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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0502300 |
| Transcript ID | LotjaGi1g1v0502300.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 60S ribosomal protein L34; TAIR: AT5G39785.1 hypothetical protein (DUF1666); Swiss-Prot: sp|Q8K385|FRRS1_MOUSE Ferric-chelate reductase 1; TrEMBL-Plants: tr|K7MUS9|K7MUS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0502300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101922053..101928576) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTGTTATCGTTTTGTCAGTCGACACCAATGAATGATATAAAAGAGAAGGCACAACAACATTCCCATTGATTCATTCT CCTGATGGAAAAATTGCAAAATCCCCACGAGTCTATCTCATAACGGTACACAGAACACAACAGAATCCCATGGTTCTACG CAACCGAAAGATTAGCTCAAACACAAGTTGCTGACATGTTCTTTTCCTCACACATGTTTATGTTTTTTCTTTTCTTGATT TTCCATTCAATTTCCCTCATCAATTAGGTAACACTTCACCCTCTTGCTGAATCAGATTCACCCTGTGATAACTCTAGGGT TGTACCTATATCCTTGTCTTTCAAGGTGCAAAGTCTCAATCCTTTTTGTAAAATTTTCAAAGTACAAATCAGAGTTTGCA TGACCCTGCTCTGTTTTTTCTTCCTCTGTTTTGCTTCAAAAGGAATGGGTTCAGTTCTAAAGTGCCTTCAAGATGTTTGT GTAAATTACCCTCTTGGTTTTTAGTGAGTATGGGTTCTCAGAAAGGTTTTTTCCATAGAAAGATGGAAATTTTTTCTGGG TATTTTGGGGTGTTTCTTTGGGTTTTCACCAAAGTGTTCATGAGGTATTGAATTTTCTTCCATTACAAATTTGAATACAC TGTTCAATACCTATTCTTTACCTTCATCTATTTTTTGTTTTCTTTTTATTGTTTCAGATTCTATAGCCCTGAAGCAATGA ACTCTGTTTGTTCTTCTAAATTTTCCCATGAAAATCAACTAATTGAGTTGAATCATTCTGAGCCAAAAACTGAGGATGAA GCTGGATTTTCTGATTCTTCCAGAGATACCTTATTGGAGTCTGAAAATTCTGGGGCATTTTCTGATGCTCTATCACATGA AAGTAATGAAATTGAGTCTAATGGGTGCCAGCCAATGGCAGAAGCCATGAAAGATTGTTGTTCTGAAACTGCTATTGATG GTAGCGGGAATCCTGGCCTTGAAGAAGAGGAGACAAGTAAGCTGGTTTTCAAGTTCCAATACCAGAGTTGGAATTGCAAC TTCAATGAAGAACTCAAGGGAGATTATCATGAAAGTAGTGATTTTGTGGAGAGGGATACTGTTTCTGCAAGTGCCAACAA GTATGAGTTTTTCTCTGGCAAGAGTTTTAGCCACTTCTTGGAAGAACCTGAGACTGCAAATTTGACTGTTGAAGAGTTTC ATGTTCATTCAAATGATGAGTTTCCATTGGAGAATCAGGTTACCAATGATTCTGAGGGTAAACTCATGCCAGAAAATTGT GAAGGGGTTGTTGATGCAGAAAATCATGACAATGTCACAGAAAGTGTACACAAAGAGGAGGTGTCATTAGAGAAGCTCAA GACTGTGTTATCTGTAGAACAACAATCTTTGCAACCTGTTACGCGTAATTTTCTTTCAGAAGATGATTTTATTTGTTCAA GTTCTGATTCAGATTCTGTCACTTCTATGGATGATGGGTTTTTATCAGACACGGACTTTGGAACCACTACTGAGATTGAC ACATTGGGAAACAATGAAGAAGAAAATGCAGGGCTAACAGAAGAAGATTTGGACTTTTGGGATGAGAATTTGGATATTGG ATATGAACCTGATGATTTTGCTGAAGAAGATGAAGATATAATGGAAGAATTAGGAAAAATAGAAGAAGAGTGTAGGCTTG