Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0489800 |
| Transcript ID | LotjaGi1g1v0489800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT4G37850.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9T072|BH025_ARATH Transcription factor bHLH25; TrEMBL-Plants: tr|A0A0B2QPQ5|A0A0B2QPQ5_GLYSO Transcription factor bHLH25; Found in the gene: LotjaGi1g1v0489800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100313382..100319300) extracted from Lotus japonicus Gifu genome v1.2.
CACCACTGAATAAGACCACGTGGGAAAAAATTGCATTTTGCTATTTAAGAGGCAGCTCCTACTTTTGATCAACGAGGCTA ATGCACAAGGTCCACTTCAGAAGTTCTCTTTCTTTAGTGTGCAAAAATGGCCCATTTATTGGAGAATTTGGTTTCTCATA TGGTAAAAGCAATTTATACTATATATAAATATCAAAGTGCGCGCATGATTTGACTATATATATTTATGATTAAACCATGT AATGCCTGTTTTGTTTTTCCTCTCTGGTCTGTCCAATTGTCACAGGAAATGGATGATGATATCTTCAATCAAAGTGATAA CTCATTTGATGAGCAAGGGTTCCTCAGAGAGATCCTTCAGTTACCAGATTTCTCACCTCAAAGTGATGAAACCTCCTCCC CTTGTCCTTATTTCAAAATCCAAAACAACATTTCTGTAGATGGTGTCACCAGCCCACCCAATAGTATAAGCACTCTGTCC CTTGAGGAGACAGGTTTTGAAAGGAATGACCCTCTTCACAAGAGTCACAGCTCCAACTCTATCATGTCTTTGGAAAATAA TCTCAATTCTCCAACCACATACCTTTTATCTTTTGACAAGTCCAGTGTTGAACAAATCACTCATGAATCTTCCCCAGATC ATAACTCTGTATTGAGATCCAATAACAGGACTAGAGGATCTGAATTAACACCAGGGATGCACCAAGCAACTAAGAAGGTG AGAAGGTCAGGAACACCACATCACATAATGGCAGAGAGAAAACGAAGAAAGGAGTTGACACAGAACATCATAGCACTTTC AGCAACAATACCTGGATTGAAGAAGGTCAGTTCTTTATACCTTACTTTACTTTTAAAGTTCTTTTCGACATATAACATAA AAGAAAGGAGTTGTCCAAATGACCCATAATAAGGCATATATATACTAATTAATCTATTTTTTTTTTAAGGACAAAACTTA TGCACGGTTGTAAATACATGTTTTTATTGTTGTTCACTTACCGTATGGTATGCGGATTAAAAAATGAGGAGTGTTATCAC ATGAATATAAAATTAATATTAAGGAAGTGAATGTCTGAATTTTTCGTTGTACGATATCATCTAGAAACATTACATATATA AAATAATATTGTAGGTAAGTTTTGTCCTATTATTAGACCCAACTTTCCTAGCTAGTGAAAATGTTATTGTAATAATATAA ACATAATAGCATCTCCAATGCATAGTTGCTAGTTGGGTTGCTTAAAAATTATGTCGGTGGGTCCAGACTGACACATAGGA TTTAAGCAACTCAAGCAAAATTCGCTCCAACCACGGTTGCTTAGTTTACTTTTAGTTGGGTCCCATTATACCTCTTATAT ATATATATATATTATTTCAAGGTAATGACACTATACAAGTACATGAATGAAAGAGAAAATATGATTTTTTAGTCAAAAAG TAAGGAGAGAGAAAATAAGCAACTGTTGCTTAAATTTAAGCAACCCAACTGCCACGTCATGTTGCTCCAGTAGTGCTTCA AAATAAGCAACGTTGCTTAAGTTGCCAACTGGATTTAAGCAACCCCATTGGAGATGCTCTAATAAGGTTAGTTAAAAGTA GTAAAATTTTAGGTCCACCTAATATGCACCACTTTTTAGTGGTGTAACCTTGCACCACTATGTTAATTGTCTATTTTACT