCGCTGCTATTCCTGATATTTAAGGGTGTTTTGATTGAGTGTTAAATTTCTGATTTGGTTGTGTCGTTACG CTGACTGATAACTCATTATTTCTGGTTCTTGGCTTGTGCAGGTGCTGATTTTTGTGATGTGTGTTGATTTGCTTTTAGGC TTGTTTGATGTTGCTGGAGTGGAATCTCACAAGATGAGGACGGGTCATGATCCTGATTTCTATGATGTGTGCTGCTTTGT TTTGCTTAGTTTTTGCCTCTGAACTTATTGTTTCCCTTTGTATCCTCCTTGTTTTTCTTGTATGTTTCCTTTTTTTACCT ATCTCTGAGTAGGTTGTTCTCAGACTAGTCTTTTTAAATACATTCTTCTCTTTTCGGGGAAAAAAAACTCATGAGCTGTA TCACTTAGATGTACTTGATATTTTAGTAGGGATTTAAGACCTACAATGGTTTATTTGTAAAAAAATTCAATTAAAATTTT ATTTCCATAATAATAGAAAATGCCAATGAAATGAGATCTTGATATATTGTATGTTGTCTATCTATAAGAAATCAAGCTTG TGATAACTATAAGAACCATAGAAAACTGTGTGAAATTTGTCAAATGGGACAAATATCCAACATACCTTTAGCGGCAATAA CTACAGCCAGTGAAGTGGGTTGAATGAGACAATAAAATTATGTCGTAGTGGCAATAACTAAAGCCGGCAATTATTGCTGC TAAAAACTGATAATATTTCCCGGCAATTCTTATGGTCTTTACCGGCGCCCGTAACAAAGGCTGGTAAAGCTTTTACCGAC CCCCGATATAGCAGCTCAAGTGTGACAGCCGGTAATACCTTTAGCGGCCATTTTTATTGCCGCTAAAGACAATATTTATT GCCGGTAAAAACGCTTTTTCCTGTA
CDS sequence (LotjaGi1g1v0432700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTCCTTCTGGCAGGAGCCTCCGCTCTAACGCTTCTTCTTCCTCGTCCTTGTCCGCCACGTCAGATTTCCGACCGGC ATTTGACGTCCTGGACGCAGACTGCGACGGCAAAATAAGCCGCGACGACCTCCGCGCCTTCTACGCTGGCATTTACGGCG GCGTCGCCAGCGGAGACGATGTGATCGGAGCGATGATGACGGTTGCGGACACCGACAAGGACGGGTTCGTGGAGTACGAG GAGTTCGAGCGCGTTGTCACAGAAAACAATAAACCTTTGGGGTGTGGGGCCATGGAGGAGGTGTTCAAGGTGATGGACAA GGACGGTGACGGCAAGCTCAGCCACCATGATTTGAAGAGTTACATGGCTTCGGCTGGGTTCTCCGCCACCGATGAGGATA TCAACGCCATGATCAAGTTCGGCGGCGGCGATTTATACGGCGGAGTGAGTTTCGAGGGTTTGATTCGCATATTAGCTCTT GATTATTCCGTCGCTAATTAA
Protein sequence (LotjaGi1g1v0432700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCPSGRSLRSNASSSSSLSATSDFRPAFDVLDADCDGKISRDDLRAFYAGIYGGVASGDDVIGAMMTVADTDKDGFVEYE EFERVVTENNKPLGCGAMEEVFKVMDKDGDGKLSHHDLKSYMASAGFSATDEDINAMIKFGGGDLYGGVSFEGLIRILAL DYSVAN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| Gene3D | 5 | 163 | 159 | 2.0E-29 | – | |
| PANTHER | 15 | 163 | 149 | 9.9E-68 | – | |
| PANTHER | 15 | 163 | 149 | 9.9E-68 | – | |
| ProSiteProfiles | 19 | 54 | 36 | 10.999 | ||
| SUPERFAMILY | 22 | 158 | 137 | 1.36E-28 | ||
| CDD | 23 | 87 | 65 | 3.19903E-10 | ||
| SMART | 23 | 51 | 29 | 0.014 | ||
| Pfam | 23 | 85 | 63 | 5.6E-10 | ||
| ProSitePatterns | 32 | 44 | 13 | - | ||
| ProSiteProfiles | 57 | 92 | 36 | 11.417 | ||
| SMART | 61 | 89 | 29 | 0.01 | ||
| ProSitePatterns | 70 | 82 | 13 | - | ||
| SMART | 97 | 125 | 29 | 0.0015 | ||
| ProSiteProfiles | 98 | 128 | 31 | 11.919 | ||
| Pfam | 98 | 124 | 27 | 1.1E-6 | ||
| CDD | 99 | 159 | 61 | 1.89969E-9 | ||
| ProSitePatterns | 106 | 118 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi1g1v0432700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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