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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0489800 |
| Transcript ID | LotjaGi1g1v0489800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT4G37850.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9T072|BH025_ARATH Transcription factor bHLH25; TrEMBL-Plants: tr|A0A0B2QPQ5|A0A0B2QPQ5_GLYSO Transcription factor bHLH25; Found in the gene: LotjaGi1g1v0489800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100313382..100319300) extracted from Lotus japonicus Gifu genome v1.2.
CACCACTGAATAAGACCACGTGGGAAAAAATTGCATTTTGCTATTTAAGAGGCAGCTCCTACTTTTGATCAACGAGGCTA ATGCACAAGGTCCACTTCAGAAGTTCTCTTTCTTTAGTGTGCAAAAATGGCCCATTTATTGGAGAATTTGGTTTCTCATA TGGTAAAAGCAATTTATACTATATATAAATATCAAAGTGCGCGCATGATTTGACTATATATATTTATGATTAAACCATGT AATGCCTGTTTTGTTTTTCCTCTCTGGTCTGTCCAATTGTCACAGGAAATGGATGATGATATCTTCAATCAAAGTGATAA CTCATTTGATGAGCAAGGGTTCCTCAGAGAGATCCTTCAGTTACCAGATTTCTCACCTCAAAGTGATGAAACCTCCTCCC CTTGTCCTTATTTCAAAATCCAAAACAACATTTCTGTAGATGGTGTCACCAGCCCACCCAATAGTATAAGCACTCTGTCC CTTGAGGAGACAGGTTTTGAAAGGAATGACCCTCTTCACAAGAGTCACAGCTCCAACTCTATCATGTCTTTGGAAAATAA TCTCAATTCTCCAACCACATACCTTTTATCTTTTGACAAGTCCAGTGTTGAACAAATCACTCATGAATCTTCCCCAGATC ATAACTCTGTATTGAGATCCAATAACAGGACTAGAGGATCTGAATTAACACCAGGGATGCACCAAGCAACTAAGAAGGTG AGAAGGTCAGGAACACCACATCACATAATGGCAGAGAGAAAACGAAGAAAGGAGTTGACACAGAACATCATAGCACTTTC AGCAACAATACCTGGATTGAAGAAGGTCAGTTCTTTATACCTTACTTTACTTTTAAAGTTCTTTTCGACATATAACATAA AAGAAAGGAGTTGTCCAAATGACCCATAATAAGGCATATATATACTAATTAATCTATTTTTTTTTTAAGGACAAAACTTA TGCACGGTTGTAAATACATGTTTTTATTGTTGTTCACTTACCGTATGGTATGCGGATTAAAAAATGAGGAGTGTTATCAC ATGAATATAAAATTAATATTAAGGAAGTGAATGTCTGAATTTTTCGTTGTACGATATCATCTAGAAACATTACATATATA AAATAATATTGTAGGTAAGTTTTGTCCTATTATTAGACCCAACTTTCCTAGCTAGTGAAAATGTTATTGTAATAATATAA ACATAATAGCATCTCCAATGCATAGTTGCTAGTTGGGTTGCTTAAAAATTATGTCGGTGGGTCCAGACTGACACATAGGA TTTAAGCAACTCAAGCAAAATTCGCTCCAACCACGGTTGCTTAGTTTACTTTTAGTTGGGTCCCATTATACCTCTTATAT ATATATATATATTATTTCAAGGTAATGACACTATACAAGTACATGAATGAAAGAGAAAATATGATTTTTTAGTCAAAAAG TAAGGAGAGAGAAAATAAGCAACTGTTGCTTAAATTTAAGCAACCCAACTGCCACGTCATGTTGCTCCAGTAGTGCTTCA AAATAAGCAACGTTGCTTAAGTTGCCAACTGGATTTAAGCAACCCCATTGGAGATGCTCTAATAAGGTTAGTTAAAAGTA