CCTGTTCAAAAAATTAATCCCATCAAAATCCACCCAGTAATACCAATATTTTTTTCTTTTATAAAATAATTTTTTTAGCA TGGGTAAAATGGAGAATTGGTATAGTGGTGCATATTAGGTGGCACCTATTATTTTATCCAATTTTAAATTTTATCAACTA AACTTTCATAGACTTTAGAGAATTATTGTATTGTTTTGGCCGGTAGAAAAATAAGTGTTGCTTCGGTATTCTTATAAAAA AAAAGGACGCAGTACCTTTTATTATAATTTTAAAATATTTAGGAGTAGATTACAAAATATTATAAATTTAATTTGGAGAT AATATAACATATATACCAACTTAAAAATATATGGAACTTCTCAATTTTTAAGAGCATGAGAGAAATACCAATAATAACTT TTAGGTTAGATGTGACACAAAATAATAAAATGTCAGTGAAAAGTAATTTTACATTGAAAGTGCATGAAAATAAAACTCTT TCAAAGAATTTAATGTATATGACCTTATCACGTAAAATAGTTTGAGTTTAATTATTATTCACTGATAAGATAAAAAAGTT TTACACAGTCTTTAAATTAAAATTCACCATTATAAAAACTCCAATTCCATGCTCATCAAATTGAATTTAAAAACAATTAA TGAAAAATGGTGTAAAATGATTGAATGGGCACCTAAAACTATTTACACTTTAGTGCATATAAATAAAATTGAAAAATTTG TACATAAATATTTAATTATTATTTGCCATGTCAAAAGTAAACTTTAAATTTAACATTTAAATTCATAGCTTTCAGATTTA TGTGTCATGAAATAATTGAACGTCAATGTAAATAATTTTTTACGAACAACACATGAAAATTTAACTCTTTTAACAATTAT TTAATGTATATGTAATGTCGTTGTAAAAGAATTTTATATTATTATTCATTCTCACATCAAGAAAATTAATTTTAAATTTA TATGTTTGTAAATTAGATAAAATGTCAAAATTTATGCATTCCATTCTTGAATAAGACAAAAGTCCAAAGAAATAAAACTA AAATACTTTCTATCAGTCACAATCGAATAATTTATTATTGGTAATCATTCAAACATGACACAAGAAAACTGTTTAATGTC AACACCGGAAAACTTTTCATAAAGCTTTTCATGGCCTACTTCTTTATTTATGGGAGCCAGCATTCAATTTTTGACAGTAG TGAAAATATCTAATGTCTCTCCAATGATTGCAATTCGTAAAAATTGAATTTTCATTTAAACAATCACTTTTAATCACTGT ATATAAAGAGTAGCATTAAAATTTCCGAAATTAAAATAAAACATGAAAAACATTATTATCTTTTATCAAATATTTTAATT ATATTTATTAATACCTGTGTAGCCAAGGGTAGCTAATTAATAGCTAACTATCACCTAAGATAAAAAAAAAAAACCTAATT TTTATTTTAAATACTTTCTCCGTTCCAGAAAGTTTGTAGTATAAGGTTGTGGCACAAAGAGTAAGAAAGCAATTATTGAT AGTATAATTTGACTAGATTGTCCTTATTTAATTTTACTAGTATGATGTGCAAATATTAAATTATACTTAGAGCATCTACA TCCATCATACTCACTAAAATATCTACACTTCATTTTTTACAATTCCCCATAAGCCACATCATCTACAACATTTTACTAAC TTTTTACTTCAACCCAACAACTCTTAAAAGTTTTTATAGTGGATCCCACCATCAACTTTACATTTATATATTTTACTCCC TCCGGTCCTATTTATAAGCAGCAAAAAAAAAATTCACATAGTTTAAGAAATGTAGTTAAACTAGATAAAATGCATTAAAT TTGTCTTGAATCAAAATAAACTTCCAAAATTACCCTTTGTTATTAGTATTGGAAAGTGGGAAAGAGAGAGAATAATTAAT GAGACACATTTTACAAGTTAGAATTAATAAGGGCATCATTGGAAAAAAATAATTAATATAGCTCAAACTTTCATTTGGTT CTTATAAAAAGGACCAAGATTTTTCTTCTCTTTCATGCTTATAAATAGGACCGGAGGGAGTATTATTTATATCCATTTTA