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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0457600 |
| Transcript ID | LotjaGi1g1v0457600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WRKY transcription factor; TAIR: AT3G56400.1 WRKY DNA-binding protein 70; Swiss-Prot: sp|Q9LY00|WRK70_ARATH Probable WRKY transcription factor 70; TrEMBL-Plants: tr|A0A0B2S8Q8|A0A0B2S8Q8_GLYSO Putative WRKY transcription factor 70; Found in the gene: LotjaGi1g1v0457600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96088830..96093310) extracted from Lotus japonicus Gifu genome v1.2.
GAGCTTCGTCGTAACGTGCTAAAAAAAACACAACTTGTGTTTTTTATTTTCCTCAATTGTGTGTTTTTTTCCTCCATATA TAATATAAGAGCTCAGTGTGTGGTGTGTCGCATAGAGAAAAGAGAGTGACAAAAAAAACAGTGAGAGATTCAAAGGATTC AAAAATGGAAACTATAGGTTATAGGAAGGCAATTGAGGAGCTAGTGAGAGGGCGTGAGTTTGCAAACCAGCTTAGACATG TCATCAATGGAACTGAGAATGAAAATGATGATAGGTCACTTGCTGAGAAGCTTCTGAAAGAGATCCACGTGTCCTTTTCC AACTCCCTCTTCATACTGAACCATTCCACTAGTAGTACTTCTGATCAATCTTCTTCCCATGATCATGAAGTGTGTGATGT GCAGCTCAAGTCTGAGGAGGACTCTCAATCTCAAGAGAGTAATTGCAAGAGGAGTTCTGATGTTAAGGAAAGAAGAGGGT GTTACAAGAGAAGGTAGATTACTGACTAAGTACTATTATTATTTATTAGTTACTAATTTCAGCATGTTTGGTTTGATGGT TACATACTTACATGTGTTAGAATTAATCATCTATTGTCAAATCAATTTTTGGGTTTTATATTGTATTTTTTATAATTGAC TTTATATAACTCTAAAATCAATTTTGAGATGAATAGTATGTTTGGAAATCCTTTTTGAATTGATTCTAAAATCAAAATCA ATTATGAGTATAAGCTTCATGAGGAACTTCTTGGGGCTTGAATTGATCTAGAAACAGATAAGTTGATCCAGATATGCTAC AAGTTATAAATACTAGCTTTTGCAATTTAGTTTAGAATTTTTTTAAAGACTTAATTGCACTTTTGATCCCTTAAGTATCA TGATTGTGCGATTTCAATCCCTGATCTTCAAAACGAGTGATTTGAATCCTAAAATTTTCAATTTGTGCAAATCAGGTCCC TCCGTCTTATTTCCGTCAAATAAATAACGGAAACGGCTGAGATGACATTTTTATTAAGAAAAAATTATTAATTTTATTCC ACTTAAGCATTCATTTTTTACCCTTTTTTTTCCATCCATCTCATTCTTCTTCAGCTGATAAAAAAAAAATCTCTTTCTTC TTCAAGCTTCATCAATCCCTCCTCTCCTCCATCTTCACCAACTTCCTCTTCAACCACAAAAGCCCCAAACTCAACCCCTC CTCCTCTCCTCCCTCCCCCCTCTTCACCACTGCAAAATCCAGAAGCAGAATAATACAGAAGACCCAAAACCCAAAAAACG TTTTCCTGAGTGAAAAAACTCAGAATGAAAAAAATCCAGAAATACAACTTCAACCCAGATCCCTCCTCATCCCTAATCCC TCCTCATCTCTGCCCAGAATTGATCTTACTCCTCCCTCGACAGCAGAACCACCACCACGACACCATCTCCTCAGCGAGAA CCCCCAACCTCCGAGCACCACCGCCGATGAGGTCGACCTCTCCATGTTCACCGCGGGCCAGTGAGCACATCCTGTTGGGA ACCACCACGCCATCAGTCACCAAGCCTCAACCCAGATCCGCATCGCACTGCCTCAAGGCCACTGTAGCCCGACCATCGCT CTGCACCGTGAACCACACCATGAGGGACTTGTCGTGGAGGATCTTGGGCCGGATCTTGGGACCATCGTTTCCCATGTTCT CACCCCTTTCCATTGGCTATTGAGCCTTAATCCTCACAAGAAGTTGCAGCCTTAGAATTGGGAATTTTAGGGCTTTTTAG