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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0490500 |
| Transcript ID | LotjaGi1g1v0490500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-coenzyme A thioesterase 9, mitochondrial; TAIR: AT5G48370.1 Thioesterase/thiol ester dehydrase-isomerase superfamily protein; Swiss-Prot: sp|Q9Y305|ACOT9_HUMAN Acyl-coenzyme A thioesterase 9, mitochondrial; TrEMBL-Plants: tr|I1N434|I1N434_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0490500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100397998..100401839) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAACCTACATCACAAATGTGCAAAAAACGAAAAATAAACTAAATACCTATATAGAATAAATAAAAAAGATATTAAT TCCCCGTGCACGGGTTAAAAACTAGTAAAAACAAAACAAGAGACTTTGTGTCTTTCTGTCGAAAGGAAAGAATCAACACA ATGGATTTGAATGCGTCTCCTTCCAACAACACGATTCCCGTGAATGGCACAATCCCTGTTGCTTCCACGTTTGCCACCGC CACCACCATCCCATCGGAAAACCCACCTCCGGCCAACGCCTCCGGCGACCGGAAACCCATCGCCTTGTGGCCGGGGATGT ACCATTCTCCGGTGACCACCGCTCTGTGGGAAGCAAGGTCCAAGATTTTCGAGAGGCTTCTCGACCCACCAAGGGATGCT CCTCCGCAAGGTGAATTGCTCACCAGAACCCCTTCTCAGAGCAGGACCAGCATCCTCTACAACTTCTCCTCTGATTTTGT GCTCAGAGAGCAGTATAGGGATCCCTGGAATGAGGTCAGAATTGGCAAGTTGCTGGAAGATCTTGATGCCTTAGCTGGAA CTATTTCTGTTAAGGTACCATGTTGAAGTTTCCATGTTTTTGTTGTTTTTTGAATTTTTTAGGGTTTTTGGAATTTATTA TGTGGTTGTTCATTGTGATAATATGATTACATGATCAAACTGGGATGGGGTTGAACTTCAAAATAAGTAGGTTGAATTAT GTTGACAGACAGTTGTGGTTTCAGTTCATTTTTAAATTTTTTATTTTCAGTTTGTGTTTTATGATTTTTGAGGGTTTTGT GGGAATTCATTATGTGGGTGTTGCATGTAACATGATTACATGGTCAAGTGGGGATGTAAACTGTGATGGGGTTGAACTTC ATAGTAGGTAGGTTTTATTTTGATGACAGGAAGTTGTGGTTTAAGTTGTTGTTTTTTGAAAAAAAAATTTATATTACTGA TTTTTTTTAGGTTTTTATGGGAATGGATTATGTGAAATATGAATATTGCTTGTAATGTGGCTATCTGCTCAAGTGGGGAT GTAAGTGTTGAACTTCAAATTAGGTTGTATGTAGTAGCATAGTAGGTGAGTTGTAGTTTGACACTTGCATTTAGGAAGTC TTGCCATGTTCATTCATCTAATTTTTGAGAGTTGAGCAAGGTACTGCACCAAGTAACTAATATTTTTGGCTTTTCTTGCA ATGAGCTGAGTATGGTAATTGACAAGCTTGCTTCTGTTATGTGGAGCAAAATGTGACCAATCCATTATATGTTTTAATCA GGATTTTGTTTATCTGTTTTTTTGACGGTGTTATTTTATATTTTGTGGTATAGCACTGTTCTGATGAAGCTAGCACAACA AGGCCGCTTATAGTTGTCACTGCTTCTGTGGATAAGATTGTGCTAAAGAAGCCAATTAGTGTTGACATTGATCTCAAAAT AGTTGGTTCTGTTATATGGGTTGGGCGCTCCTCAATAGAGATTCAACTTGAGGTTACTCAGTCCAAAGAAGGTACATTTC ATAGGGCTCACACATATTTGACAATTCGAGTAATTGACCGTGTCCAAACATAACTACATTCTCAATTTCTCTTTGCCTCT CAGGACAGAGTTTGTCTTGTTGCACAAACCTTATAAGCAAAAAAACTCTCATTGTTACCTCCGCACAACAATAATAATTT CTGGTGTTGTTTGCAAACTTTCATGAATTTTTTTTTTTTAATTTCCATAACATTTTCAGAAGATTATCATTGTTTTATAT