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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0459400 |
| Transcript ID | LotjaGi1g1v0459400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT1G24480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|O14321|ERG6_SCHPO Sterol 24-C-methyltransferase erg6; TrEMBL-Plants: tr|A0A0L9URN8|A0A0L9URN8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0459400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96277935..96279422) extracted from Lotus japonicus Gifu genome v1.2.
CTAAAATGTCAGAGACACCATCCTAACTAACCTCAAGTTCCTTAAATTCTGGTCTCCTTTTATGCATGGATTTCCACTTA CAATAACCATACACCATGTAACCAAGCTACAAATCAGGGAAACGCCAAGTGCCCCTAAGTTAGTTACCCATATGAGAGGT AGCTTGACTAAGCTATGAGCCACATCAACTCATGAAGCCTTTACTTATCATAACGATCATTATAAACGGCGTATCTAACT ATCTATCAACCTTTTTCATTTGAATTCTCTAAATATTGGTTTTTTTATAGGAGTACGTTTTTTGTTCTTTGGTTTGGTTT GTTTTTTCTACTCTCTCTTTGGTCTCAAATTTTTGTTTCTAGAAAATTTCATGACCCCTCAAGCTTTTCCACACCCATTT TCTCCCTCCCACCTCATCATCCATCACAATCTCATTCTAAAGACATAAATCACAATAATGTACAAAGCATATCATCAACC AGAAACATGTATGGCTTTTTTCCTTTTCTCAGGCATTAACATTAAATAACCATACACACACACACACACACATGAAAATC AATCTGACAAGACCATTCATCTTAAGGTGCTTCCTCATCTCCCTCTTCCTCTCCCTCCCTTTCCTCTTTCTCCACTTGTT CTCGCCTCGACAACAACCCCATCAATCACACACCAACAAAGATCTCACGATTCGACCCGGTTACACCTCCTATGAGGCCT ACATTCAACGCCAGCTCAACAAGACCCTCAACCCGAGGCTCCGAAAAGTATGGACAACCCGCGACTGGAATAGGAAGATC CCGGTTTTCGCGCGGTTCTTCGAGGAACTCAAAGAAAAGAATCTTCTAAAAAACGCGTCCAAGGCATTGTGCATCGGTGC ACGCGTGGGGCAAGAGGTGGAAGCTCTGCGGCGGATAGGGGTGGTTGATTCAGTGGGAATCGACTTGGTCCCGTACCCGC CGCTGGTGGTTAAAGGTGACTTTCACCACCAACCATTTCCCAATGACATGTTTGATTTTGAGTTCTCCAATGTGTTCGAT CATGCGTTGTACCCGCAACAGTTCGTGGCTGAGATTGAACGCACGTTGAAGCCCAACGGGGTGTGCGTGTTGCACGTGGC TCTGTCGCGCCGTGCTGATAAGTACTCCGCTAATGACCTCTACAGCGTCCAACCCCTCATTGAGCTTTTTAATAACTCTA TTTTGGTTCATGTTCGAACCGTCGATGGTTTTGGATTGGACACTGAGGTCGCATTTCGAAAGAAACAAACCAGAAACCGC AAATGACTCATCATATATCTAATTAGTTTTTCTCTCTTTACTTTTACTTTTTTTTTTCATTTTTAAATAGTGACTTTTCT CTATTTCTTTTTTTTCGCAGTAAATTTGAATGGAAATTTTGTATATATAAATACAGTTTGTACATTGTTTTGTTCTCTGA AGAAGTCCATAAATGGTGGATGATGAATATGCACTTTTTCAATATCAG
CDS sequence (LotjaGi1g1v0459400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATCAATCTGACAAGACCATTCATCTTAAGGTGCTTCCTCATCTCCCTCTTCCTCTCCCTCCCTTTCCTCTTTCT CCACTTGTTCTCGCCTCGACAACAACCCCATCAATCACACACCAACAAAGATCTCACGATTCGACCCGGTTACACCTCCT ATGAGGCCTACATTCAACGCCAGCTCAACAAGACCCTCAACCCGAGGCTCCGAAAAGTATGGACAACCCGCGACTGGAAT AGGAAGATCCCGGTTTTCGCGCGGTTCTTCGAGGAACTCAAAGAAAAGAATCTTCTAAAAAACGCGTCCAAGGCATTGTG CATCGGTGCACGCGTGGGGCAAGAGGTGGAAGCTCTGCGGCGGATAGGGGTGGTTGATTCAGTGGGAATCGACTTGGTCC CGTACCCGCCGCTGGTGGTTAAAGGTGACTTTCACCACCAACCATTTCCCAATGACATGTTTGATTTTGAGTTCTCCAAT GTGTTCGATCATGCGTTGTACCCGCAACAGTTCGTGGCTGAGATTGAACGCACGTTGAAGCCCAACGGGGTGTGCGTGTT GCACGTGGCTCTGTCGCGCCGTGCTGATAAGTACTCCGCTAATGACCTCTACAGCGTCCAACCCCTCATTGAGCTTTTTA ATAACTCTATTTTGGTTCATGTTCGAACCGTCGATGGTTTTGGATTGGACACTGAGGTCGCATTTCGAAAGAAACAAACC AGAAACCGCAAATGA
Protein sequence (LotjaGi1g1v0459400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKINLTRPFILRCFLISLFLSLPFLFLHLFSPRQQPHQSHTNKDLTIRPGYTSYEAYIQRQLNKTLNPRLRKVWTTRDWN RKIPVFARFFEELKEKNLLKNASKALCIGARVGQEVEALRRIGVVDSVGIDLVPYPPLVVKGDFHHQPFPNDMFDFEFSN VFDHALYPQQFVAEIERTLKPNGVCVLHVALSRRADKYSANDLYSVQPLIELFNNSILVHVRTVDGFGLDTEVAFRKKQT RNRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 239 | 239 | 1.4E-120 | – | |
| PANTHER | 1 | 239 | 239 | 1.4E-120 | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 9 | 30 | 22 | - | – | |
| Phobius | 31 | 244 | 214 | - | – | |
| Gene3D | 79 | 236 | 158 | 6.3E-11 | – | |
| SUPERFAMILY | 83 | 225 | 143 | 2.84E-13 | ||
| CDD | 104 | 191 | 88 | 0.00229645 | – | |
| Pfam | 108 | 187 | 80 | 1.6E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0459400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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