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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0448300 |
| Transcript ID | LotjaGi1g1v0448300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2C-like protein; TAIR: AT5G01700.2 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q6NKS1|P2C65_ARATH Probable protein phosphatase 2C 65; TrEMBL-Plants: tr|I1L765|I1L765_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0448300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:94736126..94739645) extracted from Lotus japonicus Gifu genome v1.2.
ACCAAACGAAACCACCGAAGATACAGACAAATATAATATTATGCAAACTTACAACTTGTTGTCTCAACAACATGGCAACC TCTCCTCCATTTTCTTCCATCCTCCATGTTCGTTCCAATTCCTTGCATGTCTTTTTTGTCATTCCCCCTTTACTTTCTTC CTTTTCCTCTGCATCACCCTGATTTCTGAATCTCACCCTTCATTGATTCCTGTAGAAATATTCTATCATTCATCTCTTTC TCGCTTGTTTTCCCCTGAATATCTTCTGGGTATCCGTTGGAATTTTGTGGGGTGTTCTTGTTTTCTTCATTGGAAATTGT TGTTCTTGTCGGAGCATTATTATGGGTGGCTGTTGCAGTTGCAGCCACGATGTTTCAGTTCGGGGCAAGGTGGAAAGCGA GGTGGATGATGGGGAATATGAGTATGAATCTCATGAGAATGTTGATGATGTTACGTATCAACGTGATGGAGCAACGATCA GGCTTAGGGGATCCTCTAAGTTTGCATCAATGTACTGCCAACAGGGTAAGAAAGGTGTGAACCAAGATGCAATGACTGTT TGGGAGGTAAGATTCTTCACCTATTTTGATTTTGATTGATTTTTTCCAATTAATTTTGATGCTTTCTTGTTCTTTTGATA TATAAAAAAATTGTTATTTGTTTTTTTAAGTTTTCAGGCAATTCATGTGGTATGTGATAAAGCTGTTTTCTTTGGTCACG GATTTTCTTTCATTTCATTAATCCCCAACTTTTAGTGAATTTAAAGGCTAATAACATTATTAGAACTCTCTTTCTTGTGT AAATAGTTACCTGTTCATGCAATCATGAGTTGATTTGTTCCCCCATTTTGTCTTCCTGGTTGTTCTCCTCTGTTTTTCAT TTTATTTCCATGATAATCTTAGCACCTTATCAGCCATGTTTTTTCTTCTCCCTTTTTATATTGATTAAACAAAAAGAAAA AATGACACTTCCTTTAGCTAGTTATGAATTTGAAGCCTCTGTGAATTGTATCCTTGTCTGCACTTTCAATGGCAGTAAAG TGAAGAGATTCACATGATTTGGAAATAATTCAATTTCAACCATTCATAATAAAATTTTCTGTCTTTAAACCAAGTATTAA GATGATATATGAAGAAGATAAAAGATTAAACAACAACCTAATATAATGCACCTTTGAAGTTGGGTTATCCTTAAATTGGG TCTCGAGAATTGGTACCAAGATTCTTCTTTAACAGCATTTCTGGGCTTGATATAGTCTTTTTTAGCTATATGGTTGTAGT AATGATACAAATCGGGCGATGCTATCCTATGGTCTTTATTATATCATGATGATTCTTAATTGATGAAACATGTGACTTGG ATTAATGTTAGCTGTGCTATATTTTCAGGACTATACCGGAGAACAAGATATGATCTTTTGTGGCGTGTTCGACGGTCATG GTCCTCTCGGGCACAAGGTTTCGCAATTCATCCGTGACAATCTACCCTCAAAACTGTCTGAAGCAATCAAAATGTCACAA CAGAAGACCTGCAAATACTATGATGCTCATGATACAGACACTGCCAGTTTCGATGACGTCTACGACGATGATAATAACAT