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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0451200 |
| Transcript ID | LotjaGi1g1v0451200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | FBD-associated F-box protein; TAIR: AT1G69630.1 F-box/RNI-like superfamily protein; Swiss-Prot: sp|Q9FJC1|FBD31_ARATH Putative FBD-associated F-box protein At5g53635; TrEMBL-Plants: tr|I3SKC9|I3SKC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0451200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:95036234..95042855) extracted from Lotus japonicus Gifu genome v1.2.
CCCATCTACTATTGTGAACAAATTGTTTTCCTTATTTTCTCCAATCCCTCCCTTGCGAAAGCATCTCACTTCGTATTCTC TCTCGCCGGTAAGAAACCCTTTTTTCTTTTTCAGGTGCTTTCCCTCCAATGGTCGATAGGATCAGCGCTTTACCGGACGA AATCATCTGCCACATTCTATCGTTTCTCCCGACGGAAAACGCCGTCGCCACCGCCGTCCTCTCAAAGAGATGGACCCATC TCTGGCGCTCAGTTTCCGCTCTCGACTTCTCCTCCGTCAGAATGTACGAACCCGATGACCACCGTTTCTTCTTCAGCGAC ATCGTCTACTCGGTTCTTCTCTTTCGCAACGCCGCTACCCCCATCAAAAAATTCAGCCTCGAACTTGATGATGATGTTGC TGTCGCTAATCTTGACATAGCCAATATTCACAAATGGGTCAATTTTGTCACGCAATGCAGAGTTGGAGGAATCGAGCATC TTCGTCTGCATTTCATGGATTTCATTCAGTTGCCCCAGTTGCCTATTAGCATTCTCAGTTGCAAAACTCTGGTTGTTCTC AAATTGTGTGGGTTGCATTTGATCAATGGTGTGTTTTCAACTGGACTTCCCTCACTCAAAATTCTTCATGTTAAAAAAGT TGAATTCACAAGTGATGGACTACTTAAGGAGTTTCTAGCTGGATGCCCAATTCTTGAGAATTTGAAAGCGCGTCGCATTT GGATCACCGGTGAGTCCTCCTTTTACCGCGGCGGAGAGCTTGCAGACTTAGGCTTACCCAAATTGATTAGAGCAGATATC GTTCGCAGTAGGCTTCCGATGCTGCAACCATTTTATAATGTGGCCTTCCTGCGCGTAGACATAGAAGAGGTTTGATTATG ATGAATTGATGATGATTATTATGATTTATTGAATGAGAAAATGTGAATTTGGTTCCTTTATGTATTGTTTTCACACTTTT GAATTTCGCCTTGATTTCTCACAGACTGTCATTCTGAATTGTTTAGGTGCATTATGCTTTTCCTTACTTTCATAATTTGA CCCACTTGGAGCTTGTCATTGAATTGTATAATTCGCTTGTGCTAGTAGAAATGCTCAAGCACTGCCCTAACCTTCAAAGT CTTGTTTTTGAGGTTTGCAAAGTTTGGTTTTGATGATTTCTGTTTTCTTTTCTTGATAAATCTCTAATGTTTTTTTTAAT GTGTATTGTTAATCTACTTACGTGGACGGTAGAGATTGGACGAGGCCCAGAGATGTGACCCAGAAAATTGGATAGACCCA GAATTTGTTCCTGAATGTCTTTCATTTAACCTTAAAACTTGCACTCTTCGATTTTTTGAAGGCTTAAAAGCCGAGTTTCA GTTAGCAAGATATGTTTTGAAGAATGCAAGAGTTTTACAAAGCTTGACAATCTTTAACGAACGGACAATCAGCCGAAGAC AGATTAGGAAAAAGTTATCCTCAGGCTTGAGGAGCCCTTCAACTTCAAGATGTCAACTTATAATTCACCCCATTTAGGCC ATGTAAGTAGTAGTTCCTCTATATCCTGACAGTCTTTTGATCAATTTCTACATGAAACTGTGGTATTTGGTTGTTTGAAG TATGAACCTTGAAGGGCAAGAACATTGTCTTGGTGGACAAGTTAAGGAGAAATGATTCACATGATTGAGCACGCCAGCCA