GTAAAATTTTAGGTCCACCTAATATGCACCACTTTTTAGTGGTGTAACCTTGCACCACTATGTTAATTGTCTATTTTACT CCTGTTCAAAAAATTAATCCCATCAAAATCCACCCAGTAATACCAATATTTTTTTCTTTTATAAAATAATTTTTTTAGCA TGGGTAAAATGGAGAATTGGTATAGTGGTGCATATTAGGTGGCACCTATTATTTTATCCAATTTTAAATTTTATCAACTA AACTTTCATAGACTTTAGAGAATTATTGTATTGTTTTGGCCGGTAGAAAAATAAGTGTTGCTTCGGTATTCTTATAAAAA AAAAGGACGCAGTACCTTTTATTATAATTTTAAAATATTTAGGAGTAGATTACAAAATATTATAAATTTAATTTGGAGAT AATATAACATATATACCAACTTAAAAATATATGGAACTTCTCAATTTTTAAGAGCATGAGAGAAATACCAATAATAACTT TTAGGTTAGATGTGACACAAAATAATAAAATGTCAGTGAAAAGTAATTTTACATTGAAAGTGCATGAAAATAAAACTCTT TCAAAGAATTTAATGTATATGACCTTATCACGTAAAATAGTTTGAGTTTAATTATTATTCACTGATAAGATAAAAAAGTT TTACACAGTCTTTAAATTAAAATTCACCATTATAAAAACTCCAATTCCATGCTCATCAAATTGAATTTAAAAACAATTAA TGAAAAATGGTGTAAAATGATTGAATGGGCACCTAAAACTATTTACACTTTAGTGCATATAAATAAAATTGAAAAATTTG TACATAAATATTTAATTATTATTTGCCATGTCAAAAGTAAACTTTAAATTTAACATTTAAATTCATAGCTTTCAGATTTA TGTGTCATGAAATAATTGAACGTCAATGTAAATAATTTTTTACGAACAACACATGAAAATTTAACTCTTTTAACAATTAT TTAATGTATATGTAATGTCGTTGTAAAAGAATTTTATATTATTATTCATTCTCACATCAAGAAAATTAATTTTAAATTTA TATGTTTGTAAATTAGATAAAATGTCAAAATTTATGCATTCCATTCTTGAATAAGACAAAAGTCCAAAGAAATAAAACTA AAATACTTTCTATCAGTCACAATCGAATAATTTATTATTGGTAATCATTCAAACATGACACAAGAAAACTGTTTAATGTC AACACCGGAAAACTTTTCATAAAGCTTTTCATGGCCTACTTCTTTATTTATGGGAGCCAGCATTCAATTTTTGACAGTAG TGAAAATATCTAATGTCTCTCCAATGATTGCAATTCGTAAAAATTGAATTTTCATTTAAACAATCACTTTTAATCACTGT ATATAAAGAGTAGCATTAAAATTTCCGAAATTAAAATAAAACATGAAAAACATTATTATCTTTTATCAAATATTTTAATT ATATTTATTAATACCTGTGTAGCCAAGGGTAGCTAATTAATAGCTAACTATCACCTAAGATAAAAAAAAAAAACCTAATT TTTATTTTAAATACTTTCTCCGTTCCAGAAAGTTTGTAGTATAAGGTTGTGGCACAAAGAGTAAGAAAGCAATTATTGAT AGTATAATTTGACTAGATTGTCCTTATTTAATTTTACTAGTATGATGTGCAAATATTAAATTATACTTAGAGCATCTACA TCCATCATACTCACTAAAATATCTACACTTCATTTTTTACAATTCCCCATAAGCCACATCATCTACAACATTTTACTAAC TTTTTACTTCAACCCAACAACTCTTAAAAGTTTTTATAGTGGATCCCACCATCAACTTTACATTTATATATTTTACTCCC TCCGGTCCTATTTATAAGCAGCAAAAAAAAAATTCACATAGTTTAAGAAATGTAGTTAAACTAGATAAAATGCATTAAAT TTGTCTTGAATCAAAATAAACTTCCAAAATTACCCTTTGTTATTAGTATTGGAAAGTGGGAAAGAGAGAGAATAATTAAT GAGACACATTTTACAAGTTAGAATTAATAAGGGCATCATTGGAAAAAAATAATTAATATAGCTCAAACTTTCATTTGGTT CTTATAAAAAGGACCAAGATTTTTCTTCTCTTTCATGCTTATAAATAGGACCGGAGGGAGTATTATTTATATCCATTTTA