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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0506200 |
Transcript ID | LotjaGi1g1v0506200.2 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | ERD (Early-responsive to dehydration stress) family protein; TAIR: AT3G01100.1 hypothetical protein 1; Swiss-Prot: sp|Q8GUH7|CSCLC_ARATH CSC1-like protein HYP1; TrEMBL-Plants: tr|A0A1J7HWT6|A0A1J7HWT6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0506200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:102438174..102449759) extracted from Lotus japonicus Gifu genome v1.2.
CAAACAGGGTCAATCCAGTAAGTACTGCAGTGTGTGTGTGTGTGTGAAGGACTGAAATACCTATGTTTCTTCCCAATGAG GAATGTGAGATCAAATTTAACCTGATTAAAATCTCGAAGAATGAGGAAAGTATTGAAGAAAGAATAGTAAGTTTAAAGAC AGAGAGTCCAAGGCCCAGACCCTTTATCATTTTCTGAAGAAAACTGAATAGACAATTGAAGCAATAAGAGACCCTAAATT TAAGTTTCTCCATCACCTAGGCTCAAGGAAAAATTAGAATCTTGGAGGTGAAATTGTACTTATTAAAGGAAGGTAGATAT ATACATAATGTACTCATCCCAATTCCCAATATAAAGGTTGAGTATTTTGCATCCATTTCCTGCATATCACTCACCTATTT TGTTCAAGACCATACCTATTCTTTATTTCCGTCTTCTAAAGAGACCAGGGCAAGCTCTGTGATTTTTTTTAGTTGGTCTT ACATGTTAATGATACTTTACCCAAGCCTTAAAAAATTTCTTTACAAGTTACATGAAACACAGATTCTGAGATGTCCACGG AAAATTTAGTGCTTATTGTCTGAGATGATAAGAAGCAACATTCTCATAAAGATGTTTGTCAGTAAGGCCATATCAAATAT GTTGAGTGGTAGTGTCCTCACTCCTGAGCTAAGGCTGAACCTTAAAAAACTTTTAACAATTTTCAAATCCTCATGCTCGT TCTTTTTTGTAAGGACTGCGCAAAGGAGGAAGGTCGTGTCAGGCTTTCGGCAGCCAACGTAAAACTGACTGATATCTTTA ATATGGATCAGGGATTCATATAGCCAACCTCACTTAGTGGGATAGTGTTTTTGTTGTTGTTTCATATAGAAGAAATGCGT TAAGACAAAGAGAAGATGATTACAAAAAGTTATGACTATAAGAATTGTTCCTCAAAATAAAAAGGAAACAAACAACCAAG AAAAAGAAAATGTGCTACTCAAGTAACTCAACCAATGAACATATCCATATGGGAAACCTCTTTAAAAAGATCATGCTCTT CACACCAAGTAGAAGCCATAGTCATCATCCTACTGCTGCAATCATTCTTGCTAAACTGGAACATTATTTAGCATTAGCTT TTACATCATACATGTTAATTTCAAATATTTTTATATGAAATCTGTCCCCGATCACCTCGTATTAATGGTGTATAGCTTAT TCATATTCAACTCTTGATAGTTCCAGCTCATTTGATTTCAGGACTGCAGTTGTGTTATCGGGCGTGCAGAGTCGATCTAC TGGTTTTGAACCAGATTTCAATAATGATTTTGGCTGCTCTTCTAACTTCAGTTGGAATTAATCTTGGCCTATGTTTTATA TTCTTGACCCTGTACTCCATATTAAGGAAGCAGCCCGGTAATATTGCTGTCTATGCACCGCTCCTAATTTCTGAAGGAAA ACATCAAGAGGGTCATCATTTTAACTTGGAAAGTCTGTTACCTACTGCTGGTTGGGTGAGAAGAGCATGGGAGCCCTCTG