AGAAATCTTCAGGGGACAGTTTTCAAGATAGCATCAAGTCCAAACCTGAAAATTCTGTGGAACCCAATTCACTGAATTTA ACAGCTAATGATCTTGAGGATTCTAACCGGTTTGACACACTGTGGGAGCATCAAGATTTGATAGAACAGCTCAAGATGGA GCTGAAGAAGGTTAGGGCAACTGGTTTACCTACCATCCTTGAGGATTCTGAGTCTCCAAGGATAATGGAGGATTTGAAGC CATGGAAAATTGATGAAAAATTCCAGCATGGCAGTACCAAAAATGAGCTTCCAAAATTCTACAAGAGTTACAGAGAACGA ATGCGGAAATTCGATATCTTGAATTACCAGAAGATGTATGCTTTAGGTGTGTTTTCTACTCTTTACCTTAAATTTATTTT AATTTCTAAAGCAACTTTGTTTTCAAAATTTTCTGATTTACTGCCTTGTTCAAAGTGAGTGTGCTTCATCTAATAACATG TTTGGATTTGTTTGTTTCCTTGGAATCAATTCTTTAACCCAGAAGCTACTCACAGTAGTTTCTCTTTAGGATTAATTCAA TTGTAAAAGTATTTCCGAATATGCGCAAAACCATTAGAACTAGAAAGGTAATTAGGGACCCACTAAATCTGGTTAGCTTG GGCACAGGGAAAGCATGAATTACCCAATATCTTCAGGCACAAGAATGAATTTTGAGACAATTAATACATTTATTTTTGTC TCTTTTTCTAGGTGAATTGTTTTGGGTAGGGGGTACTCACCTTCAGTGCTATTTTGTTATTGAAAGAAAGTGAAGTTGAA TTGGGGGTTGGGCATTAAGAGATTGAGCAGCTTTTTACACCACATGTTGGTTCTGCACATTGCATAACATAAATGCTAAT ACTCCATACCAGATTCCAGCTAGCCTTGATTGCTAGTAGTAGTATTCTGTAATCTGTATGCATTTTTCCCAAAGACTGCC ATAGTTAGTGTTAGGACTCTTTCATTGTGCATTTTTCTTGGAAGGAGTCATTGTTTTACTAAAGCTACCCACAGTTTCTT ATTGTGGCTAGCCTTGCCTAATTTCCCAAAGAAATCAGTCCCTACAATGACCTAGCACTTATTGTAATGCTCCACCAAAT TTTTATATGACCTTTTCCTGTCTTTTTAAGCTAAACAACTCCTACCATGCAACACATGTTTCTTTTGGGATCTGAATTAC TTCAAGTCGAGGAAACCTAAAATCTCTGCAGGAAGGGATCTAAAACATTCAAACTTAAATAGTTGAACTATAAACTACAC CAAATCTCTGCAGGAAGGGATCTAAAACATTCAAACCTAAAATCTCTGCAGGAAGGTGTACTGTTCAGACTGCAGTAAAT TTAGGATTCCCTTACAGGGAAAAAAAACCATATTCCCTTGAAAGCAATCTCCACAAAAGTTATGTTATTGATGCTATTAG TGTGATGAGGATACTAATTACTACTAGCATAGGATCCATAATCAATTCTAGCACCTAGAAACTACTCTTGATTTTGGCTT TATAAAAAAATTGTCCATGTTAAATTATAAAATAAAATTGACCATGTTAAGGTTCGCCAACTAACTATTCATTTAATTTA ATTTAACTTCTTTATTATTAAACACACGACCAATGGTTCAATGGTGAAACTTGACACAAGGAATGCTAGCAATACACTCT TTGTGATTGGTTTATTTTTTGAAAAATTAACACATTTTTTCTCACTACCAATATCTGTGTTGAAATCTATTTTTAAAAAG AGTGTTGCTAGCAATTTTCAGTTGATGTAGTCAAGTTTTTTTCCAATTCACAGAGCAGTTTATTGTACTCGTTAGCATTT TCTAATATATTTTTATTATTGTTGAAGTGACTATTACATTATGCTTAACTTTTAAGTCTCCAATCATAGTCACAAAATTG TCCTTTGAAGTTTCTTGGAAACTTGCAGGTTTCCTACAGTCAAAGGACCCACTCCAATCCTTTTCAACTCACAAGAGCCC TTCTCCACCAATCACAAGCATTCTCCCTCTTCCACGCGGCTTTCACATTTACAGACGTAGAAAAATTGAAGCAGCTCATG ACCCCACGAAGAAGTTCATGAGAGAATTGTACTGTGACTTGGAAACGGTTTATGTGGGACACTTGTGCCTTTCTTGGGAA