ATTAATTATATTTGCAACTTAAATATGATGGAGGTAAATGCTCTTAATGGTAAGTGCTTGTAATAAATACAAGCTCACTT TTCAAGTCTAGTGTGGAGTATCTATTCCCACATACTCATCTTTGCCATGTTGGAATTGAATATGTACTCCAATGGTAATA GATACTCATATGAGTATGTATTTAACATTAGATACTACCATTGGAGATGCTCTTAAATAGAGAAGAATGTAATTAATAAA GAAGAGTTGTGGTTGGTTAATATGAAAGGTGATAAGTGAGAGAAAATGTATTAAATGAGAGTATAGGTGGAAGAAATTAA CAAAAAATGCATTGGTTTTCTAAAACAACAAATATTTTGAGATATTGAAAAATGGTGCAAAACAATAAACTTTATGGAAG GGTGGGAGTATAACTTATAACTGAAAATTATAAAGTGTAAATAGTTTCTTACATAACTCTTTTATAACTACAGACAGACA AGGTTTATGTTCTTCGTGAAGCCATCAATTACACAAAACAACTTCAGGAGCGCGTTAAAGAGTTGGAGAATCAAAACAGA GATAAAAATGTAGATTCAGCAACATTCACCATGAAATCTCAAGATTCCTCAAATAAAAGCACCACCTATTGTGAAACAAA CAGAGAATCACTGCCAATTGGTGTCAAAGCAAGAGTCCTAGAGAAGGAAGTGAATGTTGGAATCCATTGTGAGAAGCAAA AAGACATAGTGCACAATATTTATGTCTTGCTTGAAAAGATCCATCTCTCTGTGACATGTAGTAGCGTGTTACCATTTGGG ACTTCTCTCATAATTAACATTATTGCTCAGGTATGCTATGACTTTCTTCAATGATCCAATAATTAAGGCCCCGTTTGGAA ACACAGCTTAATTAAGCACTTATGGACATAAGCGCTTATGTCATAAGCGCTTATTCATAAGCTATTTTAAAATATTTATT GAAATAAATTGAAAATAAGCTATATATAAGCATAAGCTCTTTTTCATAAGCTGTTCTCAATAGCTTATGAAAATAAGCTC AAAACAGCTTATGGTAGGCCATAAGTTATTTGCATAAGCTCTCCCAAACAATGACATAAGAGCTTATACTATCAGATAAG CTCAAATAAGCTCTTCCAAACGGGGCATAAATATCAAACATGCGTTTTTATTCCGCAATCATTTTTTAAAGTCAAAATTG TGGGGCCCAAAAGTTAAAAGAAATTGATATTCCGCAATCATTTTTTATCGTCTTTATTTATTATTGTGTATTCAAACATG CGTTTTTATTTCATTTCAAAGTACACTATTTTATAAGAGATTGTTCAAAGTATGTTATGTTATAATGTGAAACATTTATA CTTTTTTGGGTCGATATGGTAATCGAAATTCTAAATTGTATAGCTATGATGCAGATGGATGATGAATACAACATGAGCAT TGATGAGCTAGTGAAAAACCTGAAAGAATATATGTTGGAGGCATGCGGCGTGCAATAGTAACTCATTCTATACATTCAAG AAGTTCTCTCCAATTCTAGTTTATGATGATCTCGTGAAGGAGTTTGGGAAAAGCTGTTGTCCTTTGGTGATGACTTGGTT TGTGTTCTTGTTTGTCTCGTGAAAAGGGGAGGAATTGAAAAAGCAAATGCTATATATATAAGAAATGGTCCAAGTTTATG TGCATATTCTTTTTTTAGGTATAATAATGAGAGGGAGTTTGGGATCAAGTTCAACTTTTCTCAAAATGATGTTTTATTTC TCCTGTTTATCAATGAGATTATGTCACATGAATTAAAACTAACTTTGCGAAGTGTGGGGTTCAAATTCTGGTCACTTCAT TTCATGTCATGTTGCTCTCTCTGCTAACGGACCATGTGTTTACTTTACACCTGTTTGTATACAGATGATATATAGAGTTA TGATATTTTCACCCTTCTTTCTCTTGCAATTTAATTCCATTCGGTTTTTCTTTTTATCTCTTTCCTACATTCTATCACAT CATTTATCATATTTTTCTGTCATTTATTTTACTTTCTTTTCTTCTTAAAATTCAAGAGATGTAGGAGTGGAAGGGTGTGT ACCCAACATTTTCCTATAATATATAAGTAATAAGTGTGTTACATTTTTTCCAAATCTTTATATTGCATATTCTCCAATT
