Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0530800 |
| Transcript ID | LotjaGi1g1v0530800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 7 long form isogeny; TAIR: AT2G25010.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|Q9SK32|MAIL1_ARATH Protein MAIN-LIKE 1; TrEMBL-Plants: tr|A0A0S3RJC1|A0A0S3RJC1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0530800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105787934..105791025) extracted from Lotus japonicus Gifu genome v1.2.
GTGAATTCATAGATAATTTATTTAGTGAATTTATTTAGAGATTTAATTGAGAGATTTAATAATTGAGAGACTATAATTTA TTTAGTGAATTTATTTAGAGATTTAATTGAGAGATTTAATAATTGAGAGACTATAATTTATTTAGTGAATTTATTTAGAG ATTTAATTGAGAGATCTAATAATTGAGAGACTATAAAATTAATTGATGTTAATGCTATTAAATTTGTTTGCTCTGAATAT ATAGTGAGAATGAAGAACAGAAAGAGGTCTCGAGCTAGTGAGGATGTGGGGGCTACTGAGGATAGACACTGACGCTTACA TGCTTCTAGCCGGCGCGGCGATCATGCTGCAACCACTCAGGCGGTGGAGGCTTCAGCTCCAGTTGATACTATGCAGTCGC TCATGGTAGAGTCTTCGGCTACAGTTGCCACTGTGCTGTCTACTAGAGGAGAGTCTTCAGCTCTAGCTATGGATGCGATT GTGCTGGATCCCGTGGTTGACCCTACTGATCCAGTTCCTACTCCGCCGTCTCCCATGGTTGAGTTATCTCCCCATGAGTC ATCAGGCGAGGAGTCATCAGGCGAGGAGTCATCCAACGAGGATAGTATTCCTCCTCCTAATGTTGATGTTGATGTCGTAC CAGAGGAGGGGGCACAGGGTGGCGAGGAGGACCTGATCCAGAGGTTGCCGCCGTTTCCGGGGGGGCCTGTTGAGCTGTCG CTTCTCACGCATTATGCTGATCACAAGGCTCCCTGGACGTGGCATGCACTCCTACGCACAGACGATCGGTATGAGGACCG TCGACACTTGAAGGTGGCCACAGTTGGGGGGAAGGTATGAAACCTTGCTTGTGATGGTGATTCAGACAGTCATAGGCGGG TTCGAGAGTTGATTGAGCAGACGGGTCTTCATCAGCTACCCTGGTGCGGCTACCCGGAGACAGATGCAGGCCTCATTTTA GCCCTTGTGGAGCGATGGCATGAGGAGACTAGTAGCTTCCACATGCCGTTCGGGGAGATGACTATCACCCTGGACGACGT GTCGGCTCTTCTCCATCTCCCCATGGGGTCGAGGTTCTATACGCCTGGAATGGGGGAGAGGGACGAGTGTGCAGCGCTCT GCGCTGAGCTGATGGGAGGATCTGCTGCTCGCTATCATGCTGAGTTTGATACGAACAGGAGCCAGACTATTCGCTTTGGG GTCTTGAAGACGCTGTATGATGATGCGTTGGAGGGTATGTCTTAATTATTACTTGATTAAATTGTATCTATTGTTATTGT ATTATTATAAACTGTTAACTTAATTCATTTCATTGTAGATCACCGATACAAGGATGCTGCGTGGATTTGGCTGGTGAACC AGCTAGGCGCGACGCTCTTTGCTAGCAAGAGCGGAGGCTACCACACGACCGTGTACTGGATATGGATGTTGCAGGATCTT GGTCGAGTGTCCGAGTATGCGTGGGGCGCGATTGCGCTTGCTACGTTGTACGACCAGCTTGGTCGAGCGTCCAGGAGGGG GACGACACAGATGGGAGGTTTCAGCTCGCTCCTGCTAGGATGGGCCTACGAGTACCTTTCTGACCGCGTCATTATCCGGA GGGCGGATCCGGACTACTCGCAGGACCAGCCTAGGGCGTGGCGGTGGGTTACGTCCTGGGTCGGGCATGCAGGCCTCGAT GAGAGGCGAGTGATGCTCGATGAGCTGACGGTGCATGACATTATATGGATACTCCCCTACAAAAAGAAAGTTTCGTCCTC GAAACTCAGGGTTCCGTGAAAAGTTCGGGATACTGTTCCTTGATCTTATCTTCTAATTCCCATGTAGCGTCTCCCGTGTT GTTGTTCCATAACACTTTCACTAATGCAATATGCTTCCCTCTCAGCTGTTTCACTCTTCTGTCCCCAATGCTAATCGGTG GTGCCTCAAAAGTCAAATCATCCTTCAGTTCAACGTTGTCTGGCTCGATTACATGTGTCGGGTCTGGAATGTACTTCCTC