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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0486100 |
| Transcript ID | LotjaGi1g1v0486100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase-2c, putative; TAIR: AT3G02750.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33; TrEMBL-Plants: tr|I1N3Z6|I1N3Z6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0486100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:99928667..99934048) extracted from Lotus japonicus Gifu genome v1.2.
AATAAACTAATAATGACTGGTTTTTAATACTAGTCTAAAAGGGACTTTCTCTGTTCAACTCTACAAATATTGCTTTGTCT TTCCCTTTCCCTTTCCCCTGCTTTTCTGGGTCTTCGCGATCTTTCTGCTCTCTCCGATTCTTCCTCCATTTCCAACTTGT CCGCTTCAAACACACTCCAAATCTCACGCACCTCTTTCTTCTCTTCCTTCACATTCCCCTCTCCTTCTTGTCCGAACCCA TTTGAGCCATTCTTCTTCCATTCCCAGTTTCTGCTTCAAAGCTTCAAAACCCACATCCCATCCTTAACCTTCGATCCAAA TTTGAAAACTTTCTTTCTGGGTGTTGCGGAAAAACGCAAACGCGCTTTCTGGGGTGCCGTCAAAACAACGATTTCACTTG TTGCTATATGTACTTTTAACTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTGTCTTTGCTGTTTTCACTTTTTTAAT CTGAAAAGTTGGGAAGTGCACTGGATTACGCAGATCTGCACTTTATGGACATGTGTCTTGTAGCTATTACTCCATAATAA TATACAAAGCGTGTGTTGGTGTTTGTGTTTGTGTTTGTGTGTGAGAGAGAGTTTCCAAGTTTTCTTTCTCATCTTATCTC TTTGTTGATTTGATGATTGAAGCTGAGTCAGTCATTGCCATTTTAGCTATCTCAATCTAAAAAGGGCATAATTGTCAGTG GTGGGTGGTCTAGAATTTTCCAAAAAGAGAAGAATTTTGATTGAGGGTGAAGGAGTTGTAGAGAGGAAGATCTTGAAGGG GTTGGAGAATTTTTGTTGTTGTGTTTTCTGTAGATTTTGTTGTGACGGATTCTTCAAGGGAAGAAGGTGGTGGTGGTGGT TGTTCAGCTGGTCTGGAGTGCATTATAGGCATTCTCAGGGCCCTCAAGATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAG CCCTCATCCCAATTCACCTGGGAAGCGGAAGAACTCAAAGAAGAGGCTTGGATCAAGGACCTCTTCCTTTGAGTATTGGA GGAATGAGCCACTTCATAGGATTGCTGACAGGATTTTCCTCAATGGCTCAAGCCAAGTTGCCTCCTTGTTCACCCAACAG GGAAAGAAGGGCACCAACCAAGATGCCATGATTGTTTGGGAGGTTAGATCCTTTTCATCTTTTTATCTTTCCTTTTTCAA CTTCTCATTTCCAAATTTAAGAAATTACCCTTTTATACATTTTTTATTTATTTAACATCTTAACTACTTTGTTCACAATT CAGATCCTATCCTTATCCAAATGTAATGAGATTTATTTTCATGTATTGCCATGTATATGTTTTGTGTATGTCCTAAATTG ATATTTTTGTTGCATTTCCTTATTTCTGCTGATTTGGCTTTGAGGTGTCTTGCTTGATCAATCAGAATGTTACTGTGCTT TCTTTGCAAGTATGGTTTTATGCATGGTAGTGTTAGCCACTGATCCTTAATTCAAAGCATCTTTGACTATTTAAGATTTT GATTACTTGAGTGTGGCATTGGGGATCTAAAATTTTATTCTTGTGTGATCACTTGATGAAGGAAGATGGTTGATTCAAAT