GTTTTATTTCCCCCTTGCTTTTGGCTTTAATTAGATTAATGTTTATCCATTTTCTAGCAGTTGTACGTAAAATTCTGATT TTATGCTTATCCACTGGGGTAGAAGGGTAAAAATTGTAAATTATTGTTTTTCAGATGCTGTCTTTGATCAATGACACAGA AACTTGGATTAAAGATTAAGCAAGTAGCTGTTACTCAAAAGGTTTTTTTTGTTGTTTGCTTTTTTATGATATTAGTGTTT TGATTTTTTAATTAAAGAGGACTTGGATTTAAATGGCCTTTGCAAAGATTTGGTTGGTTTCGATACTGTGAACTGGGTTC AAACCTGTTTTAATTTCATTTTTTAGAACTTGTTCAGCCTCAAAACGGGTTTGTAAAACCAGTATCAGAACTGGTTCTTT GAGTTCAAAAACATGTTTACCTGATATTAAGTTGAAGAACTGGTATTATGAATGTCCTACAACCTTTAGAACTAGTTAAG CTACCCGTTTATAATCACCACCAGTTTGCTTGCATATTAAATAATAAGAATTTGAATCCATGTCTTAATTAATCAACTTA AATGACATCAGTAAAAATGGTTTGTTTTCATTAGCTTGTAGGAAGAGAGTGTCTAAAATGGTTCCCCTGATCTTTGTGAA AGAGTCAGCATATGAAAATTCGCACTAAGGTATTGGAATTTTAATTTTTGGTCACGGACTTGTGTAGAAATAAGGTTGTG GTCTTGTGGATGATGCCATAAAGACACTCACTTGTATGATAAAAGATAGTCATAGTTTGAATGGGAAGCTATGGTTTTTC GGGGAGATATGAGGAAACTAGGATTTTTCCAGTCATCATGGATTCTACGGATATGATTAGGTTCTTGGTGAAGGAAGGGA GGGGTATGGATGCTTTGTATGTTCTGAACCGGATGAAAGAAGATGGAATAAAGCCTAGCATTGTTTGTTATATTATTGTT TTGAGTGTGATTGTTGCATAAGGGGGTTATGTGAAGTTAGATGAATTATTTTATGAAATTCTTGAATTGGAACATCTTCA TGATGTTTACACATAAAATGTGCATTTAAATGGTTTTTGCAAGAAGAACAAAGTAGATGAAGTTAGGATGCAATCTGATT GTGGTTACTTAGAATACTTTATTTGGCAATTGTGCTCTACCATACTTCTTGCATAATCTATAATCTATTGCAATAATGAG CCATCTCCTTTTTCAACCAAGTCTTGTTCGACATAATAAATGCAATCCTGCTCTCTGTTGTTTGATGCGTCAGCAGGATA GGATAAAACAATTCTGACCCTTATTCTATTCATCATGTGTAAAAGACTAAGGGCCCGTTTGGTGGTCAGGATATGATAGG ACATGATAGGATAATAATCATATCATGTTGTTATCCGTTGTTTGGTGTGTCAGCAGGATATGATAACACTATCCTGTCCT CTATCCTATCATGCTCATCATGTGTAATTTATAATTACAGGATAAGATACAAGTTATATATTTTCTTTCAGTATCCAAAC TCCAAATTAATTTATTTTAATATTATATAATTTATAATTTATAATCATTTAATTAATAAATATAAAAATATTAATTTAAC TAAAATAAAAAATTGTTATTCATAAATAGTAAAATAGACTACTCACTTACAAATATTGATTTATTAATAGTAATAGACTA TTTTAATATTTTCATCTTCTATTATTAAAAATTATTTATCTGCTTATATAATAATTTAAATATAAATTACTTTTGAAATA ATAATATTTTTAATTTAGTTAATTTTTATTGTTTATCATGTGTCACAATTAAGTGAAAACCAATTGGTTACAAATATTAC CTTTTTAATAATAATAGAATAATTTTCTATTTTTATCTCCTATTATTTAACATTATTTATCCACTTATATAATAATTTAT AATTTAAATATAAAGTACTTTTGAAATAATTATATTCTTAATTTAGTTAACTTTTATTGTTAATTATCACGTGTCACAAC TAAGTGAAAGTAATTGATTAATTGCATAATTTTATTTAAAATATAGATTATCTTCAAAACAATAAAATAGGCTAATTAAT AAAATTTAAATTTATTTTAGTTATTTTAAAATATAAACTCATTCATGAAAATGTATAAAAAATTAAATTTAATAGAATGA TTAATTTTTAAATGTATTTTTTATTCAAATATAAATCTGATACATTTTTCCTTATCATATCCTGTCTTTATCATGTGCAC