AAGACGAATTTTTATCAACTGCGGGATTAGATGCTTTTGTCTTCATGCGTATCTTTGTCTTCAGGTGATTTATAGTATTC AATTGATTCAAGATTTAAAGTATAATGTCATTTCTTGTTAAACTCAATACATTCTATTAGTTATCCAAGCCTCTTTACTT CTCATTTTGACAGTTATTTCTGAATTATGTGTATCAAGGATATAGGTTTCTTCAAGTTCATATATATTTACATATGCAAA TCTGCAGAGGTGGTTTCTGCATTAGAAGGACTTCCTTTGTTATTGGACTTGGTTTTACACTATTGTAAATACAATGTATA TTCATTTGTTAACTTGGATTGGATTTTAATTTTTTATCAATATGATATGATGTAATATATCAGAAGGGGAGCCTTGGTGC AACGATAAAAAGTTGTCATGTGAGTGAGGTCATGGGTGTAAGTCCCGGAAACAACCTCTTGTGTATAAAACAAGGTAATG ATGCGTACAATAAACTAAGTGGGCAGACCCCTTCAAGGACCCTGCTCATGCAGGAGCTTTGTGCACCGGGCTTCCCTTTT ATGATGCATTACATCCAACTCCGCCGATGCTATGTCATAGTCAGTCCTAAGCCCGGATAAAGGAGGAAGGTTATGCTAGG TTTGCGGCAGCCAATGTAAAACTGACTGTATTGTTAATATGGATCAAGTGATTCGCAATTTCATATAGTTGACCTCACTT AGTGGGATAAGGCTTTTGTTGAAGTTGTTGTTGTTTTATGATGTAATATATCCATCTGTAACCCCTGACTACTTTTCTAC CTGCATTTCTTTAAAATATTTTATGGGCTTTCTATTTTCTGTCACCTTGTTTGTTGTTTGAAGGGCTAGGGCTAACTTAT TTTCTTTAGCTGATATTTTTCCTCTCTTTGTAATATTGTGCAGTTTAAAAGTATTTACTTTTGGTTCAATAGTTGGTATA TTCTTTCTGCTTCCAATTAACTATATGGGGACTCAGCTTCGTGATAACTCTGATTTTCAAAAGAAGTCTCTGGATGCCTT CAGCATTTCTAACGTGAACAATGGCTCAAACAGGTGAACATTATCGATCAAGATGGTCTTAACTCTTGAGGCATTATTTA TTCATGACAAAGATCAATATTTAATTCATATCTGGAACATTAATTTATTGGTTCTATTGCTATTTAGTTTGGAAAGTCTC ATTTTCTTTAATTGATGAATCAGCTTTTGATTTGTGATGTCTTTGTTATGTTTATATTATTTGTTGGGATATGTTTTTTG ATGATTAGAACTGAAGAAAACCAACATATGTCATCTCTTTGTTCCTCCTATAAATGGAAGATGAAGTTTTGATAACTAGG CTGATTTTAAGTACTTATTTCCTTCTCCAAATTATACATGTTCATCCTAACATTTATGACAAGATTTTATTTGTTTGCTG TTGTAATTTCACAACTCATTTGAATGAACATTGTCATGAGTATTCTTGAAATTTGATTCTTTTTACTTAATTTTTATCTA AGTCATGGGAACTCTGATCGCTAGATTTGGCCTTTCTCAAGGTTATGGATCCATTTTTGCGCTGCATATGTTTTCACGGG AGGTGTTTGCATTCTTCTTTATCATGTAAGTTATTATTGTTCATGTTTGATTTATACTACATACGGTCTGATTTTGCCTG TTCTGTCAAACTATAAGATAGTGATTTCATGCTTTATGTTAATATCATATTCAGGAGTATGCATATATTTCATCAAAAAG AATTGCTTGCTTTTATTCATCCAAGCCGGAGCCTCATCAATTTACTATATTAGTACGGGGTATTCCTGTTCCGCTGGGAA GCACTTGTAATGATGCGGTTGAGCGCTTCTTTCTGGAGTATCACCCTTCTACTTATCTTTCGCATTCGGTTGTCCGTCGA AGCAGCAAACTTCAAATTCTAACTGTAAGCAATTTTCTGTAGTTATAAGTGATTCAATTTAATCCTGTTTTTTCAGTAAA AGCTTAATCTTCTAGGTTCACTGATCTTTAGACAGGTTTTTTCATAAATAGCATAGTTATCTCTTTCTTTTAAAGAAGAT