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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0500600 |
Transcript ID | LotjaGi1g1v0500600.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Aldose 1-epimerase; TAIR: AT5G15140.1 Galactose mutarotase-like superfamily protein; Swiss-Prot: sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase; TrEMBL-Plants: tr|G7KZW8|G7KZW8_MEDTR Aldose 1-epimerase; Found in the gene: LotjaGi1g1v0500600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101686447..101691284) extracted from Lotus japonicus Gifu genome v1.2.
TGTGAACAAGTTGAAACAAAAAAAAGAGACATGAGGACAAGTGATAACCTCCACCAAATGTGCCGAGTCCGTTTGGCCCC AACCAATGCCTAGTCAGAGTATCATATAAACAGTGTCAACAAGCCGGAAATAGCAGAGTGCTTTTGTACATTCTTCCCAC ATTTTCTTGTGCATTCCCTGAATCTTTTTCTTTGCATTATTTCATATAACACAACAACCCCCTTCTGATACAAGAAAAAT GACCAAGATCCTTGTCCTGCTGCTATGTGTTCTCCTTGGAGCTTCTGAGGTTGTCAACGGTTCTGTTCATCAGAAGGAAA AAGTTGGGGTATTTGAGCTGAAGAAAGGTGATCTTTCTTTGAAGGTCACCAATTGGGGTGCATCAATTGTGTCCCTGGTT CTTCCTGACAAGTATGGTATGTTATGTGTACTGTATACAGATCAAAACTTCAATTAAATTTTTTTTCTGGGAAAGTTCTT AAAGCTTGCATATTTCTAAAATTTTATCTTTCTCTCTGATTTGTTTTGATCAGGAATGTTGGGTGATGTTGTTCTTGGAT ACAATTCAATTGAAGATTACAAAGTGAGTCTTTGTTCTTCCAATTACCATTTTGTGCTTTTATGTATGATTGTTGTATTT TCCAACTTTCTGTCTTTTTTTTCTTCATGTGCAAAAGACTAAACTATAAATTAAAGGAAAAGTCCTAGCTCTCATTGTTG AACAGCTTTGATTAGTCCAAACATGTGATAGCTATTAATATTTTAGTTTTGAATGATTAATTATGAATAGATACTTTCGT CGTCTATGAACTATTTTTATATCTTTTTAAAGAGCAATGATAAATTAATATGCCAAATTAATGAAGCTTTATAGTTTACC TAAGCTTTACATGTATTTTCTATAAAATTATAAATGAAATAAATATCTATAGTGAAAATTTTAACTATCCTTTTATTTGC CTTGATAAATTTCATGTTTTGATCCATTTACACTTTATCAATCTCATTCTCAGGTATTAATTTTTTTACTGTATTACTAA TATATTTATCGTATCTCTCATTTCTCCATATATTTTTTTAACAATTTATCTTGATGGAAGGTCTTAGGGAATGAATAAAC ACTTATTGATATATAAATTTTGGTTTGTTTTTGCAAAGCTATGCAACTTTTGTGTGAGATACGGTTGACGTTTACATCAT CTGCAGTCCATTAAAAGAGTCTAAAAATTTAAATGTATTTTTTGCGCTTTATATGGTTTTCATTTTTCAATGTCCTTGTC TGATGTTTCCATGTTGACATTTGTACTCATCATGCTTTAAAATACCTATCATCTTAAAGTTATATAATAAAGATCAATTT AATTATTATGCATGCACGGCCTCATTCAAATAAAATTCATTATATCATGTCATAATTATTCAAAAATATTAAGAATAAAA AATAGATGAATTTAATTGGATGCACATATAAATTTTTGTACATTGTCAGTGTAATATAAATTAAACCTATGGAGATCAAT AATTCTCTTTGATAAAATGGTTGATACATGAACATGACTAATGTAAAGTTTTTTATTCATATGTATCTAATTGATTTCTG TCATTAATATTTTTTACATTGAAAGTGTTTATCCATTAAGCTCATTATTTTTTTTATTTTGCGTTGATTTTGAACTGATA ACTATTGGTGAGCGAGTTTCTCCAAAACAGCAAATATCAGATTATGAATTCTCTATATTAATAAAAAATATTTCACATTA TTATTTCCTAATAAATATACTATAGGCCAAAGACATAAGATGAGAAAAATCTATAGTTATTAATTAATATAATTTGAAAT AATTTAAAATTTTAAAAAGGAATTATTATTTTACTTGTCTATTTTACAGTTCATTAAAATATCATGGAAAAGATGACTAA TTTAATATAGGTAAGTCAAACTATGTTGGCATGCATATGCAAACATGTGCATAGGTTCCTAGTGTAGGAAACTGGAAACT AATATATACTGTAAAAATAAACAAGGACTCGTGACTCGTGCGATCCCCGGGAATATTGTGGGCCCGGCCGCAATGATGTT CATGCCATAATAATTTGCAGTCATTATTCTCTGTTTCCATCAATAGTAACAATGGGAAAGAAAATACCAGCTCAAAGATT