Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0493500 |
| Transcript ID | LotjaGi1g1v0493500.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ELMO domain-containing protein, putative; TAIR: AT3G60260.1 ELMO/CED-12 family protein; Swiss-Prot: sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A; TrEMBL-Plants: tr|A0A151QWE0|A0A151QWE0_CAJCA ELMO domain-containing protein A; Found in the gene: LotjaGi1g1v0493500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100696691..100701592) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATGATAGAGGTGGTTCATTCGTCGCTGTTAGGAGGATTTCGCAGGGTCTTGACCGAGGCAACGCGTGCCATTCAAC TTCTGGTAAAAATTTTCGTCCTTCAATTTCTCTCGTGATTTTCGAGGCTCTCTCTTTCCGTGACATGTGATTCGTTTTTG TTTTCTTTCTTTCTTTCTTCACCCCAATTTTTCACGTGTCTTTGAATTGAGATTGTGCTCACTTGCGTTGTGATTGATGT CTGCGGGTATTCAAAATTGCGTTGGTGGGTAGATTAACTACTTCTTACTGTATACATGATTTTTTTATTCATTTGATTTG ATTGGGTAGAGTATTTCCTATTTGAGATCTGTATCTAGCTCAGATTACTATGAAAGATGTTAGTAATTTTAGTTTTGAAA GTTGTTAACTATGCTTAATTTATAAGTATCATCATCTTGGTGGGGTTACCTCATAGATCTAGCATTCATGATTTCCACAT ATATAGGAAAATGCAGATATCTAATTGAGTACAGAAACAGTGGAAATTTGAAAGTAAAGCAAGCAGGTGGTGTAGCCAAG TGGCTAGCATAATGATGGAGAAAAAGCTAGTGGCTAGCATAATGATTACAGTATAGACTTCAAAATATTTGTCAATTGAA ACATCATTTAGAAAGCACTGGAAAAGGAAATGGAGAAGAGAGATAAATAATGATTGTTTATATAAGATGAGTGCTTTTGG AAGCTAATTAAGCTGAACAGAAGTGTTGATTTGCTGATGATAATTAATTATTAATAGGACACATGATTTCTGTCGATCAG CTTGTTATAAAGTTGTTGCACAAAATTTGGAATCTCAATTTTCATTTATGGGCAGTTTTCTTTTGTTACAGCTGAGTTTG TGACAGGATCAACTGCATGGATTGGCAGAGGTTTGTCATGTGTCTGTGCACAGAGAAGAGAGAGCGATGCTCGGCCCTCT TTTGATTTAACTCCATCTCAGGTTAAATTTTTTGTGATTTAATACCTAAGCAGCAATTTGATACTCAATAAGTCATTCTG TTAATTTTTCTATTGCCATCTTGCTACAAACAAACTACAAAATTATATGTCGTATGAAGTAATGAAAAACATTTATTGTG ACTATGTGCTCATTTTATGGTTTCTGGAAATTTTTTAATTTACGTTTCATTGAGTGCTTGCTATGAAGTTGTAAGAATTT CCATCACGCCAATGTTTCACAAAGTTGGCTTTTATGTTTTTGATGTTTGCTTGTGATGCGTACCTTCTGACATCAAAATA ATATGTCACTCTGTGCTTATTGTTTAAAATTATGGCATGATAAATTCTCAATGCTGAACTTTCAATTATCAGGAGGAATG CTTGCAGAGGCTACAGAGTCGTATAGATGTTCAATATGATAGTTCTATCCCTGAGCACCAGGTAACCTTTCTATTAATAT TCTCAAGTCTCTGCGATATGACAATAACTAAGAGACGTCATGCCTGTATCCATAGTTTTCTGTGCTGTGACTTATTCTTA TTACATATGTGCAATCTTCTTCTATTAATTTTGATTGTAATCTAGGTTTGTTTTTATGCATTATCTTAGGATGCCCTAAG GGCTTTATGGAATGCTGCTTTTCCTGAAGAAGAACTCAAGGGTATGATTTCTGAGCAGTGGAAGGACATGGGCTGGCAAG GAAAGGATCCAGCAACAGATTTTAGGTAGATATTATTCTGGTTGTTTTCATGTCAATGCCATATGTTGTCTTTCTAACTA