ATTAATTATATTTGCAACTTAAATATGATGGAGGTAAATGCTCTTAATGGTAAGTGCTTGTAATAAATACAAGCTCACTT TTCAAGTCTAGTGTGGAGTATCTATTCCCACATACTCATCTTTGCCATGTTGGAATTGAATATGTACTCCAATGGTAATA GATACTCATATGAGTATGTATTTAACATTAGATACTACCATTGGAGATGCTCTTAAATAGAGAAGAATGTAATTAATAAA GAAGAGTTGTGGTTGGTTAATATGAAAGGTGATAAGTGAGAGAAAATGTATTAAATGAGAGTATAGGTGGAAGAAATTAA CAAAAAATGCATTGGTTTTCTAAAACAACAAATATTTTGAGATATTGAAAAATGGTGCAAAACAATAAACTTTATGGAAG GGTGGGAGTATAACTTATAACTGAAAATTATAAAGTGTAAATAGTTTCTTACATAACTCTTTTATAACTACAGACAGACA AGGTTTATGTTCTTCGTGAAGCCATCAATTACACAAAACAACTTCAGGAGCGCGTTAAAGAGTTGGAGAATCAAAACAGA GATAAAAATGTAGATTCAGCAACATTCACCATGAAATCTCAAGATTCCTCAAATAAAAGCACCACCTATTGTGAAACAAA CAGAGAATCACTGCCAATTGGTGTCAAAGCAAGAGTCCTAGAGAAGGAAGTGAATGTTGGAATCCATTGTGAGAAGCAAA AAGACATAGTGCACAATATTTATGTCTTGCTTGAAAAGATCCATCTCTCTGTGACATGTAGTAGCGTGTTACCATTTGGG ACTTCTCTCATAATTAACATTATTGCTCAGGTATGCTATGACTTTCTTCAATGATCCAATAATTAAGGCCCCGTTTGGAA ACACAGCTTAATTAAGCACTTATGGACATAAGCGCTTATGTCATAAGCGCTTATTCATAAGCTATTTTAAAATATTTATT GAAATAAATTGAAAATAAGCTATATATAAGCATAAGCTCTTTTTCATAAGCTGTTCTCAATAGCTTATGAAAATAAGCTC AAAACAGCTTATGGTAGGCCATAAGTTATTTGCATAAGCTCTCCCAAACAATGACATAAGAGCTTATACTATCAGATAAG CTCAAATAAGCTCTTCCAAACGGGGCATAAATATCAAACATGCGTTTTTATTCCGCAATCATTTTTTAAAGTCAAAATTG TGGGGCCCAAAAGTTAAAAGAAATTGATATTCCGCAATCATTTTTTATCGTCTTTATTTATTATTGTGTATTCAAACATG CGTTTTTATTTCATTTCAAAGTACACTATTTTATAAGAGATTGTTCAAAGTATGTTATGTTATAATGTGAAACATTTATA CTTTTTTGGGTCGATATGGTAATCGAAATTCTAAATTGTATAGCTATGATGCAGATGGATGATGAATACAACATGAGCAT TGATGAGCTAGTGAAAAACCTGAAAGAATATATGTTGGAGGCATGCGGCGTGCAATAGTAACTCATTCTATACATTCAAG AAGTTCTCTCCAATTCTAGTTTATGATGATCTCGTGAAGGAGTTTGGGAAAAGCTGTTGTCCTTTGGTGATGACTTGGTT TGTGTTCTTGTTTGTCTCGTGAAAAGGGGAGGAATTGAAAAAGCAAATGCTATATATATAAGAAATGGTCCAAGTTTATG TGCATATTCTTTTTTTAGGTATAATAATGAGAGGGAGTTTGGGATCAAGTTCAACTTTTCTCAAAATGATGTTTTATTTC TCCTGTTTATCAATGAGATTATGTCACATGAATTAAAACTAACTTTGCGAAGTGTGGGGTTCAAATTCTGGTCACTTCAT TTCATGTCATGTTGCTCTCTCTGCTAACGGACCATGTGTTTACTTTACACCTGTTTGTATACAGATGATATATAGAGTTA TGATATTTTCACCCTTCTTTCTCTTGCAATTTAATTCCATTCGGTTTTTCTTTTTATCTCTTTCCTACATTCTATCACAT CATTTATCATATTTTTCTGTCATTTATTTTACTTTCTTTTCTTCTTAAAATTCAAGAGATGTAGGAGTGGAAGGGTGTGT ACCCAACATTTTCCTATAATATATAAGTAATAAGTGTGTTACATTTTTTCCAAATCTTTATATTGCATATTCTCCAATT
