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LotjaGi1g1v0472800.2

Overview

Field Value
Gene ID LotjaGi1g1v0472800
Transcript ID LotjaGi1g1v0472800.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Serine/threonine-protein kinase RIO1; TAIR: AT2G24990.1 Serine/threonine-protein kinase Rio1; Swiss-Prot: sp|Q9BRS2|RIOK1_HUMAN Serine/threonine-protein kinase RIO1; TrEMBL-Plants: tr|A0A151TBL1|A0A151TBL1_CAJCA Serine/threonine-protein kinase RIO1; Found in the gene: LotjaGi1g1v0472800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:98335463..98339318) extracted from Lotus japonicus Gifu genome v1.2.

ATGGTTTTATTCAAGATGCTGAACAGGGGTGTGTTTAACGATATCAACGGATGCATTTCAACTGGAAAGGAAGTATGTGA CACACCAGAAGCCTTTATTTTCATGTTTAAGTTTGTTTTTTCTTGATCTTATGGCTTTACTTCTATGATGAGGACTTTAT GTGGATAATTTGTTATGTGATACCAATCCATCGTATTTTTATTTTGACATTTCTTGTTCTTTGACAGGCAAATGTTTATC ATGCAACCAAAAACGATGGTCAAGAACTTGCAATTAAAGTGTACAAAACATCTGTTCTGGTATTTAAGTAAGTACTCTAT GTGTTAGCTTGATTTAGCTTCTTCTGTTATTATAGATTATGTTGAAGGCCGAAAATTATGAAAGATTTACATAAGAGAGC ACTGGAATCTTTATTCAAGAAAACTTTTGTTATTATTTTTTTATCATGAAAAAGTTTCTTCGAGGGGCTAGATCCTGGAT ATTATGATATAATATATTGTGAAAGAATTTATGGAGTTATCTTGCCTTTAGAATTAGTGAAATTGTCTTGATACATGTTC TTCTAATAAATTCCTTATATACATGCAATGCACAAATGCAGCACAAATTGTTTTCAACACATTGAATGGAAACCTGGTTT CTTGAACCAAAGGTGCCTTTTTTTTTTATTTATCATATGAACTGAACTTTATAATCATCTGGGTGCCTTCAGGGATAGAG ATAGATATGTGCAAGGAGACTTCCGGTTTAGGAATGGATACTGCAAGCATAATCCCAGGAAAATGGTAAAAACTTGGGCA GAGAAAGAAATGAGAAATCTTATGAGGTTTGCATTTGTTCTTTTTTCGTTTTTTTTTGTTAGCTTATGCATCACAGTAAA AACTGTTAATGAAATTCCATTGAAATATGATATACTAAATTATACTATTAAAAGAAAAGGAGAGAGAATTGAAGGAAGGT AATCATGTCGGTCAACATCATCCGCTATGCATTAGGAGTTTTGTTATTAATACTCCTACCTGTAGGTTATGGCTTGATCC GTTGCTAACCTTAGATAATTAATATGTTAGCTTTTACTTAAACCAGGAACTTCTGTAGTCATCCTTTCTAATAGTTGAGA TCTCTGTTAAGAATTTTATTTACGTCTTAGAGCAAATAAACTCAAATAAACCTATATGAAGTGTTAATCTGTTCTGGAGT GAATTGTCATGGTTGTCAATTTTTCCGAGCTTTTGCTCTTTTTTCCTTCTAGAGTTTTTTCTTCTGATAAAGGGGGCTCC TTGTTTTGCTTACTCCCTGAGCATGTGGGTTTATTCCTTGGGCTGATTTCAATAAAAAACTTTGATTATTTTTTTTTTCC TGAGCTGTTTCGTTCTTTTGCCCTTTCTATATTGGATTGCAGGCTAAAAGCAGCAGGGCTTAGGTGCCCTACACCACATC TTCTGCGGCTACATGTTCTGGTTATGGAATTTATAGGTATTGCTTTATCCTGGATTTTGAGAAAATACAAACTGACGATT CTGATCGATTGTCCATATTTAATCAGTTGCTCAAAATTGATCATATGGATTATCAGTTTATAAATGTCTACATTTGAATA AAAAAAATGATAGAAGAGTAATGCGTAGTTTAATTGCTCTGTTCACTTATATTGAAGATGGAACTGCTAATAGCCACCCT CTAATTATCTATCACCAGTCTTCGAAAATTCCGAATTCTTTCTGTAGCATATATTATATTATTCTGGTAATGTATACTGC