CAACATGTCCCTTGCTTCATGGGAGGGATGCTTTCTGAAATCCTTTGATGAGATGGATGATCACCTTGCTCAGGAAATCA ACACTGACAGCTATTGCAGTGGTTGCACAGCTGTAACTGTAATTAAACAGGTGCAACCTTATATCTAGATATTCACAATA ACGTTACCTCCTTGACAATAATTTCCCATAGAATTGGTTTTTGATCGAGCTCAGTGGGCTAGTCTGATCCATATAGCAGA ACTCACTTAGTGGTATAAAACTTTTGTTGTTGTTGAATAATTACTCACATCACTTGTATCCGTTAAATTTCAGGGTGATC AGCTGATAGTTAGCAATTTGGGTGATTCTCGCGCAGTTCTTTGCACAAGGGAAAGAGACCAACTTGTTCCTGTTCAACTT ACTGTTGACTTGAAACCAGATCTTCCAGGTTAGTCTTGGCCTCAATTCCCAAGTCTTATTACAAGCCTATCAAGTCTTAG TCTAACTTAATTTTCTTCTTCGATGTTTCTCAGGTGAAGCCTCAAGAATCATGAGCTGTGAAGGCAGAGTTTTCGCAGCA GATGAAGAACCGGATGTTTACAGAATTTGGATGCCGGATGATGACTGCCCTGGACTAGCTATGTCAAGAGCCTTTGGAGA TTTCTGCCTTAAAGATTATGGCCTCATTGCAGTTCCTGAAATATTCTATAGAAAAATCACCAAGCAAGATGAGTTTGTGG TTTTGGCAACTGATGGGGTTAGTAGTATTCAAATCTCAACTCTGTATGCTGGATCATGAATCCTAAATTAGAAAACAAAC ACGAACTTTAGCATGTTTGAATCAACTTATTTTTCCTCAGAACCAATTCTGACACCTATAAGCGACTAACACAAGCCTCT CCACTGAATTGATTTTTCTTTTAGAATCAACTGTAAAATGATTGCCAAACATGCACTTACTGGTTGTTGTACTTGTAGGA TTCCAAACATAGTTGCTTATGGGTTGTGTAACTCGATTCATATTTTCTCCTAATTGTTTAATCAAATCATTAAAGCAATT AAATAAGATTTTCATTAATTAACTTGTGCAAGCATCTATTTGAAGAACCTTACTTTTCTTTTTCACAGGTATGGGATGTG CTTACTAATAGTGAAGTAATAAACATAGTTGCTTCAGCACCAAGGAGGTCCATCGCGGCCAAATTGTTAGTAAAACGCGC TGTTAGAGCCTGGAGGTACAAGTATCCTGGCTCCAAGGTTGATGACTGTGCAGCCGTATGCTTGTTTCTTGATGATCAGC CTTTGTTATCCCATTCCCAGTCCAGTATGTGTCGAAAAAGTCGGCATCGTAGCAAGCACCTGCATAGAAATGAAGATACT GAAACTGTGGATGGCAAGGTTGGAGTGGAACTGGATGAAGAATGGAAAGCTCTTGGAGGGCTAGTCAGAGCCAACTCCAT GTCGAAACTTCCGCGCCTCGCTAGGGATGTGAGTAGAAGGCAATCATCTAAGCACCTAAAGGGAAGTTGAAGTTCAGAAA CTCAAGGAACTGAGAAGTTAATAAAGTGGTCAAGATTGGACCTCAACTTGTATATTTAGGTGGAAAAAGAAGGGTGGAAG ATTTTAGTTTCATATTGGTGTTCCCTTACAAATGAGACTGAAAAATTTAATGATGAGCTTTATAGTATAAAAACACTCAT CTAATTTTTTCACTCAAATTTTAAGGAGATTCCAAACTGCATGTACTTAAAAAATTGTGATGGTTGTGCCTTCTCTAAAG ACTCCCATGGGAGGATTTGGATATGGTGCAGTCACCATTAACTAATTATGATTATGACTGTAATCAATAGCAACGTTTAT GTCTTATCCGTTTTATAGATTGATGATTTACTCAGAAGGATTACTTCTAACATAATTTCAATTGACAGTTTTTCTTTTTG