TGCACATTAACACGTTACGTTATTTTTCTGTAAGAATTCTCTTTTTGGAGGCTGAGAGATGTTGGTGATTAGGGTTAGCA TCAGTCACTGTCTCACTGCATGTCTTCGTGAAGTTTTGAACTTATTAGAAACATACAGTTGTACTAACTTTAGTTTTTTC TTTCAATATTAAGACCCTGTTTGGAAGAGCTTATCTTATAGCATATGCTATTATGCAAGTGTTTGGTAGAGCTTGTGTAA ATAGCTTATGACCTACCGATAAGCTGTTTTGACTTTTTTTCATAAGTGCTTCAGATTAGCTTATGAATAAGAGCTTATGC TTACCTTTAACTTATTTTCAATTTATTTTAATAAGTATCTCAAATTAGCTTATGAATAAGGGTTTATGCAATAAACGCTT AATTAAGATGTTTATCCAAATGCACCCTGACTATATTGTGTTTTTGACTATGCAAATCTCAATCCTTGTAGACTGATGCA GAGAGACTCTACAAAAGGCTTACCAAACTGAAACATAAAGATAACACAACTTCCAGACATAGGCGTGATGGATGTTTTGG ACTTTTTGGACATAAAGTTGATACTCTAGATCATTATGAAAAAACATTGGGAGACATTGCTGATAATGTGAGAATAGAAC AGTCTTCAATGTCATTGGGAGGAAAGGTAACTATCATGTTCTAGGCATGAATAACCTTCAAGACTTTTGAGTGATAATTA ATTGTATTTCCCCTAAGGCTGTTTTAATAACTGGTCTGGTAAGGTTTACACCCTATCTAACACCACAGCAAAATATTCAG ATTATCATTTTGAACTGAATTTTTTCTGTTTTGTTAGAAAATTATGCTTGATTTACTGTCAGTTTCTCCAACTTAAACCA ATAAAGACAACTTAGGCCCTGTTTGGATGATCTTATCTTATAGCATAACCGCTTGTGCAAGTGCTTGAGAGAGCTTATGC AAATAGCTCATGACCTACTTATAAGCTGTTTTGAGCTTATTTTCTTAAGTTGTTCATATTAACTTATGAATAAGAGTTTA TGTTTTCACATTATCTATTTCCAGCCTATTTTAGTAAGTTCTTCAAATTGGTTTATGGATAAGCGCTTATTTCTGTAAGA GCTTAATCAAGTTGTTTACCCAATTGCACCCTTAGAGTACTCAAGCTTGGTTTTGATTTTAAATAACCTTCATCTTCTGC ATCAAATTTTCTGTTGACTACTAGAATTGGATTATGAAACGTTTTTGTAATCCTAAAGTACATGTAGTTTTTTTATGGTT AAGTTGAATATCTAATACATCCACTTGTTTAATTACCACTTTCACTTCAAAAGGAAGTCCCAGCTGCTTTTGTCTCATTT AAGTCACGATTTGGTGCTGCAATAGCTTTAAACATTCAAGAAGGTGTCAATCCTACAGACTGGATTACTGAGCAAGCTCC AGAGCCTCATGATGTTTATTGGCCTTTCTTTTCTGTCACGTTCATCAAAAGATGGATCAGCAAGCTGGTGGCTTTTGTTG CTTGCAATGCTCTTACAATTCTATTTTTGATCCCAGTTGCATTAGTACAAGGTCTTACCCATCTTGATCAGTTGGAAACC ATGTTCCCATCTCTAAGAGGCATACTAAGACTGTAAGTTGGAAATATTATCTGTTGAATCTTAGCTTCATGTGCTGCATG CTTAGATCAGCTTCTTTTTCATCAAAACCAATTCAGGCACTCAGAAGATACTGACATAAACTTTTCCCCATAATTGATTT TTGTTTTGTAAAAGGATTTCCAAACATGTACAAAGAATGCTAGAAGTCAGATTAATATATAAAGTATAAACATGTGTTGA TTTGCATTACATGTGAAAAGAGAATTGTTTGTCAGCCCATATTTCAGTATAACATGAGAATACAATTTTTTCTAGTATTC TTCACGGCTTTGTGCTCGCGGCTTTTTCCACTGGTTTTTTCAAAGGGACTAGTCTTAGAATTTAGGTTAGTTCTAACTCT ATCCTAAAATCTAGGTCAGGGATGAGGATTGCTCTACCCTATATATAGACTTATTTGCCCATATAGCCAATATGGGATCT