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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0474900 |
| Transcript ID | LotjaGi1g1v0474900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trypsin inhibitor; TAIR: AT1G05660.1 Pectin lyase-like superfamily protein; Swiss-Prot: sp|Q41066|IBB2_PEA Seed trypsin/chymotrypsin inhibitor TI5-72; TrEMBL-Plants: tr|I3SII1|I3SII1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0474900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98546614..98554529) extracted from Lotus japonicus Gifu genome v1.2.
AGACCTTATCCGACGGCTTTACTTCATCAACTACTTCGCCTATAAATGGACCTATAGGCTATAGCTGCTATGGTGAAAAA GAAAAGGAGAGTGAGAAAGATGGAGTTCAACAAGAATGGATCCGTGAATGTTGCTTTGCTGCTTTTCCTCTTGGCTTTCA CTGCAGCTGTTGTTGCTGATGCACGTAGTTTCGACCCAAATTCCTTCATCGCTCAAGTTCTCCCAAAAGGTACTGATGAT ACCAGTTACTATGTCAAATCAACCGCTACTGCATGCTGTAACAGTTGCCCCTGCACAAGATCAATCCCTCCCCAGTGTCG CTGTACAGATATTGGGGAAACCTGCCACTCTGCTTGCAAAGCTTGCATTTGTACCAGGTCAATTCCTCCACAGTGTCGTT GTTTAGATATCACTAACTTTTGCTATGACCCATGTACCCCTGAAGGTGAAGCTCACTAAGAATGAGTTAACGTTCCAATT ACTATATATGATGTGTGGAACAAAGTTACTTAAGCTTTGTTTTCATGTAATGTAATGGAAATGAATAAATAAATGGAATA AAACTATGACCCTGCAGTTAGTTTGTTTTCATCAAACTCACTGCATGTCAACTGGGTGTTTCTTTTAGTACTCTTGTCTC GTTTTTGAAATAATTAATTTGTTTGTGAATTACAAAATAAAAGACTTCTATAAAATCATATATAACAGATCAGGATTAAT TCATTTTTGAACAACAGGTGATCTCTAAATAAGAATTGAGATCACCAGTAATATTCAAGAATAATGACTTGTCCTGCAGT TTGACGAGACCACTAAAATTTGACTAATATATATTTGCAATGATTTTTTAACTATTCATTTCACGGTTAGAATCCATGAC GTTGAAAAATGAATTGTTGGGGATCCGGATCCCTTTTGGAGGTGCTAATTTGTAAGTTCAAATTCTAAAACTTGGTTGTG GTTATGCAGATTATACTCTTTTATATGTGGGATATATATAATTGGCAAATTCAAATTTAATTTTACCGTAGCTATATATA TGGTATGGACCAGGGTAAAAAGTTTTTTATGGACAATATGATAATGAAAACAGTTTTAAGTATCAAATCCAATTTTATGA TGAACAATATGAAAATGTTCTTCAAAGTCAAAGACTAAGTAATTTGCAAATTTTGGATGGCAATTTATTGCTAATCAAAT TCCCCTACCCATCCCAACAGGGTACAGCCTTTTTTCCATGGACGTTGTGTTTTTTTAGATAAACCATAATAACATTAATA AGGCACAAGGGTGCCACACTGCCACCCATAGGACAAAGAAAAGATTACACGAAATAAGAAAACAGGGGGAAAGAAAAAAG ATAGAAACAGGGGAGAAGAAGCAATAACAGAACAGATACATAGCTGAGTAAAGAAAAGAAAAACCCACAAAATACAGCCT AACTTGTATTGTCAAAAAGCTGCAATATATAAGGTCCAAAAACACCACCGCCTACAGCTGATATTCCGCACCCTTCCTCC