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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0531100 |
| Transcript ID | LotjaGi1g1v0531100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transducin/WD40 repeat protein; TAIR: AT3G13340.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A151TCU6|A0A151TCU6_CAJCA Putative WD repeat-containing protein C2A9.03; Found in the gene: LotjaGi1g1v0531100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105808158..105815917) extracted from Lotus japonicus Gifu genome v1.2.
CTTCATAATAATAATTACCAATATATAATATTATTATTATTATTTTATTTTATTATTATGCAGAAGAAGAGATTGAGAGA AGAAGAAGAACCGTGTTCCTTTACCTTTCTCATTCATTCCAGAAACACATAGCAATCTCACCAAGTTTCGAACTTGGATG CAGAAACGCAATCATGTCCTACCATGACCTATACCCTTTTGACCAATTGGCGGAAGAAGATTTCTTCGACGAGATTGATG ACCAAAACTACGGTGGGGGTGTTGCCGATGTTGGTCTTGATGAATATGAGATGGTTTGTTTCTTTTCCTTTTTCTCTTGC TGGGTTTGATTTAATTTTGAGTTGTTTTATGTAATCATTGAATTGAGTGAAAAAATTGGGTTTTTTTTTTTAATGTTGTT GTTTTGTTTTTGTTTGCTGTGTTTGATGATTGGAGCAGCTTACTAAGGTGACTGATACATCAGCTGCACAAGCTAGGAAG GGGAAGGATATTCAGGGTATTCCATGGGAGAGCTTGAACATAACCAGAGGAAGTTACAGATTGACAAGGCTTGAGCAGTA TAGGAATTTTGAGAACATTCTTACATCTGGGGAAGCTGTTGACAAGGTTTTTTGTTTTTCTCTCTTTTATCCCTTTTTCC TTTGTATAGGGTTGTTGGAACTTTTGAGGCATTAGAAGTTGTTGGACAAATATTTTAATGTTCAATTTTTTTTGGGGGGT CATAGGAATTGAAACAAATGGAGAAGGGTGGAAAATACTTTGATTTCTCCTACAATACAAGAATGGTTAAGCCTACCATC CTTCATTTTCAGGTTTGTTGTTTTCTTTTCTTTAATATGCTGCCTGCAATTACACTGTAATTTAAATGACTAATAAGCAT TTATACTGTTTGATGAGAGTGCATGGCTTGAAAGTTGAAGCTCATGCATGTACTTATGATAGATGTTATATTATTGGTTG CCTTTCATCAGCGATTGACCAAATGTTGTCGGTTCTGTGACTGTCTGGTTGTTCAGCTGCACTTCGTGTGCATTTATTCA TTTCGATTTATGGATATTGAGAAAAGAAAACTGGAGAATCTTCGGAGTTATTATTGTGTCTCTAATCCCTTTGACTGTAC TATGGTGTAGTAGTTGGATTGAAGTTATACACACACATATATATATATATATATATTTCAAGTGAGAGGAGTGTCTTATT GTAAGAGATGAGAACATTAATTAACAACCATTTGATTATTATCAACGATTTAGAAGAAAAATCCGCACACTCATCTATCT TGCTCTGCTATACACCGAAACTTTATAGCACACATTATACCCAATTCATCATGTTTGCTTTCGATGCCCAAGCAACAACA