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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0499700 |
| Transcript ID | LotjaGi1g1v0499700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WRKY family transcription factor; TAIR: AT5G15130.1 WRKY DNA-binding protein 72; Swiss-Prot: sp|Q9LXG8|WRK72_ARATH Probable WRKY transcription factor 72; TrEMBL-Plants: tr|G7KZU9|G7KZU9_MEDTR WRKY family transcription factor; Found in the gene: LotjaGi1g1v0499700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101572030..101579527) extracted from Lotus japonicus Gifu genome v1.2.
CAGCAATATATAGTTTACAACCAGCGTATGGACCGCGAACTTGACAGTGAAATACGCCTACAACATTCACAACAGATTCA ACTCGTTTCATTACATGTTGCAACTTTGACTCCATCCCCATGTGACGTCCTCTCATCAGTACGAAGCTTCAAGCCTTCAA CTACACTATTAAGTTATTACATGATTTTTATTCCAAAGTTTCAGCTTTCTTCTCCCCCTCCACCTCATTTATGACTTAGA TTTGGAGATCATATATATTTAACCACACTATAGTAATTAAAATATTCCCATAAATTAGTTTAATTAGCAAGTGGTGTTGA CATTTTAATGGGTACTAGATGAGCTTTGGGATCGGTGATTATATATTTGTTTATACTATGTCTAGTTCAGAGTTGATTCC TTTATAAAAGGGCATGTGTTATATGAGAGATTGAGCTAGAGAGATAATCATATTCATAATGTCAAAAAATTCTAGTCCTA GTGGTTCAGAGATAGAAGAGAAGAGAGTTACTTCTGTTTTTCTTGATGATGGTTTCAGCAATCAAGAAGTTAAAAAGGTA CTCATCAATTCTGTATCTTGTGCAACCTCTATTGTTTCTGGTTGATTTTCTTTGTCATGTACTCATGAATTTCTTTAAAT TTTGTGTGTCAAATACAGAACAATGAAAAACAGCTTTCTAAATTCAATTGATGTTTTTTTCAGTTTGTGTTTCTCATACC ATCATATAAAGTAGGAAGATTACTCTTCATGTAGTGCAAGCTTAATCAATTTAATTACCAAGCATGGGTTAGATATACAC ACGTTCCATTAAAAATTAACCATGTAATAATATTTGATCATGTTAGTCCAAAACAAATGTATGTTATTTTCTCCCTTACT TTGGACCATCTCTTTCTCTTTTTATTCGCAGTGTAACTTGTATATTCAGAAACTGTGTTTCTTATTCCACTGAATACATA AATTATACTCATGTAGTTTGAGTTTCACATCAATTACCAGAAGATGGGGAAACAACAGTTACTATGCTGTAGTTTGGCAT AAAAAATATGGCAAATTTAGCAATACTTAGAACCGGTTGGGTTGTGGATCAAAGAACACTTATTCGAGCTTAATTATTTA CTGCATTTTTTAGTAGAGAAGCTCCAATAAGTATTATATAGTCTCAACCCAAGCAAACAACTACGGACACCTTATTTCTT TGTCTCTTTTTTCTTATCATATCATATTATATATTGCATTCATTACTTCTCTATTTTCTCTTTCTTTCTCACTCGAGGGT ATGTCCGGGTGTCTGCACTTGCACGATGCGGATTTCAACAAATCATTTTTCGAAAAAATGAAATCTTTTCTTCTAGTTTC AAATTTATTGGTTGTCATTGAAATAGACAGATTGTCTTCTATACTATCGAACCCGTGGTCCATAAATTCAGGAATAATAT CGAGGATTCTGATTTATTGTTTTGAATTCTAGGTAGAAAGGCTCAAATCTGCAAAAGCTGAGATGGGTGAGGTGAAAGAA GAAAACGAGAGACTCAAGATGATGTTGAATCAAGTAGAAAAGGACTATCACTCACTTCAACTACGTTTCTTTGACATCCT