CDS sequence (LotjaGi1g1v0448300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGCTGTTGCAGTTGCAGCCACGATGTTTCAGTTCGGGGCAAGGTGGAAAGCGAGGTGGATGATGGGGAATATGA GTATGAATCTCATGAGAATGTTGATGATGTTACGTATCAACGTGATGGAGCAACGATCAGGCTTAGGGGATCCTCTAAGT TTGCATCAATGTACTGCCAACAGGGTAAGAAAGGTGTGAACCAAGATGCAATGACTGTTTGGGAGGACTATACCGGAGAA CAAGATATGATCTTTTGTGGCGTGTTCGACGGTCATGGTCCTCTCGGGCACAAGGTTTCGCAATTCATCCGTGACAATCT ACCCTCAAAACTGTCTGAAGCAATCAAAATGTCACAACAGAAGACCTGCAAATACTATGATGCTCATGATACAGACACTG CCAGTTTCGATGACGTCTACGACGATGATAATAACATCAACATGTCCCTTGCTTCATGGGAGGGATGCTTTCTGAAATCC TTTGATGAGATGGATGATCACCTTGCTCAGGAAATCAACACTGACAGCTATTGCAGTGGTTGCACAGCTGTAACTGTAAT TAAACAGGGTGATCAGCTGATAGTTAGCAATTTGGGTGATTCTCGCGCAGTTCTTTGCACAAGGGAAAGAGACCAACTTG TTCCTGTTCAACTTACTGTTGACTTGAAACCAGATCTTCCAGGTGAAGCCTCAAGAATCATGAGCTGTGAAGGCAGAGTT TTCGCAGCAGATGAAGAACCGGATGTTTACAGAATTTGGATGCCGGATGATGACTGCCCTGGACTAGCTATGTCAAGAGC CTTTGGAGATTTCTGCCTTAAAGATTATGGCCTCATTGCAGTTCCTGAAATATTCTATAGAAAAATCACCAAGCAAGATG AGTTTGTGGTTTTGGCAACTGATGGGGTATGGGATGTGCTTACTAATAGTGAAGTAATAAACATAGTTGCTTCAGCACCA AGGAGGTCCATCGCGGCCAAATTGTTAGTAAAACGCGCTGTTAGAGCCTGGAGGTACAAGTATCCTGGCTCCAAGGTTGA TGACTGTGCAGCCGTATGCTTGTTTCTTGATGATCAGCCTTTGTTATCCCATTCCCAGTCCAGTATGTGTCGAAAAAGTC GGCATCGTAGCAAGCACCTGCATAGAAATGAAGATACTGAAACTGTGGATGGCAAGGTTGGAGTGGAACTGGATGAAGAA TGGAAAGCTCTTGGAGGGCTAGTCAGAGCCAACTCCATGTCGAAACTTCCGCGCCTCGCTAGGGATGTGAGTAGAAGGCA ATCATCTAAGCACCTAAAGGGAAGTTGA
Protein sequence (LotjaGi1g1v0448300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGCCSCSHDVSVRGKVESEVDDGEYEYESHENVDDVTYQRDGATIRLRGSSKFASMYCQQGKKGVNQDAMTVWEDYTGE QDMIFCGVFDGHGPLGHKVSQFIRDNLPSKLSEAIKMSQQKTCKYYDAHDTDTASFDDVYDDDNNINMSLASWEGCFLKS FDEMDDHLAQEINTDSYCSGCTAVTVIKQGDQLIVSNLGDSRAVLCTRERDQLVPVQLTVDLKPDLPGEASRIMSCEGRV FAADEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLIAVPEIFYRKITKQDEFVVLATDGVWDVLTNSEVINIVASAP RRSIAAKLLVKRAVRAWRYKYPGSKVDDCAAVCLFLDDQPLLSHSQSSMCRKSRHRSKHLHRNEDTETVDGKVGVELDEE WKALGGLVRANSMSKLPRLARDVSRRQSSKHLKGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 382 | 373 | 2.1E-185 | – | |
| PANTHER | 10 | 382 | 373 | 2.1E-185 | ||
| Gene3D | 44 | 358 | 315 | 2.4E-79 | ||
| SMART | 45 | 354 | 310 | 8.4E-68 | ||
| SUPERFAMILY | 50 | 358 | 309 | 7.98E-62 | ||
| ProSiteProfiles | 54 | 356 | 303 | 46.082 | ||
| CDD | 54 | 356 | 303 | 6.70838E-71 | ||
| Pfam | 79 | 333 | 255 | 9.3E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi1g1v0448300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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