ATTGTTTGTGAATCACTCACAGGTGATCTTCGATTCGAAACTAATCAATAATATTTATGCTTGTGGGCTGTTGAAAATTT TAATTGTCAACACTATCCCTCATCATTAATCTGTTTGGCCGCGGCGGGTGGATCTTGGTATGTTGCAGATGACCAGAGTG GTGGATGCGCGGTGAATATGGTTGAATGTGGGAGTGATTGAGTTCGATTAGGAAAATAGATTTTCCTGTTCTACTTCATG CTTTGTGTGCCCTATTCACTGCACACTCTTGTGCGACCGTAATCATCATCCAGTTCTTCCCCAATTTAAACATTAGATGA CTGTGTGGTTGGGCTAGAGAGCAGTTTTGAACAATTAGTGATGGTCTTGGTAGGTCGATTATGGAGGGCTGACGGCAGAA GCGTGTTCGGTTCCTGGATTGTGTGTGATTGAGGACGAAGGAACTTTTTGAATTAAAATTAAATCTGGACCGTCAATCTT GATCCGATGGTTCCTAATTAATGTTCCCATCTCTCACAATAAGACACTCCTCTCACTTGATATGCCCCCTTTATATATAC TCAAGCACGTGTCAATTTACATTGGAGACGAGAGACATTTCTGATTTTCTGTTTCTTTTTACTGTATATGTATGGTCTTA CGAAATAGATTTGAGTAGGTTTATTTATTAATTTTCAAGCCTGATGAATTTACTGAAAAAACTCTCGCATAATAACGTAT TTGTTTGTGGGGTGCAGCTGAGGAACTTAGTATGGGCTACTTCAAAACATGATGTCTACCTTATCTCCAACTACTCAGTT ATGCACTGGTCATCATTAAGTGGCAATTTGTCTGAGATAATCAATTTTGCTGGTCATGTAGCCCCTACTGAGGTAATGCA GTCTCTAATGTGATTTGATTTTTCATGCTTTATTGATGTACGGCCTATTTAGGAGCCCATATTTGTTTTTCGGGATCACA AGAAATCTGCAGCTGTTCAAAATCCTGTGTGATTAATAAATCTGGAAATGTCAACATGGTTCATTTGCGAAGATAATTTA GTTATGTGTGGTTAATAGAATTAATTTTATACAAGAACACAATCTAAATGCGTTCATGTTGTTTCTTTAATTAATTATAC ATTTATATTTTCTATGGTTCACTTAACTGAATTCTTTGAGCTTGTAGAGACATGCTGGAAGTCAGTTGGAGGGATTTTCG CAGACCCAGATTAGCACATTGGCTGTCAAGGATAATTTTCTTGTCGCTGGTGGCTTCCAAGGAGAGCTTACTTGCAAGGT TAGTCCACATGATATGTGCTTTATCACGTACATAGTTTTTTTTTTTGTAATTCTATTAACTGTCTATATTTTTAGCATAG AATTTTATGAACTATATCAGCTTATGTCGTGTGTGGATAATGGACAGATAGCTCTTTTATTTTGGAGCATGTTTATGGAG TGTCTGTTATTGCAATTGTACCTTTCAGTGTGATAATTTGAAATGAGGAAATGGCTGTACTTTGTTTTTCCAGTTTATCT TAGTACGATTATATTGGGTGCTGTTTATTGAATGTCTGTATTGAATGCAGCGTTTGGATAAGAAGGGAGTAAGCTTTTGT ACACGGACCACACATGATGATAATGCTATAACAAATGCAGTTGAAATATATGACAGCTTGAGGTATTTCTTGTACCGAGT TTGTTTGTCTCAGTTTGCAACATTGCTTGACATGGAAATTTTTGCAGTGGCGCACCTCATTTTATAGCTGCCAATAATGA TTGTGGTGTGAGGGAATATGACATAGAAAGCTTTCAGCTTTTAAATCACGTACAGTTCCCTTGGCCAGTGAATGTAAGTA