ATTGAACTGTAAGTCTGTAATCCAAGAGGAAACTCTAAAATGACATTAAAGAATAAACTATTACTAGTAATATATACTAA TACTAACATGAATGTAAGAAATTATGATTTCCTTATGACACATTCCAATATCACATAGTTTATCAAGAGTATCCAATGAC CACAGTTTAAAAAGGTATGACCATAATTTAAGAAGGTTATGTATCTTTTTCATCTTGTCTTGTTCACAGTAAAACTAAAA CATATTGCAATGTCCTAGCTAATTATATTGCTAAGAGGATTGTTCAATCCCATTTCCAAGTTTGGATGAAGGATTTTCCC TCAGATTTATTTTCGCTTAAATTTTGAATTTTGATGTACCACCTTTTGATTTAACCTAACAAATTAAAGTGAATATTAAC CCTAAAAAAAGGGTTACTGATCAGTTTAATCTGGAACCATTCAAGCGACTGATTTTTTTTGAAGAAAAAAATCAGGTAAT TTTGAATAGGTGAGAATTAAGAAAAAGATAAATTTTCAATAAATTTTAGAAAAAGATTCATCACCATATCTCTCTTTATG TTTGTATCTATAGCTTCTCACATATGGTAGTAAGAAGAAGATAATATAAATGATTGCAAATTTGCAATGTCAAACAATTT GCAGAATGACACATCATATTTTGGAGCCACTGTTGGCCGGATTGCTAACAGAATTGGAGGAGCTCAGTTTAATCTAAATG GAATCCATTACAAAATAGTAGCTAATGAAGGAAACAACACACTTCATGGTATGTCAAACCATAATTAATAAACCTTATTG CAAAGAGTTTGTATATATAGTCCATTTAACACTATATCTCATGTAAAATGTACTCACTTGTCCAACTTTATTAGGTGGAT CCATAGGATTTAGTGATGTTGTGTGGAAAGTTAAAAAGTATCAAAGAGATGGTGACAGTCCAAGGATTACCTTCAGTTAC CAGAGTTTTGATGGGGAAGAAGGTAAACAATGCCATTATCTTCATTTGCTTTTAGTTTAACTTTGATGCATCTATTAATT TATAGTAATAACAACTAATATCAAGACAAGGTTTAACATTCTATTTTCAATACTCTCTTATTTACGAGTTAAAATTCATG TGAGTCCAATCAAATTGTAATTGAGACTCATATTTTTAGTTTGTTCACATGAATTTCAATTAATTAACGAGAAAGTGATT GAAAGAGAGTATTAAAACGAGTGTTGCCAGCATTTTCCTTCAAGTAATTAATGATAGTCAGACACTCGATCAATATAGAC ACCTGACAGACACCACAAACTTTCTATATCTCTCTTTTCTTATCACATCACATTATTTATCACATTTATTACTTCTCTCT ATTTTCTTCCTTTCCCACTCTAAGTTTTTGTAGCGTGTCTGCATTGTGCGGATGTCTCCAAATGACCGAATCATTACCTG TTAATTTCTGACAAAGAAATAGAATTGCTGATATGCATGCATTTGCATGCTCTGATTGAATTTCAGGATTCCCTGGTGAT CTGCTAGTAACTGTGAGCTACATTCTAACTGGGAAAAGCCAATTGGTTATAATCATGAAAGCAAAAGCACTAAACAAGCC TACCCCAGTGAATCTGGCCAATCATGCTTACTGGAACCTAGGAGGTGAAAACAGTGGCAATGTTCTGAATGAGGTGGTGC AGATCTTTGGTTCCAAAATCACACTTGTTGACAGCAAACTCATTCCCACAGGAAAATTTGCCTCTGTGAAAGGAACACCA TATGATTTTCTTAATCCACACGTTGTTGGAAGCAGGATCAACAACAAAAAGCTAGCTGCAACTAAAGGTTATGACATCAA TTATGTGCTTGATGGTGAGAAAGGGAAAAAGATCAAGCTTGCAGCAAAAGTGTTTGATAAGAAATCAGGGAGAGAGTTGG TGCTTTACACAAATGCTCCTGGTGTGCAGTTTTATACTGGTAACTTCGTTCAGGATGTGAAGGGGAAAGGTGGGTTTGTG TACCAAGCTCATGCAGGGTTGTGTTTGGAGACTCAAGCTTTCCCTGATTCAGTGAATCACCCTAATTTCCCTTCAACAAT TGTGACCCCAGAAAAGCCTTACAAGCATTTGATGCTTTTTAAGTTTTCACATAATAAAGCTCTTTAAGAGCTTAAAGAGA AGTAGAACAAGGAGTTTTCTTTCCCCCATTTTCAATTTGCTAGTACCATGGAAAATAAGTGTTTCATAACTCTGGATTTC ATCTGAACTTGGGTTTATTGAAATGAATAATTTGTTACTCATCATCTTAGTCTCATTCTCTTTACTGGTGGTGGTTTGGA ATACTTCAAGTTATTTCTCTAAATAGATCCTGACACTGATTTGCTGTTTCCCATTGCTATTTGATTCTATATCTCTAGAT ATATTTCAAGTTCATATTTTTGTTGGAAAATGAGAATATTTAAAAAGTTCTTAGTCCCACTCCCACATGTAGAGAGGATT TGGGCTTGTGCACCTGTGATCAGGCGACTTTCTCTATGTGGCAGTGAAATCATTCTCCTTCACATCTTGACATCAATACA TCACATTTAGACCAGGTTGATAGTACTAAAAGTGAACTCAATAACAAAAAGAAACAGGAAGTATAAACTGCCCCATGAAG TTCATAGTATGATATTTATTCTTGAAACTTGTTACAAC