CCACAAAGAAGTTTCCAACAAAGGTGTAGCTGAAAATTCACCTACTCCCCATGATCATGAAAATGAAGAACCTGAACTTG TGTCACTTTGCCTTGGAAGAGGACCTAGAGAATCTAAGAAAGGAGCAATAATAGAAAAGTTGAACCAACCAAGAGAAAAA GAAGATGTGGAAGTGAACCTTAGTCTTGGATTGGAGTCAAAATATCTTCTTTCAATGGAGGTGGTGTCTGATTTGAGTCC TGTGAACAGCTCAGAAGAATTACCAAAGGAAGTAGAGTTAGCTGAGGGAACATTGAAAACAAATAAATCAGCAAAAGTGG TGAATGTGAATGATGACATTTCAGATCAAATGCCTGCAAAGAAAGCCAGGGTATCTGTGAGAGCTAGATGTGACACTCCC ACGGTTAGCATCAATTAACGAAATTTTTTATTTGGGTTCTTGGATATTTTGATGGTTTTTGTAACTTCTTTTTCTTGTCA AAATAGCTAATGATGATTGTGCTTTGAATTGAAACAGATGAATGATGGATGCCAGTGGAGAAAATATGGACAGAAGATAG CAAAAGGAAATCCATGTCCACGAGCATATTATCGTTGCACAGTTGCACCAGCATGCCCAGTTAGGAAACAGGTATATGCT TGATTAAATATATGACCCAAGTCTCACATTGGCGAGTTGGGAGCAAAAACAAATGTATATAAATTGAGTTGTTATGATAA AAATCTGGAAATTGGAAACTCATCTTTTCATATATATAAATTGAGCTGTTATTCTCTCATATATATACATAAAAGATGGA TGATTAGGTTTCTAATTGCTTATCAATTTTTTTTAGGCTTAATCCAGTTTTTGGTCCCTATCCATTGTCATAAATATGGC TTTAATTCCTCGCCGGAGCAAAGGTGGGGATTGGTCCCCAGTTTTTTGCAAAATAGTTGGCTTTGGTCCTTCCGGCCGGT TGGGTCAACGCCGAAGCTCCGCCGGCTGATGTGGCCCTTGCCACGTCAATTAATGAGCCTCGCTGGATTTTTTTTTTCCC GTTTTCATTTAAAAAAATTAAGAAACTCAGATTAATCACCATCATTCAATCTTCATCTTCATCTTCCTCAACTTCATCTT TTCTTTCTTTCAGAAACCCAGAACAACATTAATTCTCAATCCCTAATTAACAAAAGAGTAAAATACACTCCCCTCCCTTG AGGTTTGCCAAAATGACACTCAACCCCATTCTTTGTTAAAAAATGCTAACAGAATATTCTCTTTAATTCCAAACTAATAA ATTTAAATATTTAAATAATAATAAAATTAAAAAATTCGGTTTATTACTTTTTATTTCAAGAAGTTTAAGATATTTACAAT TAAATATTTTCACAATGTTGTATAGGAATATCAATAACATTTAAGTTTACAAATATAAATTTAGACTAAACAAATACTTC TATTTTTCTTTTAACTTATTTTCATGATTAATTGTACTAACAAAATTTCATGATTAATTAGATGATATTTATTCCAATGA AAAGCCCAAAAACAAATTTATGATTGTTCTAGTCACCTTCTCAATTAGTATATTATTAGCTTCATAGATTGGTTGCACTT GCAACATGCAATATTATCTTAGCAAATAAAATGCGAAATGCAACAAATAACAGATGATTATTACGTGAGGTGCTTGGTCT ACTAGAATAACTGAATGAGGTATAGTTTCATATCTCAAAAAAATGGATTTAAATTCTTAGTAATCTCAATCACATGATGT TGTATGTCCTCCAATGATAGCTCAAGTGGTAAGAGCTTGGGGATGTATGAGTTGGGTATGGGCAGTTGCAATTTATCTTT TCAATGTACCAATATAAAATTAAAATATAATTCATATATCTTGAAATTATATAATCCAAGATGAATTTTATGAAGAAAAA AGTCATATAATATCATAAATTATATTGTGAGAATATTTGTAGCTTTCGTCAACATATAATACAGTAAATAGTTTAAAATA GATTATTATAGGCTTAAATGCATTTGGTGCCCCTGATGTATTTCAAAAGTGCAAATGATAACCCTACTCTTTTTTTGTAA ACGTTTGTACCCCCTTTGTTTTGAGAAAGTACACCGAATGCCCCTCCGTCAGGTTGACGTTAAAATCCTAACGGAGGAGC TGACGTGGATATTATTTTTACTTTTTCCTTTATTTTCTCTAATGCCACGTGGATTTTATCAACTAAAAACAAAAAAAAAG