CTCAAACACATGATATGATAAGTGTCTATCCTGGTCTTATCTTATCCTGTTGCTATCATGTTCACATATCATATCCTATC ATATCCTATCCTGACCACCAAACGGGCCCTAAAAGTTATCATGAGGGGGAGCTAAGCTAGAATTATCCTGACAGGACAGG ATAACAGTTTTCGATTCCTTTTTTGGACCCTAACTCTAAATTCAATATTTATATTTTATATAATTTAAAATAATAATAAT TAAATAATATAAAAATATTATTAATCTTAGTAATATACTAATTTTATTATTTATTAATTACTAGTTGTTATTGTTAAGTT AAAATTATTTAGTTATTAAATGAACTAATTTATTAATGGGAAAATGTTGAATTTACTCATATAAAACAATTAAATTATCA TTATCATTTAATGCTACTTAGTTAACATTATTTTTTATTAATATTATAATAAAAATAAATAAAACTATTATTCACTTGCA ATGAAATAAATTACTCACTTGTAAATATTGATTTATTAGTAGTCAATATAGACTTATTTAATATTATTAATTTCTCTTAT TTAAAATTATTTCTCTACTTATATAATAATTAATAGTTATTTTTGTTACAAGATGAAGAGTATAATAATTTATAGTTTAA GTATAAAGTAATTTTGAAAAAATAACAATTTTAATAATATATTTTAAATTTATCATTTGCCACTACTAGGTTAAAACCAA TTTGTTAAATGTATAGTTTTTACATTTAATTAAAATAGGCTCCCTTCGGAAAAAATTAAAATGGACTAGTTAATAAAATT TTAGTTGATTTTAAAACATAATCATTTATAAAAATATGAAGAAAAAAAAAAACAGATTTTGATAGATTAGTCATTTCCCA ACGTCGTTGTCGTCATCGCTATCGCCACTACCATCACTGCCACCACCACTCACCACTGCTACCACCACAAATCGCATCCA CCACCTCAATCGCCATTGGCATGGCTGCTACCACTACATACCGCCATGACCTAGCACCACAACCACCTCCCCCCGCCTCC GTCATCACGGCCACTACTGCCATCACTGCCACCACCATCACTTCCAACATCGCTACCACCTCTACGGCCACTACCACCAC CCTCCATCATCGTCGCCGCCATTATCGCAGCCACCTTGGCTACCACCGCCATCTTTACCACCCACTAACATTATCTTCAT TTTATAATATAACCATTATTTAATATTTCACAAAAAATAAGTTTATATTAATTTAAACGAAATGATAAATTATGTATTAA AATTTTATCAGACCTAATACTATACATGATTACAAACGGGACTTTTTATGTTAAACTAGTTTCAACATAAAAAGAGTTAG ATTGCCCTAATATCGTTACCGCTCTCAAATGCAGAAAATTTCGGGAATTAGATTTCCCACCCCCGGTTTTAGAATTCCCA CCCCATTTAAAAGTGGGGAAAAACCAATATTGCCCCTCCGTGTTTTAGTCCGAATGTTATACATTCGGACTCCTCCGAAT GTTCAAATGTCGGACTCAGTTAATAATAGAACAAAACTATCAATTCAGATTCACATTTGTAACGGGACAGAACATCAACT CTCGGAGGTCTCAAGAGAAGCGACCCAGAGGCACCCAAATCGACCCACACATCACGACCAAAAGCGACCAAGAATCATCT GTGTTTCAAAACCGACCACACTGAGGTAATTTGTTGGAATCCACGACCAAGAATCATTTGTATTTTGAATCATGTGTATT TTGATGAGTTGGTGTTGTGATTTCAAATTTAGGGTTTCAAATTTAGGTATTTCAGATTAGGTTAGGTTTCGAATCCCTTT TTATGAGTTGATTTGGTGAAATTTCATTCCTATTGTGATTTCTGGGGTATTTGGGGTTCTGAGGTGCGAATTTGGGGATA TTCGTACTCCGAATCTTGAAGATTCGGAATGGTTCAGGACTTCAAGATTCGGACTGGTTCAGGACTTCAAGATTCGGACT TGAGAGATTCAGTACTGTCTCTTCTATTGCTTCTGTTATTGTTTTTCATGATAAGATGAATGGGGTGAAGATAATTTCCA TGCTTTTGGCTATCTTAGGGTAGTGGTTAAGGACATAACCAACTTGAGATTTCACATTTGAATTTCATAACATTATTTGA