AGTATAGACTGAATAAATGCAAGTACAATTTTAATTGAAGTTCCGTGGTTATTTGTTTCACATAGGAAAGACTGGTTGGG CTGCTCCTCGTCTCAAAGATGCTGCTTTATCTCTAGACAAGTTACGGGAAGGCTATGTGGAGGTGGGTGATACAATAGTC TATTAATGTTTGCATGGTTTAGAAGTTAGAACATATTCCTTTAGCAGGTCTCTTGATAGTGTGTTGTTGATACTTTAACA TGAGGTTGTTGTTTAGGTCCTTGGAAGCCTGCTATCTAGAATGATTACTAAAACCATACTTGTTGGTTAAAGCCTGAAAA GTCTTTACCGTCTCCTTTGAGTGTCATTTAGGGAAACACTTGTCCCATGTTTTTTACTCTTCTAAATTCTAAGGGTGCAT GTTGTAGTCTGTTCTGCCAATTTTTGAGGTTGAAATTATGTGAGCATTTGTATTTCAGATTATTATTGCAATGCGGACGC TGTATCAAAAGTGCAAATTGGTGCATGGTGACCTTAGTGAATATAATATACTTTATTTTGAGGTTAGCATATCCTTCTAC TGTTTCTATTTCATTCATTAAATGTATGTGTCAACAGTCAACGAATTTTTTTCTTAATTTGTCAGGGTCACTTGTATATT ATTGATGTTTCTCAAGCTGTTGATCCTGACCATCCTCATGCTCTTGATTTTCTGCGTGAAGATTGTGTTCATATATCTGT AAGACTTATAAGAACTTGCTCTAAATTGCATATTTCTTGTGTGTTGGTGGGGCTAAGGGAAAAGTGTGATTAAGTAGTTG TTTCTCTTGTAGGACTTCTTCAAAAAGCATGGTGTGGCTGTCATGACAATAAAAGAACTGTTTGATTTTATTGTTGATGC ATCCATTGCTGATGATGCTGTGGATAGCTATTTGGAAGAGGTATTTGTCATTCTCTAATTATTGTTACATTTTATGAACA ACTTCAAAGTAATCATTGTGGTATTCAAAAATTTCTAGGTGCAACAAAAAGTTTTAGCAAGAGGAGATTTATCCGTGGAG GAAGAAATTGCGGATTCTGTATTTGTGCAGGTAACCTTCCTTTTTATGTCAACTTCTTGCTTGGAAAATGCTATCTAATT TCCACTTTCTTTTCAGGTTTTAACTTTTTTACAGAAAATAATATGTTGTTGTTTGTTTCCTTTATTAAACTTTGAAATCT AAGAACAAAGTGATAGTATTTTTGTAATGGAAACAGAATATAGGAAATGGCATCTGAGAGGTAAGTAACTAATACACCCT AACAACCAATTCTAAATCTAAACATGATTGTTGGAATATTTTTTTGTTTGAACTATAGGTATACTCCACTTAGGCAATCT TGTTCGAGCCGGGTAGTTGGAATATGATATCAACATAGAAGTTTATTTATTTCTCATAAAATTGTAAAATTCATTCCTTA TTTTCATCTAAGCCGCCACTTTTCTTATTTTCTTCTATAAGCAGTAGATATGAGCTTGATTAATCATTTTTTTTTATCAA GAACTGAAATGGGGTTCAGAACTTCAGATTGATCTTTGAATAGGTTTGTGGTCACATTGATCTTTTATGTCCGTTCTTAC ACAAGTTTCTGAACTCTTGTTACAGTCTTACATTCCAAAGAACCTAGTTGATGTTAAGAATGCTGAGGAGGATGCACAAC GGATAGCAAGTGGGAAGGACACCGGCGATTTATTATATAAGACCATTACAGGGCTTAAACACGCTGTGCCGAATACCCAG CCTTCCCTGCGAGATGGCGAGCAAAGGCAGGAATCAAGTCGTATAGAAGATTCATGTTTAATTTCTGACAGTAAATCTAG CCTCGCAGAGGGTGATGATGCGGAGTCTCAATCAGATCAGGACGAAGATAGTGCTACTGATCCTGAAGAGGATGGGGATT CATCCTCTGGAAGTGAAACCGGTTCTCCTGTGGATAAGAAAGCAGCAAGAAAAGAAGCTAGGAAGGAAAACAAGAAGAAG GTGAAGGAGGAGAAGAAAGAAGCGCGGAAAAATAAAGTCCCTAAAGCTGTGAAGAAAAGAAAGCAAAAAATGGCAAAAGC TCGTAAGACTAGATAG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0472800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTTTTATTCAAGATGCTGAACAGGGGTGTGTTTAACGATATCAACGGATGCATTTCAACTGGAAAGGAAGCAAATGT TTATCATGCAACCAAAAACGATGGTCAAGAACTTGCAATTAAAGTGTACAAAACATCTGTTCTGGTATTTAAGGATAGAG