AAAAATGACAAAGGCTTCAAGAAATTGGTCTTCTTTCTCAGAACAAAGCTCGCCGGAGAAACGCCGGTGGCGGTGGTGGC GGTCGCCGGAGTGACGGTGGCCGATCGTCAAATTGATTGAGGGGTTTTGAAGCGGATGATGAGGGGAGTTTAGCCATGGT GTTGGTTTCTCCAAAAGGAGAGCGGTTCGCCGGAGATCGGAGGTTGAAGGTGGCGGCTAGGGTTTGGTTTCTCCTCTAGT TCTCTGTTGTTTCTCATCATGTTGGTGATGATGGTGCTCGCGGTGGTGCTGGACGTTGGTGGTGTGCTCGTATCTGAACC AGAGGTAAGGAAAAGAGGAAGATGATGGCTTGATGGTGCTGGTTCGTGAGGGAGAAGGTGGTGGTGCTCTGGCTCGCGTG AGGAGGGCGCGGTGGTGGCGGCTGGCACGCGGTGGTGCTGGACGTTGGTGGTGTGCTCGTATCTGAACCAGAGGTAAGGA AAAGAGGAAGATGATAGCTTGATGGTGCTGGTTCGTGAGGGAGAAGGTGGTGGTGCTCTGGCTCGCGTGAGGAGGGCGCG GTGGCGGCGGCTGGCACGCGGTGGTTGCTGGCGTGAGAGGAAGGAGGGAAACATGGTGAGGGTGATGATTCTTGCTGCTG TATCAGAAGAAGAGGAAAATGGGTTTGGAGAAGAAGAGAGAAAGAGAGATGTCGAGTGAGTGAGAAGAGAGAGAGCGTGA ATGAGGGTAATATCCACGTCAGCTCCTCCGTTAGGATTTTAACGTCAACCTGACGGAGGGGCATTCGGTGTACTTTCTCA AAACAAGGGGGTACAAACGTTTACAAAAAAAGAGTAGGGTTATCATTTGCACTTTTGAAATACATCAGGGGCACCAAATG CATTTAAGCCATTATTATAAAAATATTAATCGTAAATTTCTTAAACTTTTTTAAATAAAAATAATAATAAAAGATTTTTT TATTATTTGAAAATTTAAATCTATTAGTTTGGAATTAAAGAGAATATTCCGTGAGCATCTTTTAAGATGTAGTTAACTTG GTAGAATAGATGGGGTGGAGTGTAGATTTTAATTAAGAATGGGGCTGAGTGTCATATTGGCAAACCTTAAGGGAGGGGAG TCTAATTTACTCTTAACAAAATCTAATCCCTATTAACAATTCCCTAATTACTAAATCTGAACCTGACAAAATCCCTGAGA ACTCTTAGCATCCCGTTTTCCTGAAGCATCCGATTATAAAATTTTTGCAGACCATTGAAATCATTCCACATCTTTGCGCT CTTAAAACCAGCTAAAATAGGCTGATAAGTCTCTCCATCATCCTCATAGTAACCCAAAATTGCTTCACCGTCTCCTTATT CACCAAGATCCTAGCAATTAGACTATACATAGTAGAACTTGGCCTGAACCATTTTTTTTTTCATCATTCTCATCTTGTTC ATATGTATTTTCTCACAACAAACTGACAAAGAAATGAAAAAATCCAGAAAACCTCCGTTTCTAGATCCAGGACCAAGAAA TGCAAAAAAACCCAAAATCAACAACCCAGAAAACTCACCACCACCCCCAAAATGCAGATCTGAGGAAGAAGTCACCACCC CTCAATCACCAACAATCCCCATAGAACCCCAAAACCCTATCCCAGATCTGGTCTACAGTGGCATATAGAACCTCCATCGC TCCACCACGAGACCACCCAGGAGGAGAGAAAGGGATCGACTGTTTGGGGTTGGAAGGTTGAGGGTGGTGAGTGATGACGG CGGTTCGGTTGATGTGGTGGTTGCAGAGAAAAGATCGAAGGCGTGTGGGGGGTTGGGTTTGGAGAGACCCAAGCTGTAAT CTGATTTGCCATATCCCATATGAGTATTTTTTTTTCCCGATTCAACATAGCTAGACAAACTCCTTGGATTCTCTATCTTC CTTTCAAGATTAAGTTAAATTCCTCCTTTCCAGATTTTTTGGTTTTTATTTTTAAGAATTTTAAATAATTTCATTTTTTA AATTAATTATATTTTTAAAAAAATCCACCTAAGCTAATTAAATGATGTGGCAATGCCACGTGAGTTTCCCGGAGCTCCGG CGTTGACCCAACCTGCCGGAAGGACCAAAGCCAACTATTTTGCAAAAAACTGAGGACCAATCCCCACCTTTGCTCCGGCG