TAACTCATCCCTTTACACCCAGAGTTGAACATCTGGAGCGTGAAATTGTCAGGGATGGACATCTGCACCGGATGACCCAT ATATGCGTGGTCTCCAATAAAAGGGTCTAGGATTGACAATGATGCCATCTTACAATTCAGGGTAGGCCTAATTCTACCAC AAAACCTAGCTCACGGGTGAGGATTGCTCAACCTTATATATGGATTTTTTTGGCCATATCTCTAGTCATTGTGGGACCTT AACAATTAGAACTCTCTCTTTGGTTGTGGAAAGTATAGCTTTTCCCTGTGTTTCTTGCTTGCAAGTTGAAAGTGTAGCTT GTTTAAACAGAAGCACTAACACCCTTTCCATGGATTTGCAACTAAAGTAGAGTTTTCCTACATTTATTGCAGGGCAGTTG TGAGCCAAGTTATAACAGGATACCTTCCGATTCAGATTCTTCAAGTGTTTCTATCCTTTGTGCCACCTATTATGATTATG CTTTCATCCTTGCAAGGACACATCTCATGGAGTCAGATACAAAAAAGTGCGTGCAGTAAAGTATTATGGTTTACCATTTG GAACATTTTCTTTGCAAATGTACTATCAGGGTCAGCTCTCTATCGATTGAATTACTTTCTTGAACCCAAAGAGTTCCCCA GAGTACTAGCTGAAGCCGTGCCGGTACAGGTTAGAATATTTGCTGAAGGTTTACAAATTTCTCTAATATTTGCTAAAGGT TTTACCATATTGAGAGGGAGGGAATACATTTTCTCATTTTGTTGGTGCTATGAGGAAAATGACACATGTTGCTATTTTCT TATCTATACATGTGGTCAACTGGTCATTCATGTATTGTTTCTTGTATGGTTTATTGATATTGTGTAATATACATAGGATG TGAGATTGATAGAATCTAGGGTTCTAAAGTAGTGAGCGAAAGAGAAAATGAGAAAGAAAACTGAATATGAGATGATTTTC ATTCATGCTCATCAATGTAGATCACTATGATATATAGGCAGGTGAGCTCCTCTAACAGCCTCTAAAAATAGTATCTAACT ATAAACATAATACAATTAACTATAACAAACTCAACTGAATGTAAACAACTAACTTAGCTAGCTTTAGCCTCCAGAAGCAG CCCTAGTATATCTCTTTACAAAGATGCTTTTGCTTATGCACTATATATATTTTCCAGATGCTTTGGAAAAATCATTTGTT TCATGACATTTATTCTCATTTTCTGTAATAGTGGATGAGAATAAGACAGATTGAAGGAGTTGCAGTTCCCATATCATTTT AAGTATTTATATCTGATGTAGTGTATATTTATATAAAATGTAAAAAAAAAAAATTAGCACAGTGGCCATCCTGCTATTCC CTATACAACTACAGTGTTTTCATGATCAGCCGCTATGCGTCACTATGTGGGATTGACGACACTTCCCTCTATATCTCTTT TATCTACTGATACATTGCAATACATATTTACTTGCAGGCAACATCTTCTATTTTATGCATAAGATATTATCCCATGAATT GGATGATATGCATTTGATATCTTTATACTTTGTATTTGGTGCAGGCGTCATTCTTCATTGCATATGTTGTGACATTCGGA TGGACTAACATAGCATCTGAACTCTTTCAATTGATTCCACTTGCTTACAATTATATAAATAGAACTTTTATTGGAGATGG TGATGATGATTTTGAGGCACCATCAATTCCTTACCACAGCGAAATTCCCAGGATTCTTTTCTTTGGTCTTCTTGGTGTAA CATACGTCATCCTTGCTCCTCTGATATTGCCATTTCTCTTGGTATACTTTTGTTTGGGGTACATCATTTACCGCAACCAG GTTTGCATACTGTTTTTATTATTCTTTTTCAATATATACACTCATATTTCTTCATTGTTGTAAAATGTGTACCTAATATA ACACGGCAAGTGGATAACTGTTTATGTAAAGTGCACACTAAAAAAATGTGTTTCATTACTTTCTATCTAATCCCCACCTT GGGAGAAAAGGCTAGTTGTTATTGCTGTTGTATATTTAATTTCCATCTAATCCTTATAATTTTCATCCATGAATTCAAAT