AGCAAGAGAAAACGCAAGGATCAAGAGCTATGAAACGAGACATAGTCCCTCAACTATCGACCCTTCTAGAGAACCCTGTT TTTTATCTTCTTGTTATCTCCTCTTTTATTAGTGATGGGCACTGAAGATAGAGACTGTGCTGCTGAGAGACACAGGACAA GACTTTGGGTGTAGATTGAATTTTATGTGTCGTGCACCGAAGCTATTATGCCATCGTAGCTATCGGTGAGTAAGAGCTTA GGACTCAGGATCATGCATTTTGTAATCCGTTTTGGTTATATGTGCACTTACTTAAGAAAGTTTGTAATGGAATATGTAAT TTAGAGATATATTAAGTTTGAAGTTGTGGTTAATAAGGAAAAATGTTTAAATTTTTAGTAAATTAATGCATTATTAGACT TTAACTTGCATCATAAGTTTGAGCATCACACAATAATGGAAAGTCTGATGACGAATTGGTTACGTGCGATGGGACTCAGC TTCATTACATCGAGGCTCACCGGTGGCAGTGATGGAGCGAGATTGCCAAAGTGGGCGCGACAATGGCTGCGATTTCTACC ACTGGGCTTGTAGTGACGAAATTGGGGAGGTTTTAGTATAGGAAGGGTTTTCGGTTGTTGATTGGCAGGGATGAGGATTT CTTTCATCTTCCCTTTCTGTTTGACTGTGGTGTGGTTTGAGGTTATTTGTTGTGGGGTGGTGCAACGGCTGAGGTAGGTT TTTGGGTTTGAAATGATGAAGACGATAAAAGAAGATGAAGATGACGAATTTTTTGGGTTTTTATTTCTAAATTCATAATA ATTTTTAATACATAATAATTTTGTAGCTCATATTTAATTATAATAATATTCATATGTACAATTAATTTTTAATATTTTTT CAATATTATATAGTTTATTTCAAATATAAACTAGAAATATTTATGAGTGTAAAAGGTTAAAAAGAGTATTATGTTCTGTT ATTTTTAGTTCTACTTTTTTTTGAGTGAACTACCATTCAAGGAGCATTTTGAATGCTTTAGCAAACACGAAATAAAGTGT ATATGGTCCCTTATGTTTAAATCCGTCTATCAAGGTGCTTGCTACCATACCTTAAGTCAGAGTAGGCTATGATACATGAA ATGATGTGTACCAACTAAATAAATCCAGAGTGTTATTAATTAAGCACTTTCTCTTTTTATTTTTCTATGAAATAACTGTT ATTATTAATTTCATTATTTACTTAGTAGTCATCGGTTAATGTATCAATTGAGAATGATCCTCCTCCTCCTCCATCTAGTT CTTTATCTCCTTCAAACAAAATTTCAGAAAATCAAACTTCTTCAAACCCAAAAAAAAATCCCAAAGCATTTCACATCAAA AAAACCAAAACACCATACCACGTAGGTTCTGCACAATTGAAAGCTTGTTTTGGGGAACCCAGTATAAAAAAAAAGGCTTA ATTGCACTTTTGGTCCCCCAACTATCGCTTTCCTGCAAAATTGGTCCTTAAACTTCAAAATTAGCAAAAATGGTCCTCCA ACTATACATGCCGTTGCAATTTTGGTCTTCCGTTAGCATTCCGTCAGGAAACTAACGTGAGAAGGCTCACTCACATGCTT CTCACGTGACCATTCAGGAGAGAGAGTGATGACTGGACAAACATGTGTGTGTCACGTGACACTATGAAGCCCCAACGGTC ATCTCCTCCATCATTGTCTTCTTCACCTGAGCCCTTAGGAGAGGGGTTTTCATTACTTGCATGTCCTTCTGAAATCACTA CCTGGAAATCGAAGAAGAAGGATATGCGAGCACCTCCAAGGGAAGGGTGGAAGGAAATGGGTGGTGGGTCTCAAAGTTGT GGCTCGTATTCTGGTTCACAGAGGAGGAAGGGGGGTCCGTTGTGCGATTGTGGTTTTGAGGCTCCTGCTGTTACATCCTG GACTGGTGAGAACCCTGGGCGAAAATTTTATGGTTGTGGACTGTTCAAGGTTCGTGTTCTTCCCCCATTGTTTTGTCATT