CCTGGTGAGGATCTTAGTTGTGCTTCCCTGCCCCTTAATAGGGTTGCATGAATATTAATCTGTTTCCAGCCAACTCATCA GAAAATTTGTTTCATGGCCTTTTCTTTGTCCTTTATTTGTATATCAACTTAGTTTATCTATCTTTCGTGTGTTTGGGTGG AGGGGATGATCTATTGGTAATTCTCTATTTACAATAACAAATGTTGATGCTTGTCATTTGGTTTTTCTGTTGATTATTGT TGAACTGTGTTTTCTCTGCCTCTGTTTATCATACATTGCTGAACTTTTGTTCTACTTCATATTTTATCTATCTGTTGTGT GTTTAGGAGTAGGGGTGAAGCTATTGGTAATTCTTTATCAACAATAACAATTGTTGATGCTTGTCATTTGTTTTTTCTGT TGATTATTGTTGAACTGTGTTTTCTCTGCTTCTGTCTATCATCCATTGCAGAACTTTTGTTCTAGACAAGATACAATTTT CTGTGGAGTTTTTGACGGACATGGTCCATATGGTCACATGGTTGCGAAAAAAGTGAGGGATTCTCTTCCTATGAAACTGA ATGCCCATTGGGAATTTAATGCATCTGGTGAGGAATCCCTCAAGGAGCTTACCATTAATACTGTATTAAGCATGAACTCA GAAGAAACTCCCTCTTTATCTGCTGATGAGGAATCCAGGGTATCCGTTGATGCTGCTGAGGAGACAGAAAAGCACCCGGA AATCTTTCACACACTTAAAGAGTCATTTTTGAAGTCATTCAAAGTTATGGATAGAGAACTGAAGATGCACCAAACTATTG ATTGCTTCTGTAGTGGCACAACAGCTGTCACTCTGGTTAAGCAGGTATTGGGATGCATCCTTTGGAATGTTAGAGATTGT CTAGTATCTAATGTATCTTATTGAAGTTATCTGTAAAGTGAATGATTTCTCGCCGTAATAGATTTTGCTTCCTTGTAGGG TCATGACCTTATAATTGGAAATGTTGGCGACTCTAGAGCGGTGCTGGCTACAAGAGATAGAGATGATTCTCTTGTTGCAG TACAGTTAACTGTGGATCTAAAACCCAATCTCCCTGGTATATCTCTCATCTAAGAAATTCTTGCCTACCTTGTTCAACAA GGAACATCAGATTGTGGTGAACCATGAAGAATATAGTTCAGTAGAAACATGTCCCACTTATGATTAAATTGTCTCTACCT TGACAGGTTTTCCTAGAAATGTCTTTCTCACATAATCTTGTACTGATGTACATGCATACAGACAGTTATGCATTTTCCTG ATGCTATAGAATGAGGTCTATATATGTCTGGAATTTCTCACATGTGCATCGAACACTATACTGAGAGATGATGCATTTCT CACCTTATTCCTCCTGAATCCTGATTCACTTTTGATTGGAAAATTTCCTTCTGTCATATAAAACTGTGAAGTTCCTTTTT GTTTTCTGATTTATTTTACACTATTGGCTATGGGAAATATACCAAACTTCACATCTGTTGAGTTAGATATTGTGGTTGTG TTAGTACTCAAGTCGATCTTATATTGTGCATATTCAGAAGCAACTCAGTTCGTGGTTTCTGTTAAAATAACCAAACTCTT AGGAAAAGACTTAAGCATATATAGAACTTCGTGTTTTGCTGGCTTAGTTCTCTAACCCTATGTTTCATGGTCGGTCATAT GTTTACGTTTTGTTGCCTGGTCCTCCCTTATTTATATTTCTCTTTTACAGCTGAAGCAGAGAGAATTCGCAAATGTAAAG GCCGAGTTTTTGCTCTTCACGATGAACCTGAAGTTGCTAGAGTCTGGTTGCCAAACAATGATTCCCCCGGCCTTGCTATG GCAAGGGCATTTGGAGATTTTTGTCTGAAAGATTTTGGTCTAATCTCTGTCCCTGAGGTATCATACAGACGCCTCACTGA TAAGGATGAGTTTATTGTCTTAGCAACAGATGGGGTAAGATACCTGACCTGTGTTGTAATTGCACTTGCCTATTACGTTT TATTATTCTAATTCTTATGGAAAATGCTCACCAATGCCCTTATAGTAGGAATTTCTTGTCATTATTAATATTATTATTAT TACTTTCATAGCTTTGTTTATAATCATTCATTTCAAGTTTGGTGGTGTTTGTTGATTGCAGATTTGGGATGTGCTTTCAA ACAAAGAAGTGGTAGACATTGTGGCATCCGCGCCGAGGCGTTCCACCGCAGCGCGAGCACTGGTTGAGTCAGCAGTTAGA