CDS sequence (LotjaGi1g1v0500600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCAAGATCCTTGTCCTGCTGCTATGTGTTCTCCTTGGAGCTTCTGAGGTTGTCAACGGTTCTGTTCATCAGAAGGA AAAAGTTGGGGTATTTGAGCTGAAGAAAGGTGATCTTTCTTTGAAGGTCACCAATTGGGGTGCATCAATTGTGTCCCTGG TTCTTCCTGACAAGTATGGAATGTTGGGTGATGTTGTTCTTGGATACAATTCAATTGAAGATTACAAAAATGACACATCA TATTTTGGAGCCACTGTTGGCCGGATTGCTAACAGAATTGGAGGAGCTCAGTTTAATCTAAATGGAATCCATTACAAAAT AGTAGCTAATGAAGGAAACAACACACTTCATGGTGGATCCATAGGATTTAGTGATGTTGTGTGGAAAGTTAAAAAGTATC AAAGAGATGGTGACAGTCCAAGGATTACCTTCAGTTACCAGAGTTTTGATGGGGAAGAAGGATTCCCTGGTGATCTGCTA GTAACTGTGAGCTACATTCTAACTGGGAAAAGCCAATTGGTTATAATCATGAAAGCAAAAGCACTAAACAAGCCTACCCC AGTGAATCTGGCCAATCATGCTTACTGGAACCTAGGAGGTGAAAACAGTGGCAATGTTCTGAATGAGGTGGTGCAGATCT TTGGTTCCAAAATCACACTTGTTGACAGCAAACTCATTCCCACAGGAAAATTTGCCTCTGTGAAAGGAACACCATATGAT TTTCTTAATCCACACGTTGTTGGAAGCAGGATCAACAACAAAAAGCTAGCTGCAACTAAAGGTTATGACATCAATTATGT GCTTGATGGTGAGAAAGGGAAAAAGATCAAGCTTGCAGCAAAAGTGTTTGATAAGAAATCAGGGAGAGAGTTGGTGCTTT ACACAAATGCTCCTGGTGTGCAGTTTTATACTGGTAACTTCGTTCAGGATGTGAAGGGGAAAGGTGGGTTTGTGTACCAA GCTCATGCAGGGTTGTGTTTGGAGACTCAAGCTTTCCCTGATTCAGTGAATCACCCTAATTTCCCTTCAACAATTGTGAC CCCAGAAAAGCCTTACAAGCATTTGATGCTTTTTAAGTTTTCACATAATAAAGCTCTTTAA
Protein sequence (LotjaGi1g1v0500600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKILVLLLCVLLGASEVVNGSVHQKEKVGVFELKKGDLSLKVTNWGASIVSLVLPDKYGMLGDVVLGYNSIEDYKNDTS YFGATVGRIANRIGGAQFNLNGIHYKIVANEGNNTLHGGSIGFSDVVWKVKKYQRDGDSPRITFSYQSFDGEEGFPGDLL VTVSYILTGKSQLVIIMKAKALNKPTPVNLANHAYWNLGGENSGNVLNEVVQIFGSKITLVDSKLIPTGKFASVKGTPYD FLNPHVVGSRINNKKLAATKGYDINYVLDGEKGKKIKLAAKVFDKKSGRELVLYTNAPGVQFYTGNFVQDVKGKGGFVYQ AHAGLCLETQAFPDSVNHPNFPSTIVTPEKPYKHLMLFKFSHNKAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
Phobius | 1 | 3 | 3 | - | – | |
SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
Phobius | 1 | 21 | 21 | - | – | |
SignalP_EUK | 1 | 21 | 21 | - | – | |
PANTHER | 2 | 363 | 362 | 7.6E-186 | – | |
PANTHER | 2 | 363 | 362 | 7.6E-186 | – | |
Phobius | 4 | 15 | 12 | - | – | |
Gene3D | 15 | 362 | 348 | 8.1E-116 | ||
PIRSF | 15 | 363 | 349 | 2.7E-116 | ||
Phobius | 16 | 21 | 6 | - | – | |
SUPERFAMILY | 22 | 361 | 340 | 8.79E-110 | ||
Phobius | 22 | 366 | 345 | - | – | |
CDD | 32 | 360 | 329 | 6.34934E-158 | – | |
Pfam | 32 | 358 | 327 | 4.0E-87 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
Molecular function | Isomerase activity | Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5. | ||
Biological process | Hexose metabolic process | The chemical reactions and pathways involving a hexose, any monosaccharide with a chain of six carbon atoms in the molecule. | ||
Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi1g1v0500600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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