AGGGACTAAAGCCATATTTATGACAAAGGATAGGGACAAAAAATGGATTAAGCCTTTTTTTTACTCCCTTATTGGTTATT TCCTTCATATATTCAATATATTTATGTAATTGAAGTTATTATTTCAGAGATATTCATTAAGAATACCCAAATCTAATGCA TGATTAACTAACTTCAGGTGCAAAGATGTGCTGATGACTTGTCCATCTTAATCACCACATATGAAGGAACCCACAACCAC CCACTTCCAGTCTCAGCAGCAGCCATAGCTTCCACCACTTCTGCTGCAGCTTCAATGCTTCTATCAGGTTCTTCAACATC TCACCATGCAGGTTACACTTCTGCACTCAGTGGTCTCAGTTTCAATCAGCAATTTGGTGAACAAAGAGCAAAACATGCCT TCTTACCACCAAACCAAGCCTCACATTTGTTCCCTACAGTCACTGTAGACCTCACTTCATCAAACAACATGGCTTCTTCA AACCAAAGATTTTCTCCAAACAGTCTTAGCTTTTGCTCCCCTCATGAGCCTAATTTCACACATTCCAATGTTTGGGGTAA TAAGGGGTTCCCCAATAATGGCACATTAAGACCCTTAAACCATTTCCAAGAACATAATTTCTACCATCAACAATGCATGA CAACAAACCAAACAAGTAATTCTTTGGCAGAAACAATTACCAAAGCAATCAGCACAGATCCAAGCCTTCACTCAGTGATA GCTGCTGCTGTTTCATCACTAGTGGGACCAAGTGGGAACCAAAAACCAGGGTTGAACTTGAAACTGGGTCAGCATCATGA TCATCAATTAGTTTCTTCTAATTTGTTGAACCAGAATAATGGGAAAGGATGCATAAATGGCTACTTTAAAAGGTTGACCT CTGCAAATTCTCAGGCCAGAAACTTCATGCTTCTCAAACCCACATTGCCATTTTCTGTTTCCAATAGTAGCACAGGCACA TCTCCTTCCATTGTTAATCAGATCAAGCATAATTATGATCCTGATATGAACACACATCATTAGCTATGTTTTCTTCTTTT TTGTGGCCAAGGTTTAGGATCCTCTTATTTCATGTTGAAATAAATATATAGGACCACACAAAGAGAAGGCAAAACGAGAA AATCAGCCGAAAATCAATGTTGTCGTCCCACAATCAAGTCATTCCATTCCATTTTTGTAACACTCGAGCAAATTGTTCAG ACTCAAAGGCAACACAGTTACTGAAATTAATTACTACGAATGTGTAAATTTAATTATTTTATTTTAGACTTAAATATATT TTTAGTCCTTATAAATAAGGGTCCTTTGGTTTTGGTCCCTACATTCCGTTTTTTGGTTTCAGTCCTCAATTATAAAGAAA TAGATGGTGGTTTCAGTTCCTTTCGTTAACATCATTTACAAAAAAAAATGAGTTGGCTAACATAGAGTGATGTGGCCGTT TAACACATCATCAATATTGCCCTAGTGGTATCCTACATGGCTATGAATTTTATTTGGC
CDS sequence (LotjaGi1g1v0499700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAAAAAATTCTAGTCCTAGTGGTTCAGAGATAGAAGAGAAGAGAGTTACTTCTGTTTTTCTTGATGATGGTTTCAG CAATCAAGAAGTTAAAAAGGTAGAAAGGCTCAAATCTGCAAAAGCTGAGATGGGTGAGGTGAAAGAAGAAAACGAGAGAC TCAAGATGATGTTGAATCAAGTAGAAAAGGACTATCACTCACTTCAACTACGTTTCTTTGACATCCTCCACAAAGAAGTT TCCAACAAAGGTGTAGCTGAAAATTCACCTACTCCCCATGATCATGAAAATGAAGAACCTGAACTTGTGTCACTTTGCCT TGGAAGAGGACCTAGAGAATCTAAGAAAGGAGCAATAATAGAAAAGTTGAACCAACCAAGAGAAAAAGAAGATGTGGAAG TGAACCTTAGTCTTGGATTGGAGTCAAAATATCTTCTTTCAATGGAGGTGGTGTCTGATTTGAGTCCTGTGAACAGCTCA GAAGAATTACCAAAGGAAGTAGAGTTAGCTGAGGGAACATTGAAAACAAATAAATCAGCAAAAGTGGTGAATGTGAATGA TGACATTTCAGATCAAATGCCTGCAAAGAAAGCCAGGGTATCTGTGAGAGCTAGATGTGACACTCCCACGATGAATGATG