TCTCTCATAGATCTTTTATGTGGTCTCTTCTTCCCCATTGTCATCGAAAATTATTTGGTCTCTTATGTGCTCTGATTTTG CAGATTCATGGCAAGAGAGTATGCAGGTTCTTTGTATGGTATGATGAATATCATGGACTAGGAAAATATGACAAGTCTGA TGAAGAAAATGCAAGGGAGAAGAAAATTATTGGTTCACTGCTGAGGAAGATTGATGCTATGAAGAAGAAGGAAAGGCTTT TGGAGATTTCATTGGGGACTTGTATTGTTTTGATCATGGCTTTGATCATTCTGTTGGTTTTCGCTGTTGTATTCAAATAG GGGAAATTAGGTCCACTGTAATTTGTTTTAGGTGTAATGTTGTTATGTATTAATTAGAGTCTTGTATGATTTCTATGACA TTTAAGTTGATGTTTCATGAATGAGTTAGAGACATGTTATTATTCAGAATTGTACCATGTCTCTTTTTAGCCATCTACAA ATTGAACCATGATAAACCAACAAAGAAAGAACTAATTTGAAACAATGAAATCACTATAACAGTTGAACATAACCAACAAC ATAACATTTGCACTTTGGCGCAAATTCAGAACTAAAGCAGCAAAAGTGGCACTTAGGCCAACAACATAACAAAATAACAG TGGACATCCTTGACATAAAAGTGGCCCTGCAATGTGATCAAATTCAGAACTAAACCAACAACATAACATTTGCACTTTGG CCTTGCATTGTCATCAAATTCATAACTAAACCAACAAAATATTGAAGTGTTATCCTGCAAAATGAAGTGGACATAACATA GGCACAATGAACATAACATAGGCACTTAGGCCTTCCATTGTCAAAACAAAATAACATTGAACATAGCATTGGCACTTAGG CCTTCAGAACAAAATAACATTGTCATCAAACACACATAGTCAGATCACTCAAGTGGCACTTAGGCCTTAAGAACATTATA GAAACCTTAAAATAGAGTCACATTGCTCAAAGTCATAAAGCACAAAAGTGGCATCTATGCCTAAACCACATTACAAATTT TCAATCCTAATACTACTTTGTTCCACTAGCTTCTCCAAGCTTCCTCTTCTTTCCCCCCTTTGCAGTTTTTGCTTTAGTTG GTTGTTTCCCTTTCCCTTTCCCCTTATCTTTCTCCTTTGATCCAGCTTCATTTGTTTGAGTCTGTGGAGCCTGCGGAGGC TGAGACTGGCTAATAGGAGCTTCAGGCTGAGACTGAATCACAGGAGGTGCATCTTGTGTTGCATTTTGAGTAGTTTGCAC TTCCCTCTGCTCAGGCTGCAGTATTTGAGTAGTAGTGCCCCAGGGTGCCTGTACCATAAAGCTTTAAAAGCCTTATACCC CAATCTAAATACCTCCTTACCCATCTCAATAGAAGATATTACATCTGTGTCCCACTCAACCAATTGTTCTACAGAACCAC CAACATATTCAATTCTGGGTTCAAAGGTCAACTTTCCACCATGATGCAGCAGTATTTTTATACTATTAGTCACTAAGGAG CTGGACAAAACAAAGGACAAGATTAAGATACAACATTTAATCCAAACCACAAAAGGACAACAAACAACATTGATTTAATT CAACAACCCATTCAACATGACATAAAGATAAAGGGAAGAATAAAAAATCTTACCTTCGCACATGGGTAGAGGGCAAAGGA ACAGCATCCCGAAAAAGTTCACGTTCTGGGACCACACCACTTGCTTCTTCCTTGTCACAGTCCACGTTCTTCTCAATCGC TTTCCTCGGGGTTGTCTTCTTCGCAAATGGTTTCTTCGTCGGGGTCCCCTTCTTAGCACCGTTGAGCTTGTTCGCCGCTG CTATCTTCGCCGGGGTGGTTTTCTTCACCGTTGCCTTCTTCGTCGACGTCGTCTTCTTCGTCGGCGTCATCTTCTTCGCC GGCGTCGTCTTCTTCTTCGCCGGCGTCGTCATCTTCTTCGCCGTCATCGTCTTCGCCCTCCTTCATTCTCTTCTCCTAGG GTTTTCTATTAGCTGCAATTTTGGTCCCTTAGGTTATGAAATTGAAAACCCTAATTTTGACCTGATTACACCCTTTAGTG