TTTCTTCAGTGGGAATATGGAAAGGCATTGGAATTATGGGAATCTGACGGGTACGGTATGAGAAGGTTCAATGAAGTAGC TGGAGAGTTTCAACAGTTCCAAGTGCTTCTACAAAGATTTATGGAGAATGAACTTTTCCAGTGTCCGAGGGTTGAAAATT ATGCTAGGAATCGTTGTGCCATGAAGAATCTTCTTCAAGTTCCAGTAATAAGAGGTGAGAACATTTAATTGAGAAACAAT GTAGTCTTATATCTTTTGATAATCTATATAGCTGGACTAAAATACTCTTAGAGAGAATGATACAATTGGTGGAGTAATTT ATGAGGATTATAATTAGTGAAAATAAGAGGTGTTAGGTGAGAGATATTGTTAATACCTCTATATATGGCAAAAACAATAA GTTTAGGGTTCACACTTTATTCACACCTACACTAGAGAAGGAAAATGAGAAATGATAAAGAATTGAGAGATATAATAGAG TGATGTGATAGGAAAAGAAGAGAGTTGGAAAGAGAAAGTGAGTGAAAATGAGATGAAAGATAGTAAGGAGAGTGCGAATG AATCAATACTCTGGCAAAAAATAGATAAATCATCCCAAATTTCTAAAACAATAAAAGTGCTGAAAAAAAGAGGGGGGAAC TAGTGGATGTTAGGTTTTAAAGTTTAGACATAAGTTAAGATATGTTTACTTTCTAGCTTCTAATCAGAAGTGATTCTTGA ACATTTCAATTTGGAACCAAACATGCTAGTAAATTTAATTGTAGTTTTTCAACTTCTCTCAAAGGGTGTCTGTCCTAGAT GGACGAATAATAATTTTGTTTATAAAAATTCAAGCATAGAATTTTTTGTAATTCCCAACATACTTATTTTAATTATATTG GTCTATCCATAATGAAATTATTTAGCACTTCTTAAACTAAGGTACACAGATTGTGTTTGGTTTCCATTTGAAAGCATATT CAATGAGATATTTGACTTATTGGATTGAGAAAAAGCAATTCACACCTAATCTAATATATAAACAAACACATTAAATTTGG TTAGTGTCTTTTTTTTTCAAATGGAAATGAGAGGTTACTTTTATTGTACTCCACTTTGTTAGGGTCCTTTTGAACTATGT GGGGGGACCAACTATGTAAAGTTTCATAGATGAGCCAAAACAGTTCCTCATGGTTGTAGAAGTTAACTTAAATAATTGTC TGCAGAAGACAACGCCAAGGATAAAAAGAAGTACAGAGAAAGAGAGGCTGATAAGGATGCCATCACAAGCGGCATGCTAG TAGAAGTTTTGGAAGAATCAATCAGAACAATTTGGCGTTTTATAAGAGCCGATAAAGATGCATCTAGCTTGAAAGGTGCA AGAGAAAAGCAAGTAGAGCTACAAGACCCTTCAGATTCTGAACTTCTAGTGGAGATTCGAACAGAGCTTGAAAAGGTAAA CCTCTTCAAAAGTCATATTTTTAAATGTCAAATGTGAATCAACTTTCTTTTGCTTTTTGAGAAAAGGTTGTGTTTTGAAA TATAGAAAGCATAGATATCTCATCTCATAAACTTCGTATAACTAATTAAATGCACAATATATGGCAAATATTAAAAATTG TAGGAGATACAACAAGTAAAATTAATATATAATTCATATGCTAATATAAATTTTAGATCAGAAGACAAAATTGATATTTT TGAAGAGGTTTTCTTACTTAACCCGAGGGTTAAACAATCGTATCTTAGACAAAATTGATATTTTTGAAGAGGTTTTCTTA CTTAACCCGAGAGTTAAACAATCGTATCTTAGGTGAATCAATGATTGTTTTTATAGAAGTTTTATTAAAAAAGTTTGATA CAATTTTCAATAGACACTTACTAATATGCCCTTAGGCACGGCCATACGCAGTATAGAAATCACATTTGGATTCGCGATCA ATTTCTAGGTTTTGCCGTAAATCTAATTGGTTACTTCGAAGTACAATAAACAAATAGCTATAATACCTGTCAAAGGTTAG CATGAGATATTTAAAACATAATAAAATGTTGTCGCATGACTAAATATTGCAATATGTATATCTGTAATTCTGTATTTCTA AAAGAACTCAAGTTGAAAAAACATGTAAGTAATATGATTAGAAGTCTACCACACAAATGTTATTTGATATGAGTGCGACA