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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0438600 |
| Transcript ID | LotjaGi1g1v0438600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Response regulator; TAIR: AT3G57040.1 response regulator 9; Swiss-Prot: sp|O80366|ARR9_ARATH Two-component response regulator ARR9; TrEMBL-Plants: tr|A0A1J7GFA1|A0A1J7GFA1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93355075..93357657) extracted from Lotus japonicus Gifu genome v1.2.
ATTGTAATGGCTGCACAGACCCCGTTCCATGTTTTGGCTGTTGATGACAGTCTTATTGATAGAATGTTGATTGAGAGACT CCTAAAAAGATCTTCCTTTCATGGTACTTTTCTTCTCTAGTTTTTTCTTTTCTTTTAATTTGATTTTTATTATATGTGAT GACGAGAACATGAGTATATTGCTTGTGTAGTCATTATGTTATTTCAGTAATCGTATTAGATACTCAAACAGTGCATACAC AACGTTTTTCTTGTGATATCTACTAATGAATTTCTATCATTTTTCTGAAGTTGGGATTTGGATTAGTAAATTTGAAAAAT AATATCTTCTGGGGAATTTGTGTTGAAATCACAGTTACTACAGTGGACTCTGCCAGTAAGGCTTTAAAATTTCTTGGTTT GGTTGAAGATGAGTTGAGGAATTTTGACACTAATGTTGCTTCAGAAATTCATCAGGTCCAACTCTCTTGCTACACTTAGG GGTTAAAACTTGTTACTGGATACTCACTCGTGTGCTAAACTTTGATTCAATTACAGATGCAGGATGTAGATGTAAACCTG ATCATAACAGATTACTGTATGCCAGGAATGACTGGCTATGATCTGCTGAGAAAAATCAAGGTGAGCTTTCAGAATATTTT TCAATGCCGTTAGAAGAGGCTTATTTCAAAATTATTTGAACAGTACTCTAGCTTCAATTTCATTAAATTCTGCAATAATT ATCAAATTATGCACTATGGATTTGATTTTGGTTTTCTATTTAGGAAACAATTTGAAAAAGAGAGGATCTATGTGGTGCCC ACTAGGGTGGACAACTTATTTTTTGGTCAATCGGTGGACCATCATTAATCACCGTTGGATCTTGGAATATAAGAATATTC TTTAATCGGACGGATTGGTTGGATGATTAAAGGGTAAAAATATAATTTGATATCCCTTACAAAGAAAATCAATTGGGTGA GTTCATTGTTGTTGGCACTTATCCTGGTGGGAAGAGCTGCATAACCTGCGTTCATATTCCCTCTGCCCTCCTCTTACAAG CTCTTCTTCTCCCAGCTCCGGCGTCTTGCTCCATCGCTGGCCACATCATTACCATCAACCTCGCCAACGCCGACGTTTCC CTCTCCAGCATCCTTTTCCTTCCTCACCCCCATCCCCTCTTTGCAACACTTCCTATTACAAAACCCAGAATCATAAACCA AAGAAGAAAAATTGAATCTTTTTTAGTTGAAAAACAAAGACAAGACATTAGCAAGAAAAATGAAACCCAAAAACCCAGAA ACAACAAGAGAGAAGAAATATTGATTTTTTTTAGTTGAAACCCACAAAAAATAAAGACAATGCATCACCAAGAAAGCTGA AACTCAAAAACTCAGAAACATGAATAAGAGAAAAGACGGTGGTAGATCTGTGTTGTGTTAGCTTTTGATCTGTGCTAGCA AAGAGAAGAAGATGAAAGAAGAAAAATAATCAGAAGAGAAGATGGAAGATAGATCTGTGTGAGCTTTTGATTTTTGTCGA TATGTGTGCACTTTTGATTTTGGTTTTTTAAGAGAAGAAGTTGATAGATCTGTGTTATGCTAGCTTTTGATTTTTTGGGT CTCATTTTCTGAGTTTTCTATGTTTGGGCGAGAGAAGAAGCGTTCATGGATTGAATTTCCAAGAGACCAACATCACAATT CAAAGAACGATAAATATTTAATTAGTAGTGTGTGTTGTGTCCAATTGAATCCAAAAAATCAAAGCTCCTCCACGTTTCAA