CTCTTTAAGCAATGAGTGGTGCTGTTTATTTTTGCCTTTCCATTTTTTTCTTTTCCTTCATTATTTTTCTGGCTGTCGCC TAATTATTCTTCCATTCAGGTTCATTTCAGTTTTTCTCTTTGTACTGCTGGACTTACTTTTTTATTTGATAAAATAATTT TTATTAGAAATGGGAAAAAAAAACAGTACAAGAAGATGCAGGATAAGGAATCCTCAGAAAAGATAAAATTAAACCAAAAC AAAGACACAAACTGAGTTTCTATCATTATAAGCTAGTCAGTGTGGAAGAGCTGTCCGATCTCTTTTGGCCTGTTTGATAA CTGTTTCCAAAACAGTTTTCAGTTTTGAAAAACTGAAAACTTGTTTGGTAAGACATCTTTTCAAAAACAGTTTTTGAAAA CAGTTCTCATTTTCAGTTTTTAAAACTAAAAAACCAAAACAGGTAAAAGATGTTTTCAGTTTCAGTTTTTAGTTTTCAGA TATCAGTTTTCTAAATGTTCAAAAACATGTCATTCAAACTGTTTTCTTTTTCTGAAAACTGTTTTTAAGAATTGTTTCTG AAAACTATTTTAAAAACTGAAAACTAAAACTGCTATCAAACAGGCCCTTTGTCTTTCCTAGTTAATTCCCCTGAAATAAT CCATGTGCTGAACACCGAAGAGAAGCCGCATGCCGGTTCCATCCAAAGCATATTTAAAGCCGATAATACACCCTTAAAAA AGTCAAACGTTCCTTTCCAACTGCATAAACCGCCAAATCCTGCAAACTGCGAATTGCCACAAGGTTATGTTCCCCTTCTT ATTACCAAATCCTTGAAAGTTGACTTGAAGAAACTGATCAAACAAACTAGGATAAACCAAGTTCCTTCCAAAAATACCAA AGTGCTTATTTCAAAGATAGCTTACAACTGAACGACAGAGGAGTAATTGAGGCGGTCTCTGATTCTGAACTATAAATGAC ACATATCAGGAGAGATCTTTATGGCGATGTAATTAGTGTTAATTCTATTATTTAGTATTTCTGAACAAAGAAATGATTTG ACATTTGAATGAGCTTTAGATTTCCAAATTGGCTTATCTTGAGAAAAAATTTTCCCTTCTAGGAGAATGTGAGGAATTGA AAGTAATATTTGCATGAAAATTGAAATAATACTAGACGAGTCCAGCTTCCAAATTCTTATGTCTCATTAGAAGGACATGT AGCAGCATCAAGTAAAGACAAAAGGTATTGAAGTTCACTAATTTCTCTTTTGTTCAGAATGTGAGGAATTGAAAGTAATA TTTGCATGAAAATTGAAAAAAATACCAGAAGAGTCCAGTTTCCAAATTCTTATGTCTCATTAGAAGGAAATGTAGCAGCA TCAAGTAAAGACAAAAGGGTTTGAAGTTCACTAATTTCTCTTTAGTTCAGATTCTATAAATTGTTGGATTGTCATAAACA AATTTGATCTGTCAAAAACAGTGATGAAGGATGGACGAACCACAAGAACAGTGGGGTGCCATATCATTGAGAGGGAGGAG GGTCTAGTACTAACTATCAAAATCACATAATCAAGCAGATTTTTCTTTCTTTTTATTTGTAGAACAGTTCTTGAAAATTG TTTTCAGAAACAAAAAACTCGAACACATTTAAACGCACCCTAATTTTCTTGCTTCATGCATTGTCACTTGCATTCAGTTT GTATGAACTTCACCAATTTTTCCTTACCTCTATATTAATTCAAGAAAATGAAGATTTGATGGGATATTTTGATTGCCTTT ATCTCTTAAACTATTGTGTTTTTTTAAATATATACTTTTTTTATTCCTAACTATATTTTCTTCATGCAGCACACATCAAT CAGTCCAGATCGTAAGCTAATGACTGTTGTTGGAGATCATCTGGATGGACTACTAGTGGATCCTCAAAACGGGAAGGTAC