CDS sequence (LotjaGi1g1v0489800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTAAACCATGTAATGCCTGTTTTGTTTTTCCTCTCTGGTCTGTCCAATTGTCACAGGAAATGGATGATGATATCTT CAATCAAAGTGATAACTCATTTGATGAGCAAGGGTTCCTCAGAGAGATCCTTCAGTTACCAGATTTCTCACCTCAAAGTG ATGAAACCTCCTCCCCTTGTCCTTATTTCAAAATCCAAAACAACATTTCTGTAGATGGTGTCACCAGCCCACCCAATAGT ATAAGCACTCTGTCCCTTGAGGAGACAGGTTTTGAAAGGAATGACCCTCTTCACAAGAGTCACAGCTCCAACTCTATCAT GTCTTTGGAAAATAATCTCAATTCTCCAACCACATACCTTTTATCTTTTGACAAGTCCAGTGTTGAACAAATCACTCATG AATCTTCCCCAGATCATAACTCTGTATTGAGATCCAATAACAGGACTAGAGGATCTGAATTAACACCAGGGATGCACCAA GCAACTAAGAAGGTGAGAAGGTCAGGAACACCACATCACATAATGGCAGAGAGAAAACGAAGAAAGGAGTTGACACAGAA CATCATAGCACTTTCAGCAACAATACCTGGATTGAAGAAGACAGACAAGGTTTATGTTCTTCGTGAAGCCATCAATTACA CAAAACAACTTCAGGAGCGCGTTAAAGAGTTGGAGAATCAAAACAGAGATAAAAATGTAGATTCAGCAACATTCACCATG AAATCTCAAGATTCCTCAAATAAAAGCACCACCTATTGTGAAACAAACAGAGAATCACTGCCAATTGGTGTCAAAGCAAG AGTCCTAGAGAAGGAAGTGAATGTTGGAATCCATTGTGAGAAGCAAAAAGACATAGTGCACAATATTTATGTCTTGCTTG AAAAGATCCATCTCTCTGTGACATGTAGTAGCGTGTTACCATTTGGGACTTCTCTCATAATTAACATTATTGCTCAGATG GATGATGAATACAACATGAGCATTGATGAGCTAGTGAAAAACCTGAAAGAATATATGTTGGAGGCATGCGGCGTGCAATA G
Protein sequence (LotjaGi1g1v0489800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIKPCNACFVFPLWSVQLSQEMDDDIFNQSDNSFDEQGFLREILQLPDFSPQSDETSSPCPYFKIQNNISVDGVTSPPNS ISTLSLEETGFERNDPLHKSHSSNSIMSLENNLNSPTTYLLSFDKSSVEQITHESSPDHNSVLRSNNRTRGSELTPGMHQ ATKKVRRSGTPHHIMAERKRRKELTQNIIALSATIPGLKKTDKVYVLREAINYTKQLQERVKELENQNRDKNVDSATFTM KSQDSSNKSTTYCETNRESLPIGVKARVLEKEVNVGIHCEKQKDIVHNIYVLLEKIHLSVTCSSVLPFGTSLIINIIAQM DDEYNMSIDELVKNLKEYMLEACGVQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 21 | 340 | 320 | 1.6E-105 | – | |
| PANTHER | 21 | 340 | 320 | 1.6E-105 | – | |
| MobiDBLite | 132 | 156 | 25 | - | – | |
| MobiDBLite | 132 | 171 | 40 | - | – | |
| Gene3D | 158 | 232 | 75 | 1.3E-13 | ||
| CDD | 163 | 222 | 60 | 1.95047E-8 | ||
| ProSiteProfiles | 168 | 217 | 50 | 13.236 | ||
| SUPERFAMILY | 172 | 232 | 61 | 3.27E-14 | ||
| Pfam | 173 | 218 | 46 | 7.0E-7 | ||
| SMART | 174 | 223 | 50 | 1.4E-8 | ||
| Coils | 207 | 234 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi1g1v0489800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…