GTGAGAGGGAGGGAGAAGATGAAGCAGAACGGTGGTGGTGGGGTTGATTTGTGGATTTTGGTGTTTTTTTTACAGTATTT AATTTTAAGTTTTTATATATGTTTTAATTTCCTTTTTATTTATTTATTAATTACATGGCATTCAAGTGGAGCCCAATGTC AGATCCACATCATTTAATGAGTGACACATATGCAATTTCCGTTATCTATTTGACGGAAATCAGACGGAGGGACCTGATTT GCACAAATTGAAAATTTTAGGATTCAAATCGCTCGTTTTGAAGATCAGGGATTGAAATCGCACAATCTTGATACTTAAGG GATCAAAAGTGCAATTAAGATGAAACTACAAATACTAGCTTCTATTTTAAATAATTCTATATATGCAAAATCAATTTTGA GATGAAACTACAAATACTAGCTTATGCCGTTTATATTATATTTTTTTCATTATTAATTCTAACTCCAAAATCAATTTTGA AATGAAGCTACAAATTAAATGCTAACTTCTGCAATTTTAATTGTATTTTTTCATAATTTTCTTAAAACTCCTAAATTTTT TTGAGATGAAATCACAAAATACTAGTTTCCAGTGTACAAAATGAGATTTTATAACATTATCTTAAAATAATATTTTTCTC AACCACTTAAATCTTCTTACAATCTCATACAAACACTTACATCCACATCAATCTTTCTACATGTACATATAATGATTTTA ATTTTGCTTCTATTGTTTTTACCTTTTTGGTCTTTCTTGTGGGTTATGTAAATGGAAATAAATCATGCCCTTCTTGGTCA TAGAAATATATTATTTGGCTGAGCTATTTTCCTTTTACTTTTTTTGGCAACCCCTTTTCTTATTCCTTCCCTAAATTCAC TGCATCTGATTGAATGGTATTTGAACTTTTTCACATAAGGTTAAATACGTTGCACTCATCAATTGATCAGTGTCTAGTTG ATTTGATGCTTTACTCATCAATCGATCAGTGTCTATTTAATTTGATGACCCCATACTTTGTTATTATTTGTCCTTTACAT ATGCGTACAATTGGACCCCATCAATTATTGTTCATCATTGATGCACATGTGTGATGAAGGAACATGTAGTAGTTAACTGT AATTAGACCTGTAATTAGTTATGCATGGTTAGGCTGCTTCTGCTGCCACAGCAAAAATGATTGCATATGTTTTAGGAACA AATTAGAAAGTTAATTAACCTGAATCTGCAACTATTGTTTTGCAGAAGAACTTCAGAATCATGGGAGAGGGAGTCTGAAA CTCCAATAGAAGATGGCCATCAATGGAGAAAGTATGGCCAAAAGGCTATCCTTAAGGCCAAATACCCAAGGTAATATATA ATGAATAAATCCCTCAGCTCATTCTTATCTCTCAATATCTCTTGTGATGATATGTTTGGTTCCACAAATTGTTCTAGAAA ATAACAAACTATAAGTCTTAGTCTTAGTACATGTTTAGTTTAGAGATTAAATAAGTAATTTTGGATAGAATTGATTCTAA AGAATTGATTATGGTAAAACTCTAAAATGAGTCGAAAGTCATATGAATCCGTTTAAGTGATTTTATTGGAGAATAACAGA AAGTCTTCTGAGATGAGCTAAAATCACTTTCATGTTAACTCAGAAGCTTGATGTTTCTCTTCAAAGTGATTTTATCAGCC TAAAAAGTGCTTCTAAGAATTTTGTGGATGAGTGATGTGAAACCAAACGCGTTAGTAATTCTGAGTAAACGTATTTAGAT TTTGTGTTAATCGTGAAACCAAACATGCAGAGAATTTAAATGGATATTCATATGTCTTATGAGACAGGAAATAAGACACA ATTTGAGAAAAGATAATCTCGATCCATGTCTTATGACTCTTTGTGTACCCATTTTGCAGGAACTACTACAGATGCACTCA CAAATATGACCAGGGATGCAGAGCAACAAAACATGTTCAAAGAATTCAAGAAAATCCACCTCTTCACAAGACCACATACT ATGGCAACCACACTTGCAGAAGGTGTCAAACCCCTGAGATAATAGTGGATGATTCTGTTTGTCCTAATTCTGACTCTTCC ATGTTCGTTAGCTTTGACAATTCTCTCCCAACCTCAGCCAAACAACAGTGCCCTTTTCTCTCATCTTTTCCATCACCTTC ATCAGTGAAAAGGAAGTGCAAAGAGGAGGAAGAGGAGGAGGCCCCTCCTTCTATATCTTCCTCCAGTGATCACCTCATCC CTTCTTCTGAGCTCACTTTCCATGATTCTCCCCTAACCTTTGATTCAGATTACATGGGTGTGATTCCTGATGTGTTGTAT