TATCCTATTTTGGTGTTGGTTCTCTCTGATATGATTCCAGAGGCAAGGTGTGGTCAGTTCATTTTAAAATTCTAATGATA TCTCAAATATCTTTGGGTGACAGTTATTAAACGTTTATGTGCCCAAGTACCAAACTGGAGGAGAGTTTTGGCCAACAGTG CACAACTACACAATTTTTTCATTGATACTGATGCATATTATAGTAATTGGGATATTTGGACTGAAGAAGCTTCCACTAGC ATCTGGCTTGACTCTTCCACTTCCTATTGTCACACTTCTATTCAATGAGTACTGCCAGAAACGGTTCTTTCCTATATTCA GAGCTTATCCTGCGGAAGTACGTTGGTTTAAAATTAATGATAAGTTTACCTTATTCTTTTCTTGATTATGAGGCCTGTAG GTTTTCCTCTGGCCATATTTTCATCTATATGCTTTTTTCATTTTTCCTTATTTAGGTTTGAGGTTGTTATTAGTTACTAC TAAAACAATTTTCACATGCTCTGATAAACTGTTTGTTTGGGCGACCTCTAATGAACATTTAACTTCTCATCATTGATGAT TGTGGTGATGGCTTCTGATGCAATGGTTACTATCAGAAAATCCTTGTTACTAGTTAGTTCTTCACTTTGGTCTTCTGGCC AAACTAGGTATTATGCATTGATTCACAACAAAATTACTTGCAGTAAACAGTTAAAAAATGTACCACTGGGATATTAAGTT GGTGTTAGATGTAGAGGAAGATCGGAAGCCTGACATACTCAAAGTCATGAACTTGTAAACAGATAAATTTATTTCAAATT TTTAGTACGAACTATCCTGGTAAGAAATGCTGTAAAGGAAGTATTCATTCCATCTTATATCTGGCCATCTGGGGAATGGC TTGGTTTGGCTCATCAAACTCACTTTACTTATAATGTTCATTTTGTTGCTAGGTTGGTTTCACCTAAAATGTATGACAAT TTATGAGTAGCTACTGTTGCAGTATACTGATTGAAGCCATGATGATAATTTTTCTCTAGTATTTCCTTTTGCTCTGAAGT CCACATATGGCTGATTATTCTTTTTCCGATTGCGTGTTATTTCTTATCTATTTCTCCCCTTCTGCATTCTTATGAATTTG TTTCCATCAGTGTTTGATCAAGAAGGACAGAGAAGACCAAAATGATCCTGCAATGTCTGAATTTTATGATAAGTTGACCA ATGCATATAATGATCCAGCTCTGATGCCAATCAAATATCCCGGAGGGTTTAGTAGTGGCAGGTCTCCTCTACTTCAGAGG CCAGAAGTTTAAGATTCCAATTAGTTCCCTATGGCTTTGCTTGTAACTTGTAGAGTTCAAAACTAACAATCTGAAGAGTT CAGCGGATGGTTTGTGATGCTTATACTGATCTTCAAGGCTTCAACTTATGACTTTCTTTCAAATTTTGTTTTTGACAGTC CAGGGTGCTGCATATCTGTTGTTTTTTTTCTTGTAAGCCGTTAGAGTTGAGAATTTATACATGTAATGCTTTACTCACTA ATTTATTTAGAGTGAGGCCTCTAAATATTTGTTGAAGACAAAACTGTTTAGAAGTTTCTGATGAAACCAATGGATGAAAC TTGGAAACAGGTTTTGATGTATGCCATAAGATTACAAAATGTGAATGACAGCTCTTCTGTCAGACAAGACTAGGTTATAA TAATCCCACAAGACTGTGGAGCACGATATTGTCATTTGGTTATTGTAACTAATTACAGTATCAAATTCTGTAACTTATCT AGTTGTACTGAAAGAAAATACATTCATACTATAATGGCTACGACTTTGAAGTTTGAACCACATACTGAGAAATGGTAGAT GCACTTATAGTTTAGAGTCAAATCCCAGCTTCCACTTGTGTAATCCTTCATTGAACAAAGCCATCAATTTTCATTTCCAA GAATAGTTAATGCGCTGTGAGATATTTAGAGATAGCACTGGTTCCTGAATCTTCAACAGTGCCCATGGCTTGACAGAAAA TGGTGAAGAGTCTAAGAAATGATAGAATGTTTTGAACTTGGAGTAGAGCAGTCAATGAAAAAAGCTATTCAAGGTCATCT