CTTTTGCTAATTATTTCTTTGTGGAAATTTGGCAGGGGTGGTGGTTACATATCATTAGAAAATTTGCTCTTTTTTGCGAG GAATTTCCCGGTATGCTCTATTTCTCCTTATTTTCACTCTTTCTAGTGTTTTAATAAATAATCTGGAGACCAGGTTTTCT CTTGGGTTTATGGAGATAGTCTTGCTATACTACATCAAAATCTTATTATCTTACTTTGACATTATTTTTCATTCAGACCT ATACCTTATTTTTATTTGTTTTTAAATCTTATATCCCATATATCTGTCCATAATAGTAATACCATACCTCTTGTTTCTTG CATGCTTTCTTAGATGATTGATGTAAGAAAAAAGGCTAACAGGTACCAATTTAGCTGAAGTCCTTCCTGATCTAAACAAA ATTCTTGTGTTTGGATTTTGTTCCATTGCTTTATCTTTGAGGCAGTATATGATTTTCTATTTGAATTATAAATAAGGAAT GAGAATGATATTGAAATTGATTGATCTTGTTTTTCTTTCCTAATGGCTTCTCTATCAAACTATACCGGCTCCATGAGTTC ATGTAAACTATAAAATCATGCAACTTTGTAGTTAACTTTTACTCATTGTTCACCATTGCCCGAACATTGAGGATCTGAGG ACCAATGTGGACATTATATAAATTCTGAATTGAGATAATATGCCTTAAATGATGAAATTCTCGGCAGATAATTTTAAAAT ATGATGTGTCTATGGTAGTTTAAATCATGTTTTGACTCGTAGAATCACATGATTTTACAATTTTTGATGGTCTGACCGAT TCGAATCGTGGTGGAATTGCGAACCAGTGAAATCGCCACCTCAATCAGTGGAAGTAGGGATTTCATCGTGCTGGAGAAGA TATGGGAACCTGTGACCCGTTTTCACTTATAACCCGAAACCTATCTCTACCCTAACCTGAAAGGAAAGATTGGCTCTTCT GAGGCGTTTCATTTTCAAGCTCAAACATACCTGAAACTGAGATTGTCAAACATTGATCCCTTCCTTCCTCTTTTGCAACT GTGAGATTGAGAACCCATCTCTCTGTTTTTTCATCTTCTATGACTGCGATCCTATTGCCTATGAGTTTGAAAGCATTGAA CAATCCTCACCTCATGAGAGTTAGGTCCAACCCAAATTCAAGACTTAGTTGTGCTATTTTATATGCATATATACGTAAAT TTTGTAAAATCGTAAGATTCATGTTAGATTCCATGATTTACAATATTCACTCCCTTTCCTGATTCTAGGTAGAATCTAAA TTCTATACCTTAGATGTGTCCTCTTTTTCATGCTGACATCTCAAGCTTTGCTGCATATTTTACGCTTTTTTGGCGTCGGA GAATAGACTGCATGATACTTTTGTTATGAATGGTTTTGTCCTATAGGAATAGTTATGTATAAGACACATGGCTGTGCTCT TTCAGATTTTATTAGACACATTTTTTGTATTTCTATAAGACCCTTGTCTCTACAGGTTTTGTCTTTATTAATATACTATT GGTTCAGTCCCTCAAGAGCTGTCTCAATGACCTTAAATCAAATATGTTTTTGCTTATTCATGTCTCTCTATTGCAAAACT TATACATTTCGTTTTGTAGAAATCTTTTCAGGACCTTTTACGCAAGCAGGAAGGAGATCGATCAGTGTGGGAATACCCAT TTGCTGTTGCTGGTGTTAACATAACATTCATGCTTATTCAGATGCTGGATCTTGAAGCAGGTTTATAAGTTTTCCTCTTA TTGTAATCTTCTACTCTCAACATAGATCATGTCTATGAGGTATAGATGCCTATACAGGCATATTAATTTCTGCCTTTCGG ACTCTGATATGTCAACTTCATAGAGCACTACCAAGTTGAAATTGCTTTGAATTTAAAGGGCCCTTTGAATGCTATTTCCG ACGTAAATATGCTTATATTATTTTTCCATTTACTTTTGCATACTTTATTGTTCCCACAGTCACCAGTGATCATTATCTGA ATGATTGTTGGTGCTCTGTTGTAATTCTAAGGAATTAGATTAGTTGTGTTAAGGGCCTGTTTGAAATAATAGAAGTTGGT ATTCCAATCCAATGACATCAGTAGCGTCTTACATTCACACCCAACCTTCAAACATTTTTATGACAATGATTTGCACATTA TACAACTTACTAAAATTCTAGAAAGGCAAATAATATTGCGAGGTCCTTGATACATTTTGGTTTCTTTTACTTCATGTAAC ATCGCTCTTCTGTTGTTATCCAACATATGGTGTGTTACCAACCTTATAATATTCTCGACTATATTTTCTGATGAGATATC ATGAGAATACATGGCATTTAATACTGGTTTTTGCATGATAGATGTCTTTCCCAACCAATGAATGTACTTTGATTATGATG