CAAATGACACTCGCTCAACTTATCTGTCATCAAAACTCATGCAGAGGGCAGTGATGCAGACTCAGTAGCACTAACAGCAA ACTTCATATTCGTTGCTCGAGACTCTAAAACTGGGAAGGCTGCTCCTGTGAATCGACTTTCACCAGAAACTGATCTTGAA AAACATCTTTATGAGCAAGCTGAAGCAAGAAACAATTTGAGAAAAAGGAAACGAGGAGGGGGAAAGAGGGACTTCGATAA TGGAGAGGAAAATAGGCTTAAGCCGCTATTGGCTGAGGGAAGAGTATTCTGCGACATGCCAGCCTTAGCTGACCGAGACA GCATTTTACTAAGAGATACCAGCCTTGAGAACTCTTTAATATGCCAGCCACAGCAAAGGAACATCCATGGTCGAATATTT GGAGGCTTCTTGATGCATCGTGCATTTGAATTGGCTTTCTCTACAGCATATGCCTTTGCTGGATTGGTTCCCTATTTTCT TGAAGTGGATCATGTTGATTTCCTAAGACCTGTGAGTATCTTCTCCATTCTTTTTAAAATATCAAAATTAAACTTTTACA TGATGATGTATTATGTGCACAACTGGAACAATCTTTGAAATTTCTTTGACCAATTTGAATTCAATTACAGTTGCTTTCAA AAATAAAAATGATACAGGTGTTTCAGATTGCTTGAATTTACCTCCAAAATCTGGAGTAATTTATTAGTCACTTCACTCAC ATGTATATTCTTAGTATGTGGAAGAGAGGGAGGAGAGGGGGGCAGGGAAGTATTCCAATTTACAACAGTTTTTTGGATAA AATACAACAGTTAATTTTGTGATATTGTGTGTGCTTTGATTCTGATCCTCTCAAGTCGCATGATTTTGTCAAGTGAAACT TCGTTTCTATTTCTCTCTTCACAATTATTCAGAAAGTCTCACCTATTGAATTGGTATGAATTGAGAGATAGACAAAATTT TAGCATGACAGTGTCCTGCAAATTGTCCACCGGAGAGAATCATGATCCGTGTGTACTTATACCAAAATACATAATGATTC TGCAGATTTTCTGCTCTTCTATTTTCTTTACACCTATCCCCCACCTCAAACTTGTTTCGCCTATATTTCTAATGTTTATA TTGGATTTAAGCAATAATATAGAAAATGAACCATTGAGCAGGTTGATGTGGGGGATTTCTTGCGTCTCAAATCCTGTGTT CTGTACACTGAACCTCACGACCCAGATCAGCCACTCATCAATGTTGAGGTTGTTGCACATGTTACAAGACCTGAGATACG ATCTAGTGAGGTTAGTCTAACTGAACTGCACTCTTCTATTCTTGCAGCTTTTTCAAGTAGTTGAAGATTGTAATCAGCTT TGTTTTTTTCTGTTGTGTTATGTGAAACAGGTATCAAACACTTTCCATTTCACCTTCACACTACGTCCAGAGGCTAAAGC TATGAAAAATGGATTTAAACTTCGAAATGTGGTGCCAGCAACGGAGGAAGAAGCACGCCGCATACTAGAGCGCATAGATG CTGACAACTTGAATGAATTCTTCAGAACATAAGAAGAGAAACAGCAATCAGCTGGTAAAGTATATAAAATGGCTAATGGC TACCACATATGAGCTGAAGTTCAAAGATTAGCTTTTATATATAATAATTTTCCTGTCCAATCATTGAGGGCGCAAGTTAG CCTTGTATGGAGCATCATTGGACTTGATATATGGCAATTGGTGCTTAGATAGCATGTATACGAACCTTATTTTTAGAATA CACCTGCTTATATCATATACATATATGAATGAATGAATAAATGTCTACACATATATATAACAAGTTAAGGGTTTTCATAC ATTCACATCTACTTTTTCTTGCATCTCATTTTCACTTATTTTCTCTATCATATCTCTTATGTCGCTCTTGGATTTTGGGT ATTGAAAAAAAAATCCACATGTTTATGATGAATTTTAAGCAGTTTATTACATATATCAGCTCTTGTTTAATTTAATTTAC ACGTTATTTTTAATTAAGGTTTAATTAGCCTACTTTCAAAAAAAAGGTTTAATTAGCCTACAAATCTTTGTATTATTTCT GT