AACAATAATTTACACCAGAATGCTTGTTTTTTTGCTGCCTTGGATCAACAATAGAGTGGAAAAAAATCAAAGATATGGAA GATCCCTTAAGGACAACTTTGTACCATTGGCTTGTGGCAAAATCCAGCCTGCACTTAAGGCATCATATCGCCCTGAATAA TCATTGCCGTCACGCTTAAACTTTATGCTTCCACCCAACTACAGCCAGGAGTTTTTCTTGCTCCCCTAGCTAACATGGCT TGCCTCATTTCTTCAGCTTCTACGGTCCTTCCTGCAGCAACATAGATATCTCGGAGGAGAATATAGTATCCCCCTTCATC TGGTTTCAACTCCAACAACTTCTTTATCACCCTTTCCCCCATGTCAACATCACCATGAATCCTGCAGGCTCCAAGCAATG CTCCCCAAATAATATCATTGCTTGGAATTGGCATGTTTGTAAGCAGATCATATGCCTCCTGCAATCTCCCTGAACGCCCC AACATATCCACCACGGCACCATAATGCTCAATCCTAGGTTCAACTTGATAGTCCCTTTTCATGCTCTCAAACAATTTAAT CCCTTCATCAACCAGCCCCTTATGAGCATGTGCAACCAAAAGTGCCAGCATCGTTACCCAATCAGGCAAAACCCCAGAAC CAATCATCCAATCAAACAACCTCAACGCATCATCGGCATACCCATGGTTCGCACACACCATCATCATCGAGTTCCACGTG ATCAAGCTCTTCCTGCTCATGCCATGGAACACTTGCCAAGCCTGCTCCAAGCATCCCGACTTCCCATACATATCAATGAG AGCATTGCAAATCGCAGTCATCCACCCAAACCCATTCTCCTCCACAAACCTGTGCACCATCCTCCCAGTTTCCCCGTCCC CCAATTCCGCACAGGCCGATATCACACTCACCATGGTAACCTCATCCGGCCACACCCCAGCACCCCTCATCTCCCGAAAC AACTCCAGCGCCTCTTGTGGCCGCTTTGCCTGCGCATACCCAGACAACATGCTAGTCCACGAAACCACATCCCTCTCCGG CATTTCATCAAACACCCTTCTTGCAATTTCCAGTTCACCAGCTCTCACGTGTGCCACAAGCAACCCCGACCAAGACACAA CATCAACCTCCACACCCACTTTCAAAGCATCCTCAAACACCCTCCGAGCTAAAACGGCCATTCCCCCAACCGCATACAAA TGTATCAACGCGTTCTGAACGTGCAGGTGGCGGCAAAACCCGAACTTCAAAACGGCGCCATGCGGGTCATGGACCAGAGG GGTGGTGGCAGCGCGTGACTTGAGCAAGAAGGCGAACGAATACTCATCCGGGGCGACACCATCTTGCCTCATGCGGTTGA AGAGGAAGGTGGAGAGGGAAGGGGAGGTGGAGTGGGAGTGAGCGCGGATGAGGGTGTTGTAGAAGAAGGCGGTTGGGTGG GTAATTTGTTCGAACATGCGGTGGGCGTAGTGTAAGTCGCCGAAGGGGGAGACGGCGGCGAAGCGGAGGAGCTTGCCGAG AACGACGGCGTGGTGGTGGAGGCAGGTGCGGAAGGCGTGAGCGTGGAGGAGTTTGAGGTGTCGCATGGAAGTGCACCTCT CTGCCATGTCTGCAAGTAATGCAACAGCGACGGTTCCCATTGTAGTGTACTCGTCGTCGTTGATTAGTTCTGAGTCACCA TCGCTGAGAAATGGCGCGGACACCTTGGTTTCAAAGCTTGATTTCAAAGCTCAAGCCAAGTTTATA
CDS sequence (LotjaGi1g1v0506200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTTGGCTGCTCTTCTAACTTCAGTTGGAATTAATCTTGGCCTATGTTTTATATTCTTGACCCTGTACTCCATATT AAGGAAGCAGCCCGGTAATATTGCTGTCTATGCACCGCTCCTAATTTCTGAAGGAAAACATCAAGAGGGTCATCATTTTA ACTTGGAAAGTCTGTTACCTACTGCTGGTTGGGTGAGAAGAGCATGGGAGCCCTCTGAAGACGAATTTTTATCAACTGCG