TCACACGACAACTATTTCTAAGTGTTCATGTCATTCTTACTTTTATTCTCTATAATGTTATATATTGTTTTGATTTGCAG AAGGAAAAGAGACTGAGAGAGCTTCTGAGGAGTGGATGCTGCATATTGAAGAAGTTCCAAAAGCACCATGAAGATGGGAC GGATCAAGTGCTTTACTTCTTCTCTCAAGTGGATATGAAATTGGTTTGGAGAGTGTTGAACATGTCAAGGATAACAACGG ATCAACTAGCATGGTGTCGTAGTAAATTAAACAAGATCAATTTTGTAAACAGAAGGATACAAGTAGAACCATCATTCTTA CTTTTTCCTAGTTAGTAGTCAATTACAAGCTTAGTACATAGGCTTTAGAATGTCATTATCGAAATAGAAAAGAAAATTTT CATACAGCCATAGTATCTTTTTAGATGATTATATGAATTTAAAACGAATTGAATTGAATTCATTGCAAGTGTCATATAAT TCTCCTTTATTTTATCTTGAATGAAAGAAAAAATAGCAATTTAT
CDS sequence (LotjaGi1g1v0502300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCTCAGAAAGGTTTTTTCCATAGAAAGATGGAAATTTTTTCTGGGTATTTTGGGGTGTTTCTTTGGGTTTTCAC CAAAGTGTTCATGAGATTCTATAGCCCTGAAGCAATGAACTCTGTTTGTTCTTCTAAATTTTCCCATGAAAATCAACTAA TTGAGTTGAATCATTCTGAGCCAAAAACTGAGGATGAAGCTGGATTTTCTGATTCTTCCAGAGATACCTTATTGGAGTCT GAAAATTCTGGGGCATTTTCTGATGCTCTATCACATGAAAGTAATGAAATTGAGTCTAATGGGTGCCAGCCAATGGCAGA AGCCATGAAAGATTGTTGTTCTGAAACTGCTATTGATGGTAGCGGGAATCCTGGCCTTGAAGAAGAGGAGACAAGTAAGC TGGTTTTCAAGTTCCAATACCAGAGTTGGAATTGCAACTTCAATGAAGAACTCAAGGGAGATTATCATGAAAGTAGTGAT TTTGTGGAGAGGGATACTGTTTCTGCAAGTGCCAACAAGTATGAGTTTTTCTCTGGCAAGAGTTTTAGCCACTTCTTGGA AGAACCTGAGACTGCAAATTTGACTGTTGAAGAGTTTCATGTTCATTCAAATGATGAGTTTCCATTGGAGAATCAGGTTA CCAATGATTCTGAGGGTAAACTCATGCCAGAAAATTGTGAAGGGGTTGTTGATGCAGAAAATCATGACAATGTCACAGAA AGTGTACACAAAGAGGAGGTGTCATTAGAGAAGCTCAAGACTGTGTTATCTGTAGAACAACAATCTTTGCAACCTGTTAC GCGTAATTTTCTTTCAGAAGATGATTTTATTTGTTCAAGTTCTGATTCAGATTCTGTCACTTCTATGGATGATGGGTTTT TATCAGACACGGACTTTGGAACCACTACTGAGATTGACACATTGGGAAACAATGAAGAAGAAAATGCAGGGCTAACAGAA GAAGATTTGGACTTTTGGGATGAGAATTTGGATATTGGATATGAACCTGATGATTTTGCTGAAGAAGATGAAGATATAAT GGAAGAATTAGGAAAAATAGAAGAAGAGTGTAGGCTTGAGAAATCTTCAGGGGACAGTTTTCAAGATAGCATCAAGTCCA AACCTGAAAATTCTGTGGAACCCAATTCACTGAATTTAACAGCTAATGATCTTGAGGATTCTAACCGGTTTGACACACTG TGGGAGCATCAAGATTTGATAGAACAGCTCAAGATGGAGCTGAAGAAGGTTAGGGCAACTGGTTTACCTACCATCCTTGA GGATTCTGAGTCTCCAAGGATAATGGAGGATTTGAAGCCATGGAAAATTGATGAAAAATTCCAGCATGGCAGTACCAAAA ATGAGCTTCCAAAATTCTACAAGAGTTACAGAGAACGAATGCGGAAATTCGATATCTTGAATTACCAGAAGATGTATGCT TTAGGTTTCCTACAGTCAAAGGACCCACTCCAATCCTTTTCAACTCACAAGAGCCCTTCTCCACCAATCACAAGCATTCT CCCTCTTCCACGCGGCTTTCACATTTACAGACGTAGAAAAATTGAAGCAGCTCATGACCCCACGAAGAAGTTCATGAGAG