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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0496300 |
| Transcript ID | LotjaGi1g1v0496300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UPF0565 protein C2orf69-like protein; TAIR: AT2G44850.2 hypothetical protein; Swiss-Prot: sp|A0JMH2|CB069_DANRE UPF0565 protein C2orf69 homolog; TrEMBL-Plants: tr|A0A151UBQ9|A0A151UBQ9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0496300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101137392..101140015) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAACGTTGGAGTGGGGTTTTGAGAGTCCCACTGCATCCTAACAGCAAGGCATTCCATAGAGTTGGTGCATCTCTCTG CCTTTCTCCGGAAACAGGAACTTTGAGTGTAAGTTAGTTCCTTGAAGTTGAACCCTAAAGCTTATAGATAACAGTGGATA TTTCGCTTCACATCATCCAAAAGTGGATTGGTTTTCTTACTTTAACTATCAGTCTTTTAATCTTATGTTTTAGCTGTAGG TATAAAGCTTAGCTTTGTTTTCTATACAAAAGAAAGTTGAAAATCGTGCACTGGTCTGAATGTAAGAGCCCGTTTGGACA AAAAGTGCCTTGGAATGTGTTATTTTTCCGTTTTCATACTCCTGGATTGGTATCAAACGGGCTTTAAGTTGTTTGAGTTA CCAATTTTTTAGTAATCAAAGAACCAAAAATGGAAGCATATCAGGCCTAAAAGTATTTTATGTGTGAAAGAGGAGTGCTA CAAATTGATTAATCATTTGCTACAAATTGTAAGTAATCAATGGTTAATTCTTCTGGAATCTGGATTGGTTTATTTTGGCC ACTCCCTGAACTGCGGTTGAATTTTGTGGAATGAGAGGTTTTTATATAAAGGTTACTACTTACCACTGTTTGGAAAATGT GAAAGAGGAGTGCTACAAACGCAGTCTCAAACACACTCTTTTCAACACTCTTATTGGTTGAAATTCAAATTCAACCAATA AGAGACTGCGTGTGAGAAAGTGTGTTACTAGCATTCCTCAATATGAAACATAGCATTTTAATGAGGTTGGCTGGTTGCGA CTTGCAACTTCCAATTGAGATGTCACAGTTTCAATTTCTTGGATAAGGATGTTCTCAAACTTGTACATCACTGGTGCCCC TTTGCATACCGAGTGTTATTTACTAAAAATGTTCTGATTCGTTACAGGTACCTATCGCAAACGCCATCTTTTTCTGCGGT GATCGAGTTGAAGGGACTGGTAACCCAGTGATTGAGCGGCTATCAGATTTACAGAAACTATCTGAAATTGTTGTATCCAA ATTTGGCTCTTTCATCAATGCGTGGGTTATTGAGTCTTCTGTTTATAAAGGACCTTTTGCTGTCTACAAGGACTTCATAC CATCAGTGAATCAATATGGAGAGCCAAGCTCATACCATCCAATTGGATTCCCGGCATCCACTTCAACTGTCTCACTCTTA TCTAATTGCCTTGAAGAAGTATGGCCTGTTCTTCCCCTTTATTATGTGCTACAAAGTTTACCATTTTCTATGACTATATC TAATTCGGGCAGTTATGGAGTTCAATCAAGTAATATTTTGGCTCTTATCGCATAGTTCAAGAATATGAGCATAAAGATAT ATTTGTGTTGATGGATTAAAATCTGAACCAGTACTGATTTTCATGTAATAATTTTTTTTCTTAAGGTTAGGCTACTTTCT TGCACTTATATAAATTCCTACTTTTCCCCGAATAAAAGGAGAAATTTCTTATTACATCTCTTTCAGTTATTCGCTACATT TTGCATTTTTATGGATATGAATGGATAGGTGTTGTATTGATTGATGGAAATTGGAGCCAAGCTCCTTAAAGAAAATAAGA AAAATCACTGCAACTAAAGACTTTCAATGCGAGAATCCCCACTGTCTCCATAAAATTTTCCTACCTTCTCTTTTTCCCTC TCTGCTTTCAATAATTTCTTCTAACGAAATTCATGCCTTCATCTTTCCTGCCACATTTGCAGTGTGCTTAGAACATAAAT TCCCATCTTGACCCTGATTCTCATCAACTAACCTTTATAACCATGACTCCTAACCGAATCTTTAGCAGTTGTATTCCATA TCCAAACCAGATTCTAGCTTCTTAACTTCTCTAAATTAATGTCATATATAAAGCTTTACATGAGGCCAATATACTACACC