GGATTAGATGCTTTTGTCTTCATGCGTATCTTTGTCTTCAGTTTAAAAGTATTTACTTTTGGTTCAATAGTTGGTATATT CTTTCTGCTTCCAATTAACTATATGGGGACTCAGCTTCGTGATAACTCTGATTTTCAAAAGAAGTCTCTGGATGCCTTCA GCATTTCTAACGTGAACAATGGCTCAAACAGGTTATGGATCCATTTTTGCGCTGCATATGTTTTCACGGGAGGTGTTTGC ATTCTTCTTTATCATGAGTATGCATATATTTCATCAAAAAGAATTGCTTGCTTTTATTCATCCAAGCCGGAGCCTCATCA ATTTACTATATTAGTACGGGGTATTCCTGTTCCGCTGGGAAGCACTTGTAATGATGCGGTTGAGCGCTTCTTTCTGGAGT ATCACCCTTCTACTTATCTTTCGCATTCGGTTGTCCGTCGAAGCAGCAAACTTCAAATTCTAACTACTGATGCAGAGAGA CTCTACAAAAGGCTTACCAAACTGAAACATAAAGATAACACAACTTCCAGACATAGGCGTGATGGATGTTTTGGACTTTT TGGACATAAAGTTGATACTCTAGATCATTATGAAAAAACATTGGGAGACATTGCTGATAATGTGAGAATAGAACAGTCTT CAATGTCATTGGGAGGAAAGGAAGTCCCAGCTGCTTTTGTCTCATTTAAGTCACGATTTGGTGCTGCAATAGCTTTAAAC ATTCAAGAAGGTGTCAATCCTACAGACTGGATTACTGAGCAAGCTCCAGAGCCTCATGATGTTTATTGGCCTTTCTTTTC TGTCACGTTCATCAAAAGATGGATCAGCAAGCTGGTGGCTTTTGTTGCTTGCAATGCTCTTACAATTCTATTTTTGATCC CAGTTGCATTAGTACAAGGTCTTACCCATCTTGATCAGTTGGAAACCATGTTCCCATCTCTAAGAGGCATACTAAGACTG GCAGTTGTGAGCCAAGTTATAACAGGATACCTTCCGATTCAGATTCTTCAAGTGTTTCTATCCTTTGTGCCACCTATTAT GATTATGCTTTCATCCTTGCAAGGACACATCTCATGGAGTCAGATACAAAAAAGTGCGTGCAGTAAAGTATTATGGTTTA CCATTTGGAACATTTTCTTTGCAAATGTACTATCAGGGTCAGCTCTCTATCGATTGAATTACTTTCTTGAACCCAAAGAG TTCCCCAGAGTACTAGCTGAAGCCGTGCCGGTACAGGCGTCATTCTTCATTGCATATGTTGTGACATTCGGATGGACTAA CATAGCATCTGAACTCTTTCAATTGATTCCACTTGCTTACAATTATATAAATAGAACTTTTATTGGAGATGGTGATGATG ATTTTGAGGCACCATCAATTCCTTACCACAGCGAAATTCCCAGGATTCTTTTCTTTGGTCTTCTTGGTGTAACATACGTC ATCCTTGCTCCTCTGATATTGCCATTTCTCTTGGTATACTTTTGTTTGGGGTACATCATTTACCGCAACCAGTTATTAAA CGTTTATGTGCCCAAGTACCAAACTGGAGGAGAGTTTTGGCCAACAGTGCACAACTACACAATTTTTTCATTGATACTGA TGCATATTATAGTAATTGGGATATTTGGACTGAAGAAGCTTCCACTAGCATCTGGCTTGACTCTTCCACTTCCTATTGTC ACACTTCTATTCAATGAGTACTGCCAGAAACGGTTCTTTCCTATATTCAGAGCTTATCCTGCGGAATGTTTGATCAAGAA GGACAGAGAAGACCAAAATGATCCTGCAATGTCTGAATTTTATGATAAGTTGACCAATGCATATAATGATCCAGCTCTGA TGCCAATCAAATATCCCGGAGGGTTTAGTAGTGGCAGGTCTCCTCTACTTCAGAGGCCAGAAGTTTAA