TCACGTGACACGCACATGTTTGTCCAGTCATCACTCTCTCTCCTGAATGGTCACGTGAGAAGCATGTGAGTGAGCCACAT CAGCTTCTCACGTTAGTTTCCTGACGGAATGCTAACGGAAGACCAAAATTGCAACGACATGTATAGTTGGAGGACCTTTT TTGCTAATTTTGAAGTTTAAGGACCAATTTTGCAGGAAGGCGATACTTGGGGGACCAAAAGTGCAATTAAGCCAAAAAAA AATGAAAAAAATACTCGAAACAGGGATCACCGGGTAAAAAACATCACCGTTGTCCATCCCAGAAACCTCCATCACCCAAA ACCGAGATCAGACCACTTCTGTCAAACAAAAGTTTGAAGCTATGTCAGACAACCATCAAATTAGAGAAGAAAAAAGCCCA AAACCCAGAAGGAGGAGGAGGCACCGTCTTAGATCTCTCAGTCGTTTTCGAATCTCAATCTGCGAAGGACATGGGTCAAG CTCTTGATCTGCGAAGGACATGGGTCGAGCAGTGGTGGGGATTCACCTCAGGTGAGAGAAGCAAAAATCCCAAAAATCAG AAGGAGGAGGAGGAGGCACTGTGCGCGATTTGGAGAAGGTGGAAGAGGATCTGTCGGGGGAGGATCGTTCGGCGGTGTGG GCCCGAGGATTCAACCTCTGAAACCTTAACTTGGTCATGAAGAATTAAAAACAACAAAAGAAAGAGCAATAATAGATTGA TTTCAGATCCTATACTTAACATAGTATTTTGTGTTTTAAATTTGATTTGCGTTTTTGAAGTTTGATTTTTTGGGTTTGAA GAATTTAATTTTCTAGAATTGATTTAAGAAGATGAAGAACATGATGGAATGATGTTTGAAGGTTTTTTTTATAGGCAAAT GTTAGTTGTTAGAAATGTTAGAAAATTAATCCCTCCTCTGAGTTCAAACACATGATCCTTTACCTTTTATCTCATTCAAC CCTTATGTCTCTAGCTCTCACAACTTCGGTTACCACTCTCTTTTTAATGATGTTTGAAGGTGATGAGGAACTCGTTGAAA AGTTCCAGAAAATATTAATTTTCTAAGGAGTGTAAAGTTTGGGACCAGAAGTGCGATTTTCAAAGTTTAGGGACTATAAT TGCACATTCGCATTAAGTGAAGGACTAAAAGTGCAATTAAGTCTTATTGACAGTCAGTCTGCCGTTAAATGTGAGATTTT GCCATTGTCTCTATAGTTTAGTGGTGTCCAAAGGGAAGAGGTCGCAAGAGAAAAAGGAAAAGTGGGGATTTAAAGAGATA AAAAATGTGTAAAGGGTCTAGGGTTTGAATTCTAAAAAAGATTAATTTATTAATATTCCTAACAACTAACATTTGCCTAT ACAAAAAAGTACGGCCAAAATTGTCAATTTTTTAAAATGTCCATTAATTATCAACAATCTAGGATGTGAGTAAGTTCGCC TGTCAAACTTGTGGCCCGCGGGTACTTTTGAATTGTGCCTCATCGCATATTTTAAGGCACGTGTATGTCATTTCTTAAAC AAAAGAGGAAAAAACAAGGAAAAATAAAATAAAATTACACCTTATCTTATTTCCTATGGATGTACCAAAAAGAATCTTAT TTCCTATGGACCAAAAAAACTAAGACATTATCCGGGGCTTTACCTCATCAATTACTTCGCCTATAAATGGACCTCTAGAC TATAGCTGTTTGTGAACAAGAAAAAAGAGTGAGAGAGATGAAGTTCAACATGAAGGAATCTATGAATGTTACTATGCTGC TTTTCCTCTTGGCTTTCACAGCAGCAGCTGTTGTTGTTGATGCACGTTTCGACTCAGATTCCTTCATCAGTCAAGTACTC CCAAAAGTTACTGATGATACCAATTACTATGTCAAATCTACAACTACTGCATGCTGTGACAGTTGCGTCTGCACAAAATC AAACCCTCCCAAGTGTCGCTGTACAGATTTTGGGGAAACTTGCCACTCTTGTTGCAAAAATTGCATTTGTGCATTGTCCT ACCCGCCTGTTTGTCGTTGTTTAGATATCACTGACTTTTGCTATGACAAATGTACCCCTGAAGGTGAAGCTCACTAAGAA TGAGTTCCAATTACTATATATGATGTGTGGAACAAAGTTACTTAAGCTTTGTTTTCATGTAATGTAATGAATAATTGATG ATGGAATAAAAACTATGACTCTGCAGTTAGTTTGTCTTCCTCAAACTCACTGCAAGTCATGTGTTTCTTTTAGTGCTCTT CTTGTCTTGTGTTAGTACTTAATTAGTTGAATTATTTTCATTTTTAAATGAATCAGTTTGTCAACTACAAAATATA