CDS sequence (LotjaGi1g1v0489800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCCATTTATTGGAGAATTTGGTTTCTCATATGGAAATGGATGATGATATCTTCAATCAAAGTGATAACTCATTTGA TGAGCAAGGGTTCCTCAGAGAGATCCTTCAGTTACCAGATTTCTCACCTCAAAGTGATGAAACCTCCTCCCCTTGTCCTT ATTTCAAAATCCAAAACAACATTTCTGTAGATGGTGTCACCAGCCCACCCAATAGTATAAGCACTCTGTCCCTTGAGGAG ACAGGTTTTGAAAGGAATGACCCTCTTCACAAGAGTCACAGCTCCAACTCTATCATGTCTTTGGAAAATAATCTCAATTC TCCAACCACATACCTTTTATCTTTTGACAAGTCCAGTGTTGAACAAATCACTCATGAATCTTCCCCAGATCATAACTCTG TATTGAGATCCAATAACAGGACTAGAGGATCTGAATTAACACCAGGGATGCACCAAGCAACTAAGAAGGTGAGAAGGTCA GGAACACCACATCACATAATGGCAGAGAGAAAACGAAGAAAGGAGTTGACACAGAACATCATAGCACTTTCAGCAACAAT ACCTGGATTGAAGAAGACAGACAAGGTTTATGTTCTTCGTGAAGCCATCAATTACACAAAACAACTTCAGGAGCGCGTTA AAGAGTTGGAGAATCAAAACAGAGATAAAAATGTAGATTCAGCAACATTCACCATGAAATCTCAAGATTCCTCAAATAAA AGCACCACCTATTGTGAAACAAACAGAGAATCACTGCCAATTGGTGTCAAAGCAAGAGTCCTAGAGAAGGAAGTGAATGT TGGAATCCATTGTGAGAAGCAAAAAGACATAGTGCACAATATTTATGTCTTGCTTGAAAAGATCCATCTCTCTGTGACAT GTAGTAGCGTGTTACCATTTGGGACTTCTCTCATAATTAACATTATTGCTCAGATGGATGATGAATACAACATGAGCATT GATGAGCTAGTGAAAAACCTGAAAGAATATATGTTGGAGGCATGCGGCGTGCAATAG
Protein sequence (LotjaGi1g1v0489800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAHLLENLVSHMEMDDDIFNQSDNSFDEQGFLREILQLPDFSPQSDETSSPCPYFKIQNNISVDGVTSPPNSISTLSLEE TGFERNDPLHKSHSSNSIMSLENNLNSPTTYLLSFDKSSVEQITHESSPDHNSVLRSNNRTRGSELTPGMHQATKKVRRS GTPHHIMAERKRRKELTQNIIALSATIPGLKKTDKVYVLREAINYTKQLQERVKELENQNRDKNVDSATFTMKSQDSSNK STTYCETNRESLPIGVKARVLEKEVNVGIHCEKQKDIVHNIYVLLEKIHLSVTCSSVLPFGTSLIINIIAQMDDEYNMSI DELVKNLKEYMLEACGVQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 332 | 332 | 7.5E-110 | – | |
| PANTHER | 1 | 332 | 332 | 7.5E-110 | – | |
| MobiDBLite | 124 | 148 | 25 | - | – | |
| MobiDBLite | 124 | 163 | 40 | - | – | |
| Gene3D | 150 | 224 | 75 | 1.2E-13 | ||
| CDD | 155 | 214 | 60 | 4.16806E-8 | ||
| ProSiteProfiles | 160 | 209 | 50 | 13.236 | ||
| SUPERFAMILY | 164 | 224 | 61 | 3.14E-14 | ||
| Pfam | 165 | 210 | 46 | 6.7E-7 | ||
| SMART | 166 | 215 | 50 | 1.4E-8 | ||
| Coils | 199 | 226 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi1g1v0489800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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