GCTTGGAGGTACAAGTATCCAACCTCCAAAGTAGATGATTGTGCTGTGGTTTGCCTATTTCTTGACTCAGACATGAACAA AGTATACAGTGCTTCTTCCCATGCCAAGTCCAATGAGCCGGCTAGTTCTGGGATCACCCAAGTCAGTAGCAATGGTGGTG ATGATGACGATGATGTTTCCGGACCTCCTGGTCTAGCAAGGTCAGGAACCTGTAGGGAAGTCAATGGCAATGGTACTACT TCACATGACGATAACAACAACAATGAGGAAGAGTTGAAGGACGAGGAGGAGATAGATGCTGATGCAGAAAAAGAGTGGTC TGCACTTGAAGGAGTATCTCGTGTGAACACTTTGTTAACTCTCCCAAGATTTGTCCCTGACAAAGCAGACAAGGCTGCAG CATCAGAAGGGGTGAGAAAACGCAAATGAAATTGTTCAAGCAAGGAATATTGAGCTAGTGCTTTACCTTTTTTGTTTTTC AAATTTCCATTCTTATATCTTTTTGTTTTCCATTATTGTTATAGATACATACATTACATACATGTACCTTTTTCTTTTAT TTATATGTTAAGTCTATATCCACGATCCAACTCAATGGTTTGGTCTGGAAATCTGTCATTGCTCTCTTGCATGCTTGGAA ATTTTGTAAAATCAAACTCTCCAAACAATACATCAATTTTTGTTTTGATAAAGGGCCTGCTTGTTCTGTTGGTAATTTCA CTAATTTGTAACTTGGTAGTGGCCCTACCTGAAATATGATTGTCTCAATGGATTGATACATGTGGTTTAAGCCAAAAATT TGTAGCGTGGTTCTCGTGTTTGTGTGGCTATTATTAATTTATTGTGATGCTTGTTGGTGAATGGCAATGTTGTGATAAGG ACACACTGTGGGTAGGTTGTAAAAATCAAAGGAAGTGGTTGCTATTTTTCCTTGCTTTTACTTGTTTCTTTTTCTCAAAT CAAGGGAAATGAATGTGGTGCTTTGTGGCCTGATGCCAGCCTAGCTTATATTGTGGTTGGGGCAGGTGACAAGGTGACAG CAATATGCTTGTTGAACATATGTGGTAGGAATTGAAGCACGTACTAAGTTTGTTGATGTTCAAGGTGATGACTATGAAAT GTCACCTTGTATTGGAAGACAGTTTGCATTTATGTTTTTGAGGAGTACAGTTGAACAAAAGTTTACTCATGATTTTTAAG GAAATTACTGAAAACCTTTAATTTTTTTTCTTTCTATTAGTGATCTAATGACATTGGAATTCTTTTCATATTAGATGCAT CTACATTTGTTGAGTGCAACGTGAGCTGAGTTTTTATCAATTTTTATCAATTCATTAGAGTTTCGTTTATTTTTTGTTTT GAAGTGAGTGTTACAATCTATTTGCACTAGTGTGTGACTATGGTGATGAAATCGATTGTGTTTGGTTATCCATAGTCATT CACACACATTTGAAGATAAACAATGAGTGGAAATGTTCTTATAAATTGGGTGGATTGGTATTCAGATTCGCACATTATGT GTAACTACATATATGTGTGTGT
CDS sequence (LotjaGi1g1v0486100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCATCCCAATTCACCTGGGAAGCGGAAGAACTCAAAGAAGAGGCT TGGATCAAGGACCTCTTCCTTTGAGTATTGGAGGAATGAGCCACTTCATAGGATTGCTGACAGGATTTTCCTCAATGGCT CAAGCCAAGTTGCCTCCTTGTTCACCCAACAGGGAAAGAAGGGCACCAACCAAGATGCCATGATTGTTTGGGAGAACTTT TGTTCTAGACAAGATACAATTTTCTGTGGAGTTTTTGACGGACATGGTCCATATGGTCACATGGTTGCGAAAAAAGTGAG GGATTCTCTTCCTATGAAACTGAATGCCCATTGGGAATTTAATGCATCTGGTGAGGAATCCCTCAAGGAGCTTACCATTA ATACTGTATTAAGCATGAACTCAGAAGAAACTCCCTCTTTATCTGCTGATGAGGAATCCAGGGTATCCGTTGATGCTGCT GAGGAGACAGAAAAGCACCCGGAAATCTTTCACACACTTAAAGAGTCATTTTTGAAGTCATTCAAAGTTATGGATAGAGA