GGTTCTGATGAGCTTGATGATGTCTTTGAGCCCTTCCTTGAAAGTCTTAGATGATGGCTTCCTAAGTTTTTGGTCTGTGA ATAAAGTAGTGTAGCATGTAGTAGGAGAAGTTAGATTTATTTTGTTAGCTTGGGTTCCATTGATGTAAAATATGTACTTC TCTTATCCATTTTCGATGAATAAGATATGAACAAGTTTATCATGTGTTTGCGCGCTTTTCCCATCGAGAACCTCATAATC AATTTTAATAAGATAAAATCAATTTTGGATGAAAATATGAATGTTTGGGGTCATTTTCAGAATTGATTTGAGTCACAAAC CGGAAGCTAGAGATATAAATTCATTGTTGAGCATAATCAGTTTTAAGCTTTTATAATTGAATTTCACAATATTATCCTAA A
CDS sequence (LotjaGi1g1v0457600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACTATAGGTTATAGGAAGGCAATTGAGGAGCTAGTGAGAGGGCGTGAGTTTGCAAACCAGCTTAGACATGTCAT CAATGGAACTGAGAATGAAAATGATGATAGGTCACTTGCTGAGAAGCTTCTGAAAGAGATCCACGTGTCCTTTTCCAACT CCCTCTTCATACTGAACCATTCCACTAGTAGTACTTCTGATCAATCTTCTTCCCATGATCATGAAGTGTGTGATGTGCAG CTCAAGTCTGAGGAGGACTCTCAATCTCAAGAGAGTAATTGCAAGAGGAGTTCTGATGTTAAGGAAAGAAGAGGGTGTTA CAAGAGAAGAAGAACTTCAGAATCATGGGAGAGGGAGTCTGAAACTCCAATAGAAGATGGCCATCAATGGAGAAAGTATG GCCAAAAGGCTATCCTTAAGGCCAAATACCCAAGGAACTACTACAGATGCACTCACAAATATGACCAGGGATGCAGAGCA ACAAAACATGTTCAAAGAATTCAAGAAAATCCACCTCTTCACAAGACCACATACTATGGCAACCACACTTGCAGAAGGTG TCAAACCCCTGAGATAATAGTGGATGATTCTGTTTGTCCTAATTCTGACTCTTCCATGTTCGTTAGCTTTGACAATTCTC TCCCAACCTCAGCCAAACAACAGTGCCCTTTTCTCTCATCTTTTCCATCACCTTCATCAGTGAAAAGGAAGTGCAAAGAG GAGGAAGAGGAGGAGGCCCCTCCTTCTATATCTTCCTCCAGTGATCACCTCATCCCTTCTTCTGAGCTCACTTTCCATGA TTCTCCCCTAACCTTTGATTCAGATTACATGGGTGTGATTCCTGATGTGTTGTATGGTTCTGATGAGCTTGATGATGTCT TTGAGCCCTTCCTTGAAAGTCTTAGATGA
Protein sequence (LotjaGi1g1v0457600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METIGYRKAIEELVRGREFANQLRHVINGTENENDDRSLAEKLLKEIHVSFSNSLFILNHSTSSTSDQSSSHDHEVCDVQ LKSEEDSQSQESNCKRSSDVKERRGCYKRRRTSESWERESETPIEDGHQWRKYGQKAILKAKYPRNYYRCTHKYDQGCRA TKHVQRIQENPPLHKTTYYGNHTCRRCQTPEIIVDDSVCPNSDSSMFVSFDNSLPTSAKQQCPFLSSFPSPSSVKRKCKE EEEEEAPPSISSSSDHLIPSSELTFHDSPLTFDSDYMGVIPDVLYGSDELDDVFEPFLESLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 251 | 245 | 7.1E-76 | – | |
| PANTHER | 7 | 251 | 245 | 7.1E-76 | – | |
| MobiDBLite | 62 | 97 | 36 | - | – | |
| MobiDBLite | 71 | 97 | 27 | - | – | |
| Gene3D | 105 | 187 | 83 | 5.3E-23 | ||
| ProSiteProfiles | 119 | 182 | 64 | 20.048 | ||
| SUPERFAMILY | 121 | 185 | 65 | 1.11E-22 | ||
| SMART | 124 | 186 | 63 | 1.4E-33 | ||
| Pfam | 125 | 185 | 61 | 2.7E-23 | ||
| MobiDBLite | 239 | 262 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi1g1v0457600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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