GATGCCAGTGGAGAAAATATGGACAGAAGATAGCAAAAGGAAATCCATGTCCACGAGCATATTATCGTTGCACAGTTGCA CCAGCATGCCCAGTTAGGAAACAGGTGCAAAGATGTGCTGATGACTTGTCCATCTTAATCACCACATATGAAGGAACCCA CAACCACCCACTTCCAGTCTCAGCAGCAGCCATAGCTTCCACCACTTCTGCTGCAGCTTCAATGCTTCTATCAGGTTCTT CAACATCTCACCATGCAGGTTACACTTCTGCACTCAGTGGTCTCAGTTTCAATCAGCAATTTGGTGAACAAAGAGCAAAA CATGCCTTCTTACCACCAAACCAAGCCTCACATTTGTTCCCTACAGTCACTGTAGACCTCACTTCATCAAACAACATGGC TTCTTCAAACCAAAGATTTTCTCCAAACAGTCTTAGCTTTTGCTCCCCTCATGAGCCTAATTTCACACATTCCAATGTTT GGGGTAATAAGGGGTTCCCCAATAATGGCACATTAAGACCCTTAAACCATTTCCAAGAACATAATTTCTACCATCAACAA TGCATGACAACAAACCAAACAAGTAATTCTTTGGCAGAAACAATTACCAAAGCAATCAGCACAGATCCAAGCCTTCACTC AGTGATAGCTGCTGCTGTTTCATCACTAGTGGGACCAAGTGGGAACCAAAAACCAGGGTTGAACTTGAAACTGGGTCAGC ATCATGATCATCAATTAGTTTCTTCTAATTTGTTGAACCAGAATAATGGGAAAGGATGCATAAATGGCTACTTTAAAAGG TTGACCTCTGCAAATTCTCAGGCCAGAAACTTCATGCTTCTCAAACCCACATTGCCATTTTCTGTTTCCAATAGTAGCAC AGGCACATCTCCTTCCATTGTTAATCAGATCAAGCATAATTATGATCCTGATATGAACACACATCATTAG
Protein sequence (LotjaGi1g1v0499700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKNSSPSGSEIEEKRVTSVFLDDGFSNQEVKKVERLKSAKAEMGEVKEENERLKMMLNQVEKDYHSLQLRFFDILHKEV SNKGVAENSPTPHDHENEEPELVSLCLGRGPRESKKGAIIEKLNQPREKEDVEVNLSLGLESKYLLSMEVVSDLSPVNSS EELPKEVELAEGTLKTNKSAKVVNVNDDISDQMPAKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVA PACPVRKQVQRCADDLSILITTYEGTHNHPLPVSAAAIASTTSAAASMLLSGSSTSHHAGYTSALSGLSFNQQFGEQRAK HAFLPPNQASHLFPTVTVDLTSSNNMASSNQRFSPNSLSFCSPHEPNFTHSNVWGNKGFPNNGTLRPLNHFQEHNFYHQQ CMTTNQTSNSLAETITKAISTDPSLHSVIAAAVSSLVGPSGNQKPGLNLKLGQHHDHQLVSSNLLNQNNGKGCINGYFKR LTSANSQARNFMLLKPTLPFSVSNSSTGTSPSIVNQIKHNYDPDMNTHH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 27 | 474 | 448 | 1.3E-145 | – | |
| PANTHER | 27 | 474 | 448 | 1.3E-145 | – | |
| Coils | 37 | 71 | 35 | - | – | |
| Gene3D | 195 | 273 | 79 | 7.4E-33 | ||
| SUPERFAMILY | 204 | 272 | 69 | 3.01E-27 | ||
| ProSiteProfiles | 206 | 272 | 67 | 28.392 | ||
| SMART | 211 | 271 | 61 | 3.5E-36 | ||
| Pfam | 212 | 270 | 59 | 2.6E-24 | ||
| MobiDBLite | 504 | 529 | 26 | - | – | |
| MobiDBLite | 504 | 521 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi1g1v0499700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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