ACTGAAGATGCACCAAACTATTGATTGCTTCTGTAGTGGCACAACAGCTGTCACTCTGGTTAAGCAGGGTCATGACCTTA TAATTGGAAATGTTGGCGACTCTAGAGCGGTGCTGGCTACAAGAGATAGAGATGATTCTCTTGTTGCAGTACAGTTAACT GTGGATCTAAAACCCAATCTCCCTGCTGAAGCAGAGAGAATTCGCAAATGTAAAGGCCGAGTTTTTGCTCTTCACGATGA ACCTGAAGTTGCTAGAGTCTGGTTGCCAAACAATGATTCCCCCGGCCTTGCTATGGCAAGGGCATTTGGAGATTTTTGTC TGAAAGATTTTGGTCTAATCTCTGTCCCTGAGGTATCATACAGACGCCTCACTGATAAGGATGAGTTTATTGTCTTAGCA ACAGATGGGATTTGGGATGTGCTTTCAAACAAAGAAGTGGTAGACATTGTGGCATCCGCGCCGAGGCGTTCCACCGCAGC GCGAGCACTGGTTGAGTCAGCAGTTAGAGCTTGGAGGTACAAGTATCCAACCTCCAAAGTAGATGATTGTGCTGTGGTTT GCCTATTTCTTGACTCAGACATGAACAAAGTATACAGTGCTTCTTCCCATGCCAAGTCCAATGAGCCGGCTAGTTCTGGG ATCACCCAAGTCAGTAGCAATGGTGGTGATGATGACGATGATGTTTCCGGACCTCCTGGTCTAGCAAGGTCAGGAACCTG TAGGGAAGTCAATGGCAATGGTACTACTTCACATGACGATAACAACAACAATGAGGAAGAGTTGAAGGACGAGGAGGAGA TAGATGCTGATGCAGAAAAAGAGTGGTCTGCACTTGAAGGAGTATCTCGTGTGAACACTTTGTTAACTCTCCCAAGATTT GTCCCTGACAAAGCAGACAAGGCTGCAGCATCAGAAGGGGTGAGAAAACGCAAATGA
Protein sequence (LotjaGi1g1v0486100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSCFSAESRSPHPNSPGKRKNSKKRLGSRTSSFEYWRNEPLHRIADRIFLNGSSQVASLFTQQGKKGTNQDAMIVWENF CSRQDTIFCGVFDGHGPYGHMVAKKVRDSLPMKLNAHWEFNASGEESLKELTINTVLSMNSEETPSLSADEESRVSVDAA EETEKHPEIFHTLKESFLKSFKVMDRELKMHQTIDCFCSGTTAVTLVKQGHDLIIGNVGDSRAVLATRDRDDSLVAVQLT VDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTDKDEFIVLA TDGIWDVLSNKEVVDIVASAPRRSTAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSDMNKVYSASSHAKSNEPASSG ITQVSSNGGDDDDDVSGPPGLARSGTCREVNGNGTTSHDDNNNNEEELKDEEEIDADAEKEWSALEGVSRVNTLLTLPRF VPDKADKAAASEGVRKRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 30 | 30 | - | – | |
| PANTHER | 18 | 424 | 407 | 1.2E-183 | – | |
| PANTHER | 18 | 424 | 407 | 1.2E-183 | ||
| SMART | 48 | 375 | 328 | 6.8E-69 | ||
| Gene3D | 51 | 379 | 329 | 1.9E-80 | ||
| SUPERFAMILY | 51 | 378 | 328 | 2.75E-61 | ||
| CDD | 56 | 377 | 322 | 9.5219E-73 | ||
| ProSiteProfiles | 57 | 377 | 321 | 48.277 | ||
| Pfam | 69 | 356 | 288 | 8.6E-42 | ||
| MobiDBLite | 389 | 410 | 22 | - | – | |
| MobiDBLite | 389 | 457 | 69 | - | – | |
| Coils | 441 | 461 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi1g1v0486100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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