ATTGTATTGAAATTTCATAACATTAGTTTACTGTGTATACTTGTGGATTGCTTCAACTAGTTAGTTACTCATTACATAGC TATTAATCTGTTTTCCTTATTTTTTATGATAGATTATGGCGAGGACAAAGTAAACTAAGAGGGTATCGTCTGAAGAGTTG GCCGATCGTCGTGCCTATCTCCACGCTTCTCATAGGCGAGGTGATCATGATACAGATGTGTCGACTTCTCGGAAGGGGGC TAGGAAGGGGCTAGGAAGGGGGCTCCGAAGGCGACCACTGAGGTTCCTGCCCCTGCTACTGAGGTTCCTGCTACTCAAGT TCCTGCTACTGAGGTTCCTGCTACTCAGGTTCCTGCTACTGAGGTTCCTGCTCTCTCGACGCCTGAGGTTACTGCTACTG AGGTTTCTCCTCAGTCGACGCCTGAGGTTACTGCCCACGATACTGTTGAGCCTTCCACCTCTTCACTTGATATTGATGCA GTTGAGGAGCCGGAGTCGGAGTCGGGGTCTGAGTCTGAGATTGAGGGTGAGGATGTAGAGGT
CDS sequence (LotjaGi1g1v0451200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCGATAGGATCAGCGCTTTACCGGACGAAATCATCTGCCACATTCTATCGTTTCTCCCGACGGAAAACGCCGTCGC CACCGCCGTCCTCTCAAAGAGATGGACCCATCTCTGGCGCTCAGTTTCCGCTCTCGACTTCTCCTCCGTCAGAATGTACG AACCCGATGACCACCGTTTCTTCTTCAGCGACATCGTCTACTCGGTTCTTCTCTTTCGCAACGCCGCTACCCCCATCAAA AAATTCAGCCTCGAACTTGATGATGATGTTGCTGTCGCTAATCTTGACATAGCCAATATTCACAAATGGGTCAATTTTGT CACGCAATGCAGAGTTGGAGGAATCGAGCATCTTCGTCTGCATTTCATGGATTTCATTCAGTTGCCCCAGTTGCCTATTA GCATTCTCAGTTGCAAAACTCTGGTTGTTCTCAAATTGTGTGGGTTGCATTTGATCAATGGTGTGTTTTCAACTGGACTT CCCTCACTCAAAATTCTTCATGTTAAAAAAGTTGAATTCACAAGTGATGGACTACTTAAGGAGTTTCTAGCTGGATGCCC AATTCTTGAGAATTTGAAAGCGCGTCGCATTTGGATCACCGGTGAGTCCTCCTTTTACCGCGGCGGAGAGCTTGCAGACT TAGGCTTACCCAAATTGATTAGAGCAGATATCGTTCGCAGTAGGCTTCCGATGCTGCAACCATTTTATAATGTGGCCTTC CTGCGCGTAGACATAGAAGAGGTTTGA
Protein sequence (LotjaGi1g1v0451200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVDRISALPDEIICHILSFLPTENAVATAVLSKRWTHLWRSVSALDFSSVRMYEPDDHRFFFSDIVYSVLLFRNAATPIK KFSLELDDDVAVANLDIANIHKWVNFVTQCRVGGIEHLRLHFMDFIQLPQLPISILSCKTLVVLKLCGLHLINGVFSTGL PSLKILHVKKVEFTSDGLLKEFLAGCPILENLKARRIWITGESSFYRGGELADLGLPKLIRADIVRSRLPMLQPFYNVAF LRVDIEEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 245 | 244 | 6.3E-44 | – | |
| PANTHER | 2 | 245 | 244 | 6.3E-44 | – | |
| ProSiteProfiles | 2 | 50 | 49 | 9.815 | ||
| Gene3D | 3 | 233 | 231 | 6.2E-25 | ||
| SUPERFAMILY | 3 | 55 | 53 | 1.11E-13 | ||
| Pfam | 4 | 43 | 40 | 1.2E-7 | ||
| SMART | 8 | 48 | 41 | 7.8E-4 | ||
| SUPERFAMILY | 110 | 206 | 97 | 5.41E-8 | – | |
| Pfam | 162 | 187 | 26 | 3.6E-4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0451200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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