AACTGCGACACGTGAAAAACATCGTGAATGTTGGAAAGAAACGGTGGTAGCGCAATCTGATACGCAACTGGTCCAACACG GCGAGTGATCTGGTAAGGTCCAATGAACTTTGGCGTGAGCTTCCATTTGACTGTGCTGTTCGACGTCATCTACCAGAGAT GGTTCTGCGCCAGTTTGGCTACATACAGGATGTCCCTCGACACCCCTCTGAGATCCAGACGATTGGGTCCCTTGCTGAGA CCGCAGATGCTGCCTATGCTGACTTTGTGCCGCACCTGCGCCCTCGGGGGATCCCTGCTACTTATTCGGGAGAGGCTGTG GAGGATTACATGAGGTGGTATAGCGGTGTGTCCCATCGGTTCATCATCCCTGATGATAGGAGGGAGGAGCTCAGTGCTGT GGTAAGTTTGAATTTTATTTTTCCATTCAATTGTGATTTTTGTTCATGATATTTTATTTGTACCTAAACATGTATTGTAC ATTATTTTTGCAGACGGTTGTGCGTCGGGCCGTGGACTTGTTGGAGCAGTCACTGGAGGTGCTTGACGCTCTTGCAGTGG GCACGCATGCCCGATCCCTCATTAAGAGGGCGCTGGATCTTATTAGATCCAGTTCCTTCATTGGTACCCAGGGAGTAGCC TTTGCTGCTGTCCGAGGAGCTGGAGCTCCGGGAGGCAGAGGTCGTGGAGGCAGAGCCCGTGGAGATGGTGCCCGTGGAGG CAGAGCTCATGGACCTAGAGGTCGTAGGGGGGCCGGTAGGGGTCGGGTCGAGTGATTGACTGCATATTTGACTCTCTTTT TGTATATTTTTATATTATGTCATGGGTCTCTTTGTATTATGACTCTCTTTATATTAATCAGGCTTTCTATTTCCACTCAT TATATTTAGACTCTTATATTGAAAAAAACCTGTTTAACTACACCGTAAATAATCAAAGGCAGGAAAAGTAACATAAATAA TCCATGACAAGCAGTTCAAAGGGTACACAAAATTATTCAGAAGCAACACGTAAACAAAATTAATCCTCAGCGATATCGAT GAAGTCGTGGGGATTTTATATTTTTTTGTCTTGTATGTGCAATCCATAATCA
CDS sequence (LotjaGi1g1v0530800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTTCGGGGAGATGACTATCACCCTGGACGACGTGTCGGCTCTTCTCCATCTCCCCATGGGGTCGAGGTTCTATAC GCCTGGAATGGGGGAGAGGGACGAGTGTGCAGCGCTCTGCGCTGAGCTGATGGGAGGATCTGCTGCTCGCTATCATGCTG AGTTTGATACGAACAGGAGCCAGACTATTCGCTTTGGGGTCTTGAAGACGCTGTATGATGATGCGTTGGAGGATCACCGA TACAAGGATGCTGCGTGGATTTGGCTGGTGAACCAGCTAGGCGCGACGCTCTTTGCTAGCAAGAGCGGAGGCTACCACAC GACCGTGTACTGGATATGGATGTTGCAGGATCTTGGTCGAGTGTCCGAGTATGCGTGGGGCGCGATTGCGCTTGCTACGT TGTACGACCAGCTTGGTCGAGCGTCCAGGAGGGGGACGACACAGATGGGAGGTTTCAGCTCGCTCCTGCTAGGATGGGCC TACGAGTACCTTTCTGACCGCGTCATTATCCGGAGGGCGGATCCGGACTACTCGCAGGACCAGCCTAGGGCGTGGCGGTG GGTTACGTCCTGGGTCGGGCATGCAGGCCTCGATGAGAGGCGAGTGATGCTCGATGAGCTGACGGTGCATGACATTATAT GGATACTCCCCTACAAAAAGAAAGTTTCGTCCTCGAAACTCAGGGTTCCGTGA
Protein sequence (LotjaGi1g1v0530800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPFGEMTITLDDVSALLHLPMGSRFYTPGMGERDECAALCAELMGGSAARYHAEFDTNRSQTIRFGVLKTLYDDALEDHR YKDAAWIWLVNQLGATLFASKSGGYHTTVYWIWMLQDLGRVSEYAWGAIALATLYDQLGRASRRGTTQMGGFSSLLLGWA YEYLSDRVIIRRADPDYSQDQPRAWRWVTSWVGHAGLDERRVMLDELTVHDIIWILPYKKKVSSSKLRVP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 224 | 224 | 1.4E-24 | ||
| PANTHER | 3 | 220 | 218 | 2.6E-27 | – | |
| PANTHER | 3 | 220 | 218 | 2.6E-27 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0530800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…