Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0438700 |
| Transcript ID | LotjaGi1g1v0438700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycerol-3-phosphate acyltransferase; TAIR: AT2G38110.1 glycerol-3-phosphate acyltransferase 6; Swiss-Prot: sp|O80437|GPAT6_ARATH Glycerol-3-phosphate 2-O-acyltransferase 6; TrEMBL-Plants: tr|A0A1J7HFQ9|A0A1J7HFQ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93369062..93369968) extracted from Lotus japonicus Gifu genome v1.2.
ATGCAGGAAGCATATATTGTACCAAGGATTAAATGTGAGGCACTACCAAGAAACAAGCTTCTAAGCCAAGTTATTTTTCA TGAGGGTAGGTTTGCTCAAAGGCCAACTCCTCTAGCTGCACTTTTGACCTTCCTATGGCTGCCAATTAGTATCATGCTCT CTATTTTAAGGGTCTACCTTAACATCCCTTTGCCAGAAAAGATTGCATGGTACAACTACAAGCTCTTGGGAATCAGAGTC ACTGTGAAGGGTACCCCTCCACCACCCCCAAAGAAAGGTCAAAAGGGGGTTCTTTTTGTTTGTAACCATAGGACAGTTTT AGACCCAGTTGTTACAGCAGTTGCACTAGGAAGAAAAATTAGCTGTGTCACATATAGTATCAGCAAATTCAGTGAAATAA TTTCACCAATCAAAGCTGTGGCATTGTCAAGGGACAGAGAGAAAGATGCAGCCAACATTAGGAGGTTGCTTGAAGAAGGG GACTTGGTGATTTGCCCTGAAGGCACAACTTGCAGAGAGCCATTCCTCTTGAGGTTCAGCGCGCTTTTCGCTGAGCTAAC CGATAGGATTGTCCCGGTCGCGATTAACACGAAACAAAGCGTGTTTTACGGAACAACGGCTCGCGGCCATAAATTGCTGG ACCCTTATTTTGTGTTTATGAATCCCATGCCAACATATGAGATCACTTTCTTGAACCAGCTTCCGAAAGAGCTCACTTGC ACTGGAGGGAAATCGGCCATTGAAGTTGCGAATTACATTCAAAAGGTTATTGCAGGAGCTCTGGGATTTGAGTGCACCAA CTTAACAAGGAAGGACAAGTATGCCATGCTTGCAGGAACTGATGGGAGTGTTCCATCTAAGAAGGAAAAAGCTTGAAGCA GAGAGGCTAAGTAGTTTCACCTTTTAA
CDS sequence (LotjaGi1g1v0438700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGAAGCATATATTGTACCAAGGATTAAATGTGAGGCACTACCAAGAAACAAGCTTCTAAGCCAAGTTATTTTTCA TGAGGGTAGGTTTGCTCAAAGGCCAACTCCTCTAGCTGCACTTTTGACCTTCCTATGGCTGCCAATTAGTATCATGCTCT CTATTTTAAGGGTCTACCTTAACATCCCTTTGCCAGAAAAGATTGCATGGTACAACTACAAGCTCTTGGGAATCAGAGTC ACTGTGAAGGGTACCCCTCCACCACCCCCAAAGAAAGGTCAAAAGGGGGTTCTTTTTGTTTGTAACCATAGGACAGTTTT AGACCCAGTTGTTACAGCAGTTGCACTAGGAAGAAAAATTAGCTGTGTCACATATAGTATCAGCAAATTCAGTGAAATAA TTTCACCAATCAAAGCTGTGGCATTGTCAAGGGACAGAGAGAAAGATGCAGCCAACATTAGGAGGTTGCTTGAAGAAGGG GACTTGGTGATTTGCCCTGAAGGCACAACTTGCAGAGAGCCATTCCTCTTGAGGTTCAGCGCGCTTTTCGCTGAGCTAAC CGATAGGATTGTCCCGGTCGCGATTAACACGAAACAAAGCGTGTTTTACGGAACAACGGCTCGCGGCCATAAATTGCTGG ACCCTTATTTTGTGTTTATGAATCCCATGCCAACATATGAGATCACTTTCTTGAACCAGCTTCCGAAAGAGCTCACTTGC ACTGGAGGGAAATCGGCCATTGAAGTTGCGAATTACATTCAAAAGGTTATTGCAGGAGCTCTGGGATTTGAGTGCACCAA CTTAACAAGGAAGGACAAGTATGCCATGCTTGCAGGAACTGATGGGAGTGTTCCATCTAAGAAGGAAAAAGCTTGA
Protein sequence (LotjaGi1g1v0438700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQEAYIVPRIKCEALPRNKLLSQVIFHEGRFAQRPTPLAALLTFLWLPISIMLSILRVYLNIPLPEKIAWYNYKLLGIRV TVKGTPPPPPKKGQKGVLFVCNHRTVLDPVVTAVALGRKISCVTYSISKFSEIISPIKAVALSRDREKDAANIRRLLEEG DLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFYGTTARGHKLLDPYFVFMNPMPTYEITFLNQLPKELTC TGGKSAIEVANYIQKVIAGALGFECTNLTRKDKYAMLAGTDGSVPSKKEKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 37 | 37 | - | – | |
| PANTHER | 2 | 288 | 287 | 1.5E-173 | – | |
| PANTHER | 2 | 288 | 287 | 1.5E-173 | – | |
| SUPERFAMILY | 14 | 282 | 269 | 1.96E-31 | – | |
| TMHMM | 38 | 60 | 23 | - | – | |
| Phobius | 38 | 60 | 23 | - | – | |
| Phobius | 61 | 291 | 231 | - | – | |
| Pfam | 90 | 186 | 97 | 1.7E-8 | ||
| CDD | 97 | 258 | 162 | 3.21705E-19 | – | |
| SMART | 97 | 198 | 102 | 6.0E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring acyl groups | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0438700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…