ATAGTTGATAGTTCCTCTCATCATATATGTCTTGGATGTTTTTTTTCTCTCCCTGGAGGTCTGGTTTTTGTTTCAATGAA TATTCTGTTGGTGTCTTTAAATTAGCTTCAGATGGTCTTTTAATTTTCCATCTATTTGCCAATAGATCAAATACTTCGTG TTGCATTTTGTTTGTCCTAACTTTATGATTATTTTTTTGTTATAGAATGATGGATATGGTTTTCTGATTAAGTTTTCCTA TTTGGCTTGTGGATATTGTAAATGCCGAAGATAAAACTTCTTGTCTTCATTTTGTTAACTTGAAAGTTTCATTTTTATCA AATTATTGGTAGTAAACTAGATATTCTTTGCAACTATAAAAAGTAAGACTTTATCTATTCAGATCAAAATGAACTAGTAC ATTTCACAATTTATTGGGGCACATGATGTTGGTCCATCTTTCTTTAGTTTAAGTCAATCATACTATAGGAGAAAATGGGA AAGAAGCAAAGCTTTTATAGAACATATATGCTATGGGTAGTCACTGTAAACTTATCAAGTGAGTTATTGTGTGCTAGAGA TGAAAAGAGTTGGGAGAGGAGCATATAATTGTGAAAGGATTTAATTTACATGCACCGATTCAGTATTTTCCTATTTGAAT TTATTTATGATGTGGTAAAATAATGAATAATGATAGTGTCCTTATTAAAAAAAAATTACACTGTCTGTGTATAGTTAGTT ATTGAACTCAGCGAAATGCATATCAAGTAAAAACCATGTTCTTACTTCATTTCTTTATAGTAAGTTTTCAAAAAGCTGAA TACTATGTGAAGAAACTTCTAACATCTTTGGGATTTGTTTGCTTTTTTTAGACTGTGGCCACTATGGTTGGTCATCAAGA TTACTCTTTTGCATCTGCATGGCATCCTGCTGGACTCACCTTTGCCACAGGGAATCAGGACAAGACTTGCAGAGTATGGG ACGTTCGACGCTTATCGACCCCGGTTGCCGTTCTCAAGGGTAACCTCGGGGCAACGCGGTCGATTCGGTTTTCTTCAGAT GGTCAATTCATGGTTGTTGCTGAACCTGCAGATTTTGTGCATGTTTATAGTACAAAAGCAGATTACCAAAAACGTCAAGA GATTGATTTCTTTGGTGAAATTTCTGGGGTCTCTCTGAGTCCTGATGATGAGTGTATATATATAGGAATCTGGGACAGGA CTTATGCAAGCTTACTACAGTATAATAGGAGGCACTCAAATGAGTATCTGGATTCCTACTATTGATCTTGATGTTAACTT GTGGTGTATAATACTTGGGATTTGCCGTACCAGACCTGTGGCCCAGGTTTGCCCGCAGTGTACACATAGGGAACTTCCTC GCCTCCGCAAGCGAGAGTACTTTACCTCCCAAGACTCAATCCCAGGACCAGGACCTGCGGGCCAAGTACCTAGGGTACGC AAGTCTTGTTTTAGCAATATCATTGATGTTACCTTATAGAGCATTGTGGGATTCTTGCTAGTTGTTGTCCCTTCACTTTT GGTAGTGTGTTTTATGTAGGTCATTCTGATTGATCAAAGATCCTTAGCATCATAGGTCATTTCTAGTTTTCTACAAAGCA ATCAGGCTTCATCTGCATTGTATTTTCTGAACTTCTGATGTGAATGCCACCACCAGAAATCAGAAATTGCTTTGTTAACA TAGTTTTGTCGTATATTGTCTTCTCTTCATGGCTGCATTCTGCAATGCACATAGTTTTGTTAGCATTTATTTGGAAGATA AATGGTGCTTCAGCTGAGAAACTTCTAAGATGTAACCTTGCCTTGACATTGACTTCAGAATTCAGATTTATTTCTTTTTC