ATAGATATGTGCAAGGAGACTTCCGGTTTAGGAATGGATACTGCAAGCATAATCCCAGGAAAATGGTAAAAACTTGGGCA GAGAAAGAAATGAGAAATCTTATGAGGCTAAAAGCAGCAGGGCTTAGGTGCCCTACACCACATCTTCTGCGGCTACATGT TCTGGTTATGGAATTTATAGGAAAGACTGGTTGGGCTGCTCCTCGTCTCAAAGATGCTGCTTTATCTCTAGACAAGTTAC GGGAAGGCTATGTGGAGATTATTATTGCAATGCGGACGCTGTATCAAAAGTGCAAATTGGTGCATGGTGACCTTAGTGAA TATAATATACTTTATTTTGAGGGTCACTTGTATATTATTGATGTTTCTCAAGCTGTTGATCCTGACCATCCTCATGCTCT TGATTTTCTGCGTGAAGATTGTGTTCATATATCTGACTTCTTCAAAAAGCATGGTGTGGCTGTCATGACAATAAAAGAAC TGTTTGATTTTATTGTTGATGCATCCATTGCTGATGATGCTGTGGATAGCTATTTGGAAGAGGTGCAACAAAAAGTTTTA GCAAGAGGAGATTTATCCGTGGAGGAAGAAATTGCGGATTCTGTATTTGTGCAGTCTTACATTCCAAAGAACCTAGTTGA TGTTAAGAATGCTGAGGAGGATGCACAACGGATAGCAAGTGGGAAGGACACCGGCGATTTATTATATAAGACCATTACAG GGCTTAAACACGCTGTGCCGAATACCCAGCCTTCCCTGCGAGATGGCGAGCAAAGGCAGGAATCAAGTCGTATAGAAGAT TCATGTTTAATTTCTGACAGTAAATCTAGCCTCGCAGAGGGTGATGATGCGGAGTCTCAATCAGATCAGGACGAAGATAG TGCTACTGATCCTGAAGAGGATGGGGATTCATCCTCTGGAAGTGAAACCGGTTCTCCTGTGGATAAGAAAGCAGCAAGAA AAGAAGCTAGGAAGGAAAACAAGAAGAAGGTGAAGGAGGAGAAGAAAGAAGCGCGGAAAAATAAAGTCCCTAAAGCTGTG AAGAAAAGAAAGCAAAAAATGGCAAAAGCTCGTAAGACTAGATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0472800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVLFKMLNRGVFNDINGCISTGKEANVYHATKNDGQELAIKVYKTSVLVFKDRDRYVQGDFRFRNGYCKHNPRKMVKTWA EKEMRNLMRLKAAGLRCPTPHLLRLHVLVMEFIGKTGWAAPRLKDAALSLDKLREGYVEIIIAMRTLYQKCKLVHGDLSE YNILYFEGHLYIIDVSQAVDPDHPHALDFLREDCVHISDFFKKHGVAVMTIKELFDFIVDASIADDAVDSYLEEVQQKVL ARGDLSVEEEIADSVFVQSYIPKNLVDVKNAEEDAQRIASGKDTGDLLYKTITGLKHAVPNTQPSLRDGEQRQESSRIED SCLISDSKSSLAEGDDAESQSDQDEDSATDPEEDGDSSSGSETGSPVDKKAARKEARKENKKKVKEEKKEARKNKVPKAV KKRKQKMAKARKTR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS50011
1 318 318 8.683
IPR000719
PANTHER
PTHR45723
1 412 412 4.5E-196 –
SMART
SM00090
1 220 220 2.1E-109
IPR000687
PANTHER
PTHR45723:SF2
1 412 412 4.5E-196 –
Gene3D
G3DSA:3.30.200.20
12 114 103 3.0E-16 –
SUPERFAMILY
SSF56112
15 201 187 1.66E-27
IPR011009
CDD
cd05147
15 204 190 2.39679E-148 –
Pfam
PF01163
26 213 188 2.0E-76 –
Gene3D
G3DSA:1.10.510.10
120 261 142 6.8E-51 –
ProSitePatterns
PS01245
153 164 12 -
IPR018935
MobiDBLite
mobidb-lite
299 414 116 - –
MobiDBLite
mobidb-lite
337 357 21 - –
MobiDBLite
mobidb-lite
367 394 28 - –
Coils
Coil
369 394 26 - –
MobiDBLite
mobidb-lite
395 414 20 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0472800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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