AATTGTACTGTGACTTGGAAACGGTTTATGTGGGACACTTGTGCCTTTCTTGGGAATTTCTTCAGTGGGAATATGGAAAG GCATTGGAATTATGGGAATCTGACGGGTACGGTATGAGAAGGTTCAATGAAGTAGCTGGAGAGTTTCAACAGTTCCAAGT GCTTCTACAAAGATTTATGGAGAATGAACTTTTCCAGTGTCCGAGGGTTGAAAATTATGCTAGGAATCGTTGTGCCATGA AGAATCTTCTTCAAGTTCCAGTAATAAGAGAAGACAACGCCAAGGATAAAAAGAAGTACAGAGAAAGAGAGGCTGATAAG GATGCCATCACAAGCGGCATGCTAGTAGAAGTTTTGGAAGAATCAATCAGAACAATTTGGCGTTTTATAAGAGCCGATAA AGATGCATCTAGCTTGAAAGGTGCAAGAGAAAAGCAAGTAGAGCTACAAGACCCTTCAGATTCTGAACTTCTAGTGGAGA TTCGAACAGAGCTTGAAAAGAAGGAAAAGAGACTGAGAGAGCTTCTGAGGAGTGGATGCTGCATATTGAAGAAGTTCCAA AAGCACCATGAAGATGGGACGGATCAAGTGCTTTACTTCTTCTCTCAAGTGGATATGAAATTGGTTTGGAGAGTGTTGAA CATGTCAAGGATAACAACGGATCAACTAGCATGGTGTCGTAGTAAATTAAACAAGATCAATTTTGTAAACAGAAGGATAC AAGTAGAACCATCATTCTTACTTTTTCCTAGTTAG
Protein sequence (LotjaGi1g1v0502300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSQKGFFHRKMEIFSGYFGVFLWVFTKVFMRFYSPEAMNSVCSSKFSHENQLIELNHSEPKTEDEAGFSDSSRDTLLES ENSGAFSDALSHESNEIESNGCQPMAEAMKDCCSETAIDGSGNPGLEEEETSKLVFKFQYQSWNCNFNEELKGDYHESSD FVERDTVSASANKYEFFSGKSFSHFLEEPETANLTVEEFHVHSNDEFPLENQVTNDSEGKLMPENCEGVVDAENHDNVTE SVHKEEVSLEKLKTVLSVEQQSLQPVTRNFLSEDDFICSSSDSDSVTSMDDGFLSDTDFGTTTEIDTLGNNEEENAGLTE EDLDFWDENLDIGYEPDDFAEEDEDIMEELGKIEEECRLEKSSGDSFQDSIKSKPENSVEPNSLNLTANDLEDSNRFDTL WEHQDLIEQLKMELKKVRATGLPTILEDSESPRIMEDLKPWKIDEKFQHGSTKNELPKFYKSYRERMRKFDILNYQKMYA LGFLQSKDPLQSFSTHKSPSPPITSILPLPRGFHIYRRRKIEAAHDPTKKFMRELYCDLETVYVGHLCLSWEFLQWEYGK ALELWESDGYGMRRFNEVAGEFQQFQVLLQRFMENELFQCPRVENYARNRCAMKNLLQVPVIREDNAKDKKKYREREADK DAITSGMLVEVLEESIRTIWRFIRADKDASSLKGAREKQVELQDPSDSELLVEIRTELEKKEKRLRELLRSGCCILKKFQ KHHEDGTDQVLYFFSQVDMKLVWRVLNMSRITTDQLAWCRSKLNKINFVNRRIQVEPSFLLFPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 34 | 23 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| PANTHER | 34 | 784 | 751 | 5.1E-256 | – | |
| PANTHER | 34 | 784 | 751 | 5.1E-256 | – | |
| Phobius | 35 | 784 | 750 | - | – | |
| MobiDBLite | 358 | 384 | 27 | - | – | |
| MobiDBLite | 368 | 384 | 17 | - | – | |
| Coils | 400 | 420 | 21 | - | – | |
| Pfam | 538 | 783 | 246 | 1.3E-94 | ||
| Coils | 691 | 711 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0502300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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