Protein sequence (LotjaGi1g1v0506200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MILAALLTSVGINLGLCFIFLTLYSILRKQPGNIAVYAPLLISEGKHQEGHHFNLESLLPTAGWVRRAWEPSEDEFLSTA GLDAFVFMRIFVFSLKVFTFGSIVGIFFLLPINYMGTQLRDNSDFQKKSLDAFSISNVNNGSNRLWIHFCAAYVFTGGVC ILLYHEYAYISSKRIACFYSSKPEPHQFTILVRGIPVPLGSTCNDAVERFFLEYHPSTYLSHSVVRRSSKLQILTTDAER LYKRLTKLKHKDNTTSRHRRDGCFGLFGHKVDTLDHYEKTLGDIADNVRIEQSSMSLGGKEVPAAFVSFKSRFGAAIALN IQEGVNPTDWITEQAPEPHDVYWPFFSVTFIKRWISKLVAFVACNALTILFLIPVALVQGLTHLDQLETMFPSLRGILRL AVVSQVITGYLPIQILQVFLSFVPPIMIMLSSLQGHISWSQIQKSACSKVLWFTIWNIFFANVLSGSALYRLNYFLEPKE FPRVLAEAVPVQASFFIAYVVTFGWTNIASELFQLIPLAYNYINRTFIGDGDDDFEAPSIPYHSEIPRILFFGLLGVTYV ILAPLILPFLLVYFCLGYIIYRNQLLNVYVPKYQTGGEFWPTVHNYTIFSLILMHIIVIGIFGLKKLPLASGLTLPLPIV TLLFNEYCQKRFFPIFRAYPAECLIKKDREDQNDPAMSEFYDKLTNAYNDPALMPIKYPGGFSSGRSPLLQRPEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 5 | 5 | - | – | |
PANTHER | 1 | 714 | 714 | 0.0 | – | |
PANTHER | 1 | 714 | 714 | 0.0 | – | |
TMHMM | 5 | 27 | 23 | - | – | |
Pfam | 6 | 166 | 161 | 3.5E-41 | ||
Phobius | 6 | 27 | 22 | - | – | |
Phobius | 28 | 89 | 62 | - | – | |
Phobius | 90 | 112 | 23 | - | – | |
TMHMM | 90 | 112 | 23 | - | – | |
Phobius | 113 | 144 | 32 | - | – | |
Phobius | 145 | 164 | 20 | - | – | |
TMHMM | 145 | 164 | 20 | - | – | |
Phobius | 165 | 357 | 193 | - | – | |
Pfam | 187 | 344 | 158 | 4.9E-31 | ||
Coils | 231 | 251 | 21 | - | – | |
Pfam | 357 | 622 | 266 | 1.2E-70 | ||
Phobius | 358 | 377 | 20 | - | – | |
TMHMM | 359 | 381 | 23 | - | – | |
Phobius | 378 | 396 | 19 | - | – | |
TMHMM | 396 | 413 | 18 | - | – | |
Phobius | 397 | 430 | 34 | - | – | |
TMHMM | 418 | 440 | 23 | - | – | |
Phobius | 431 | 449 | 19 | - | – | |
TMHMM | 450 | 472 | 23 | - | – | |
Phobius | 450 | 470 | 21 | - | – | |
Phobius | 471 | 489 | 19 | - | – | |
TMHMM | 484 | 506 | 23 | - | – | |
Phobius | 490 | 508 | 19 | - | – | |
Phobius | 509 | 548 | 40 | - | – | |
Phobius | 549 | 581 | 33 | - | – | |
TMHMM | 559 | 581 | 23 | - | – | |
Phobius | 582 | 605 | 24 | - | – | |
TMHMM | 602 | 624 | 23 | - | – | |
Phobius | 606 | 624 | 19 | - | – | |
Phobius | 625 | 715 | 91 | - | – | |
TMHMM | 629 | 648 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi1g1v0506200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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