AGATGAGATATCACTTCAGTGATTGTCCAATAGTAAAAACAGTCATTTGCGTCCGTTTGCAACTAGTAATAACTACTTGA AATAATTTCTTTCGATGTTTTGAATTTCTTGTAATGCAGGTAAAGAAAGTCATTTTAGGAAAGCAAGTAGATACCAAGTT TGTTCACACTCCTTCCTGTTGTTCCTCTCAGCCCAAGACATTCATCCTCGGATTTAGCAAAGGTGGAACTGTACTTAACC AGATAGTTACTGAGCTCGGCTTCTCAGATATCGGATCTAATCCATATCCACTGGATGCAGGACAGCCAATGGACAGAAAG ATAAGCAGATCAGAGGAGATTTATGTCGTACCTAAAACAAAGGAAGGCTTACTGAACAGCATCAGTGAGATTCATTATGT TGATGTTGGTTTGAACTCTACTGGGGCATACTTAACTAACCTTGAAGTGTTTGAGGGGATATCCAAAAGGCTCATACAAG GAGCTCCTAAACTCCGTTTCATCCTTCACGGAACTCCGAGACAATGGGGCGACAAGCGGCGAGACTGGATTCGGAAGGAA AAGGACGGAATGCTGCATCTGCTTGAATCTGAAGCCTGCAAGAGTGGTGGAAAACTACAAGTATTTGCAAGGTATTATTT TGCTGATAAGCCTTCGAATATGCAGATGCACTTTGAAATCATTGAAAGTTTAGACGTCAGTTAA
CDS sequence (LotjaGi1g1v0496300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACGTTGGAGTGGGGTTTTGAGAGTCCCACTGCATCCTAACAGCAAGGCATTCCATAGAGTTGGTGCATCTCTCTG CCTTTCTCCGGAAACAGGAACTTTGAGTGTACCTATCGCAAACGCCATCTTTTTCTGCGGTGATCGAGTTGAAGGGACTG GTAACCCAGTGATTGAGCGGCTATCAGATTTACAGAAACTATCTGAAATTGTTGTATCCAAATTTGGCTCTTTCATCAAT GCGTGGGTTATTGAGTCTTCTGTTTATAAAGGACCTTTTGCTGTCTACAAGGACTTCATACCATCAGTGAATCAATATGG AGAGCCAAGCTCATACCATCCAATTGGATTCCCGGCATCCACTTCAACTGTCTCACTCTTATCTAATTGCCTTGAAGAAG TAAAGAAAGTCATTTTAGGAAAGCAAGTAGATACCAAGTTTGTTCACACTCCTTCCTGTTGTTCCTCTCAGCCCAAGACA TTCATCCTCGGATTTAGCAAAGGTGGAACTGTACTTAACCAGATAGTTACTGAGCTCGGCTTCTCAGATATCGGATCTAA TCCATATCCACTGGATGCAGGACAGCCAATGGACAGAAAGATAAGCAGATCAGAGGAGATTTATGTCGTACCTAAAACAA AGGAAGGCTTACTGAACAGCATCAGTGAGATTCATTATGTTGATGTTGGTTTGAACTCTACTGGGGCATACTTAACTAAC CTTGAAGTGTTTGAGGGGATATCCAAAAGGCTCATACAAGGAGCTCCTAAACTCCGTTTCATCCTTCACGGAACTCCGAG ACAATGGGGCGACAAGCGGCGAGACTGGATTCGGAAGGAAAAGGACGGAATGCTGCATCTGCTTGAATCTGAAGCCTGCA AGAGTGGTGGAAAACTACAAGTATTTGCAAGGTATTATTTTGCTGATAAGCCTTCGAATATGCAGATGCACTTTGAAATC ATTGAAAGTTTAGACGTCAGTTAA
Protein sequence (LotjaGi1g1v0496300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERWSGVLRVPLHPNSKAFHRVGASLCLSPETGTLSVPIANAIFFCGDRVEGTGNPVIERLSDLQKLSEIVVSKFGSFIN AWVIESSVYKGPFAVYKDFIPSVNQYGEPSSYHPIGFPASTSTVSLLSNCLEEVKKVILGKQVDTKFVHTPSCCSSQPKT FILGFSKGGTVLNQIVTELGFSDIGSNPYPLDAGQPMDRKISRSEEIYVVPKTKEGLLNSISEIHYVDVGLNSTGAYLTN LEVFEGISKRLIQGAPKLRFILHGTPRQWGDKRRDWIRKEKDGMLHLLESEACKSGGKLQVFARYYFADKPSNMQMHFEI IESLDVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 324 | 324 | 9.4E-94 | ||
| Pfam | 158 | 289 | 132 | 8.4E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0496300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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