TTATCTGCTAATAATATTATGTTGATTTCCTTGACAGTCAAGCCACGGACACTTGTAGGAGCAACTTTCCTTCAATTTCT TGCAGGTATAGCCTTTATTGTTCTGCCTGCTAATCAATTAATTTCACTTGTTTTTTTCTTCAGTTAGGAAGGGAAGCAGG GTATGAAGGCTTTGGTGATGAACATTTTTCTGACTATACCTTTCTTTCATCTTTTTTTCTCTGATTGTTTTGATTTCTTT CTCTCACCTATGTCCGGGTGCCTATTTCATTTGTAATAGATTTTTGAAAATCTTTCATAACAAATGGCATTGCTCTAAGA AAATACTTGTTTTTTAAAACATTATAGTTTTTAATAGATAGTGGCTGTCCTCATTGTATGTCTGTTTGCTGTTCTGAGTA ACTAATTTCATTTATGTGACAGAAAACGAATCAGCTTTTGATCTTCTCTATTGCATTACGTTCAAGCTGATGGATCATCA ATGGCTTTCTATGCGCGCATCATACATGGATTTTAATGTAATGTATTTCTCTGAGTATAATCCATATATAGGGAAAGATG ATGATTCTAGCAACTTTATTAATATATTTTCCTAAGATTGCTAGTATCTTTGCTAATATGATATATGTTGCTTATAACAG ACAGTGATGAAATCTACACGCCGTCAGCTGGAGAATGAGCTTCTGCTTGAAGACATTACACGGCTTGAAGATGTACCCTC ATACAAACTTCTCGCACGATAG
CDS sequence (LotjaGi1g1v0493500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGATAGAGGTGGTTCATTCGTCGCTGTTAGGAGGATTTCGCAGGGTCTTGACCGAGGCAACGCGTGCCATTCAAC TTCTGGATCAACTGCATGGATTGGCAGAGGTTTGTCATGTGTCTGTGCACAGAGAAGAGAGAGCGATGCTCGGCCCTCTT TTGATTTAACTCCATCTCAGGAGGAATGCTTGCAGAGGCTACAGAGTCGTATAGATGTTCAATATGATAGTTCTATCCCT GAGCACCAGGATGCCCTAAGGGCTTTATGGAATGCTGCTTTTCCTGAAGAAGAACTCAAGGGTATGATTTCTGAGCAGTG GAAGGACATGGGCTGGCAAGGAAAGGATCCAGCAACAGATTTTAGGGGTGGTGGTTACATATCATTAGAAAATTTGCTCT TTTTTGCGAGGAATTTCCCGAAATCTTTTCAGGACCTTTTACGCAAGCAGGAAGGAGATCGATCAGTGTGGGAATACCCA TTTGCTGTTGCTGGTGTTAACATAACATTCATGCTTATTCAGATGCTGGATCTTGAAGCAGTCAAGCCACGGACACTTGT AGGAGCAACTTTCCTTCAATTTCTTGCAGAAAACGAATCAGCTTTTGATCTTCTCTATTGCATTACGTTCAAGCTGATGG ATCATCAATGGCTTTCTATGCGCGCATCATACATGGATTTTAATACAGTGATGAAATCTACACGCCGTCAGCTGGAGAAT GAGCTTCTGCTTGAAGACATTACACGGCTTGAAGATGTACCCTCATACAAACTTCTCGCACGATAG
Protein sequence (LotjaGi1g1v0493500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDDRGGSFVAVRRISQGLDRGNACHSTSGSTAWIGRGLSCVCAQRRESDARPSFDLTPSQEECLQRLQSRIDVQYDSSIP EHQDALRALWNAAFPEEELKGMISEQWKDMGWQGKDPATDFRGGGYISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYP FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLQFLAENESAFDLLYCITFKLMDHQWLSMRASYMDFNTVMKSTRRQLEN ELLLEDITRLEDVPSYKLLAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 261 | 261 | 3.4E-158 | – | |
| PANTHER | 1 | 261 | 261 | 3.4E-158 | – | |
| Pfam | 66 | 231 | 166 | 1.6E-49 | ||
| ProSiteProfiles | 81 | 242 | 162 | 30.498 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0493500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…