TTGAATCAATACAGTTTTAACGCACAAATCCATCTTCCATACACCCTTCTGATTTTGTTTGTTGTGTTCATGTTAGACAA TTGAAATTGAAAACAATAAAGGTAATGAGGAAGGACTGTGAAAGTAGGGTGAGGGAAGTGGGAGGAAGAGGGAGAAAAGG GATAAAGTCTGAAGTTCCCTTGGTGTAAAGTCTAATATATCCCTGGTGCACCGGTGGACCAAAAATAAAATGGTCCACCC TAGTGGGCACCGATCTATGTCAATGTTCAAACAAAACAAAAACTCATTTCTGAACTCTGAATTGGGATTATTCCCAAAAT TCTAATTCCCAATATAACAAATCACAAACCAAAATGTTCATTGCCATCATAATATCCTATTGCTTGTTTAATCTCCTCCA GTTTGTTGTTAAAAAAATAATATAAGTTTATTGATTTGCAGGAAACTAAATCTCTTAAAGACATACCAGTTGTAATTATG TCCTCAGAGAATGTTCCATCAAGGATCAACAGGTAAGGAAATTTCATCCTATAACCCAATCCAAAATCAAAGTCATTATT TTGAAAATGACAGATACATATTAAAGCGGCATCACATGATTAAATTGAAATTTGACTTTACTATTGTTTGTATCAGATGC CTAGAGGAGGGAGCTGAAGAATTCTTCCTGAAACCAGTTAGGCTATCAGATTTAAACAAGCTCAAGCCCCATTTGTTGAA GTCAAGAGTGAAGGAAGAGCAAGACCAACCCATCAAATGACAAAAGGAAGAGCATAAAAGAATCCACTCCCCATATAAAA GTAGACTAAAATGTACTAGTTAA
CDS sequence (LotjaGi1g1v0438600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCACAGACCCCGTTCCATGTTTTGGCTGTTGATGACAGTCTTATTGATAGAATGTTGATTGAGAGACTCCTAAA AAGATCTTCCTTTCATGTTACTACAGTGGACTCTGCCAGTAAGGCTTTAAAATTTCTTGGTTTGGTTGAAGATGAGTTGA GGAATTTTGACACTAATGTTGCTTCAGAAATTCATCAGGATGTAGATGTAAACCTGATCATAACAGATTACTGTATGCCA GGAATGACTGGCTATGATCTGCTGAGAAAAATCAAGGAAACTAAATCTCTTAAAGACATACCAGTTGTAATTATGTCCTC AGAGAATGTTCCATCAAGGATCAACAGATGCCTAGAGGAGGGAGCTGAAGAATTCTTCCTGAAACCAGTTAGGCTATCAG ATTTAAACAAGCTCAAGCCCCATTTGTTGAAGTCAAGAGTGAAGGAAGAGCAAGACCAACCCATCAAATGA
Protein sequence (LotjaGi1g1v0438600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAQTPFHVLAVDDSLIDRMLIERLLKRSSFHVTTVDSASKALKFLGLVEDELRNFDTNVASEIHQDVDVNLIITDYCMP GMTGYDLLRKIKETKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNKLKPHLLKSRVKEEQDQPIK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 152 | 150 | 1.1E-78 | – | |
| PANTHER | 3 | 152 | 150 | 1.1E-78 | – | |
| SUPERFAMILY | 6 | 145 | 140 | 4.13E-28 | ||
| SMART | 7 | 139 | 133 | 3.1E-17 | ||
| Gene3D | 8 | 156 | 149 | 1.5E-31 | – | |
| ProSiteProfiles | 8 | 143 | 136 | 33.996 | ||
| Pfam | 9 | 137 | 129 | 1.2E-19 | ||
| CDD | 10 | 135 | 126 | 4.10424E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
Expression pattern of LotjaGi1g1v0438600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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