CDS sequence (LotjaGi1g1v0474900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAAAAGAAAAGGAGAGTGAGAAAGATGGAGTTCAACAAGAATGGATCCGTGAATGTTGCTTTGCTGCTTTTCCT CTTGGCTTTCACTGCAGCTGTTGTTGCTGATGCACGTAGTTTCGACCCAAATTCCTTCATCGCTCAAGTTCTCCCAAAAG GTACTGATGATACCAGTTACTATGTCAAATCAACCGCTACTGCATGCTGTAACAGTTGCCCCTGCACAAGATCAATCCCT CCCCAGTGTCGCTGTACAGATATTGGGGAAACCTGCCACTCTGCTTGCAAAGCTTGCATTTGTACCAGGTCAATTCCTCC ACAGTGTCGTTGTTTAGATATCACTAACTTTTGCTATGACCCATGTACCCCTGAAGGTGAAGCTCACTAA
Protein sequence (LotjaGi1g1v0474900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKKKRRVRKMEFNKNGSVNVALLLFLLAFTAAVVADARSFDPNSFIAQVLPKGTDDTSYYVKSTATACCNSCPCTRSIP PQCRCTDIGETCHSACKACICTRSIPPQCRCLDITNFCYDPCTPEGEAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 36 | 36 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 38 | 38 | - | – | |
| Phobius | 1 | 38 | 38 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 36 | 36 | - | – | |
| PANTHER | 14 | 126 | 113 | 8.4E-40 | – | |
| PANTHER | 14 | 126 | 113 | 8.4E-40 | – | |
| TMHMM | 17 | 36 | 20 | - | – | |
| Phobius | 21 | 32 | 12 | - | – | |
| Phobius | 33 | 38 | 6 | - | – | |
| Phobius | 39 | 129 | 91 | - | – | |
| Gene3D | 59 | 128 | 70 | 2.2E-23 | ||
| SUPERFAMILY | 60 | 124 | 65 | 2.22E-20 | ||
| CDD | 69 | 122 | 54 | 6.6943E-15 | ||
| SMART | 69 | 122 | 54 | 4.8E-24 | ||
| Pfam | 69 | 92 | 24 | 3.9E-8 | ||
| ProSitePatterns | 85 | 99 | 15 | - | ||
| Pfam | 95 | 118 | 24 | 9.0E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase inhibitor activity | Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme. | ||
| Cellular component | Extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
Expression pattern of LotjaGi1g1v0474900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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