CDS sequence (LotjaGi1g1v0490500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTGAATGCGTCTCCTTCCAACAACACGATTCCCGTGAATGGCACAATCCCTGTTGCTTCCACGTTTGCCACCGC CACCACCATCCCATCGGAAAACCCACCTCCGGCCAACGCCTCCGGCGACCGGAAACCCATCGCCTTGTGGCCGGGGATGT ACCATTCTCCGGTGACCACCGCTCTGTGGGAAGCAAGGTCCAAGATTTTCGAGAGGCTTCTCGACCCACCAAGGGATGCT CCTCCGCAAGGTGAATTGCTCACCAGAACCCCTTCTCAGAGCAGGACCAGCATCCTCTACAACTTCTCCTCTGATTTTGT GCTCAGAGAGCAGTATAGGGATCCCTGGAATGAGGTCAGAATTGGCAAGTTGCTGGAAGATCTTGATGCCTTAGCTGGAA CTATTTCTGTTAAGCACTGTTCTGATGAAGCTAGCACAACAAGGCCGCTTATAGTTGTCACTGCTTCTGTGGATAAGATT GTGCTAAAGAAGCCAATTAGTGTTGACATTGATCTCAAAATAGTTGGTTCTGTTATATGGGTTGGGCGCTCCTCAATAGA GATTCAACTTGAGGTTACTCAGTCCAAAGAAGAGGGCAGTGATGCAGACTCAGTAGCACTAACAGCAAACTTCATATTCG TTGCTCGAGACTCTAAAACTGGGAAGGCTGCTCCTGTGAATCGACTTTCACCAGAAACTGATCTTGAAAAACATCTTTAT GAGCAAGCTGAAGCAAGAAACAATTTGAGAAAAAGGAAACGAGGAGGGGGAAAGAGGGACTTCGATAATGGAGAGGAAAA TAGGCTTAAGCCGCTATTGGCTGAGGGAAGAGTATTCTGCGACATGCCAGCCTTAGCTGACCGAGACAGCATTTTACTAA GAGATACCAGCCTTGAGAACTCTTTAATATGCCAGCCACAGCAAAGGAACATCCATGGTCGAATATTTGGAGGCTTCTTG ATGCATCGTGCATTTGAATTGGCTTTCTCTACAGCATATGCCTTTGCTGGATTGGTTCCCTATTTTCTTGAAGTGGATCA TGTTGATTTCCTAAGACCTGTTGATGTGGGGGATTTCTTGCGTCTCAAATCCTGTGTTCTGTACACTGAACCTCACGACC CAGATCAGCCACTCATCAATGTTGAGGTTGTTGCACATGTTACAAGACCTGAGATACGATCTAGTGAGGTATCAAACACT TTCCATTTCACCTTCACACTACGTCCAGAGGCTAAAGCTATGAAAAATGGATTTAAACTTCGAAATGTGGTGCCAGCAAC GGAGGAAGAAGCACGCCGCATACTAGAGCGCATAGATGCTGACAACTTGAATGAATTCTTCAGAACATAA
Protein sequence (LotjaGi1g1v0490500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLNASPSNNTIPVNGTIPVASTFATATTIPSENPPPANASGDRKPIALWPGMYHSPVTTALWEARSKIFERLLDPPRDA PPQGELLTRTPSQSRTSILYNFSSDFVLREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDEASTTRPLIVVTASVDKI VLKKPISVDIDLKIVGSVIWVGRSSIEIQLEVTQSKEEGSDADSVALTANFIFVARDSKTGKAAPVNRLSPETDLEKHLY EQAEARNNLRKRKRGGGKRDFDNGEENRLKPLLAEGRVFCDMPALADRDSILLRDTSLENSLICQPQQRNIHGRIFGGFL MHRAFELAFSTAYAFAGLVPYFLEVDHVDFLRPVDVGDFLRLKSCVLYTEPHDPDQPLINVEVVAHVTRPEIRSSEVSNT FHFTFTLRPEAKAMKNGFKLRNVVPATEEEARRILERIDADNLNEFFRT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 443 | 427 | 4.2E-227 | – | |
| PANTHER | 17 | 443 | 427 | 4.2E-227 | – | |
| ProSiteProfiles | 98 | 219 | 122 | 21.778 | ||
| Gene3D | 101 | 259 | 159 | 5.5E-44 | – | |
| CDD | 102 | 227 | 126 | 6.40811E-29 | – | |
| SUPERFAMILY | 103 | 253 | 151 | 1.32E-26 | ||
| Gene3D | 286 | 444 | 159 | 2.9E-36 | – | |
| SUPERFAMILY | 293 | 436 | 144 | 1.83E-23 | ||
| ProSiteProfiles | 294 | 411 | 118 | 28.168 | ||
| CDD | 295 | 410 | 116 | 7.15002E-31 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0490500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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