CAGATATTATGTACATCAGCTGTCAAACTTGTTACTTGTGCAATCACATTGCTAATCTAATCATTAAATTTGGTTTATTA TCTTAATAATCATGTATACCTATTTTATTGATTAAGCAGTTATCTTCAACCGTTAACTTCCTTTTCGCTGAGTTTCCTTT CACTTATTTATACAGCAATTAACTATGATGATTAGGATAACACATTGATTCGTTGTCTATGATGAAACTAAGAAAAGAGG AGATGATAGAAATTAATCTCGAGAAATAATAGTAATAACTTTTTGTTTTACATCTACTGCTAAATATACTAGTAAAAAAA CATTAGAGGAGGCTATATGTGTTAACAAAACTGCGTGTAATGAATGTGAGTATGAATCTATAGATAACTAGGTTGTTGGT ATTTACATAAGTGTACTACAAGTATATACCTTATTTAGAGTCAAATAACATCGTATGATATGATGACAAGAGAAACAAAA ATAGAATATAGATAGAGTAGCCCAAAAGAATCCCGTGAAATCAATTTGGATCTTGTGACGAATGCTGGTCCCCATGACAC AACCCATGTTGCCTTGGACCTACACTAAGTAAGAAAATGACGACACAAAAAAGAAAGAAACTAGGAAGACTTTGAATAAA AAAGGTAAAACAAGCAATTAGGAATAATTTAGACTAAGATACTTTTCTCTGTGACATGATTTACAAGAAGATGCTATATT ATTGAGGGTGGTATGATGTATACCTAAGCCTAAAATACACTAATATTGAATCTCCTCATTTTTATTGTATGTTTTTCTTT
CDS sequence (LotjaGi1g1v0531100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTACCATGACCTATACCCTTTTGACCAATTGGCGGAAGAAGATTTCTTCGACGAGATTGATGACCAAAACTACGG TGGGGGTGTTGCCGATGTTGGTCTTGATGAATATGAGATGCTTACTAAGGTGACTGATACATCAGCTGCACAAGCTAGGA AGGGGAAGGATATTCAGGGTATTCCATGGGAGAGCTTGAACATAACCAGAGGAAGTTACAGATTGACAAGGCTTGAGCAG TATAGGAATTTTGAGAACATTCTTACATCTGGGGAAGCTGTTGACAAGGAATTGAAACAAATGGAGAAGGGTGGAAAATA CTTTGATTTCTCCTACAATACAAGAATGGTTAAGCCTACCATCCTTCATTTTCAGCTGAGGAACTTAGTATGGGCTACTT CAAAACATGATGTCTACCTTATCTCCAACTACTCAGTTATGCACTGGTCATCATTAAGTGGCAATTTGTCTGAGATAATC AATTTTGCTGGTCATGTAGCCCCTACTGAGAGACATGCTGGAAGTCAGTTGGAGGGATTTTCGCAGACCCAGATTAGCAC ATTGGCTGTCAAGGATAATTTTCTTGTCGCTGGTGGCTTCCAAGGAGAGCTTACTTGCAAGCGTTTGGATAAGAAGGGAG TAAGCTTTTGTACACGGACCACACATGATGATAATGCTATAACAAATGCAGTTGAAATATATGACAGCTTGAGTGGCGCA CCTCATTTTATAGCTGCCAATAATGATTGTGGTGTGAGGGAATATGACATAGAAAGCTTTCAGCTTTTAAATCACGTACA GTTCCCTTGGCCAGTGAATCACACATCAATCAGTCCAGATCGTAAGCTAATGACTGTTGTTGGAGATCATCTGGATGGAC TACTAGTGGATCCTCAAAACGGGAAGACTGTGGCCACTATGGTTGGTCATCAAGATTACTCTTTTGCATCTGCATGGCAT CCTGCTGGACTCACCTTTGCCACAGGGAATCAGGACAAGACTTGCAGAGTATGGGACGTTCGACGCTTATCGACCCCGGT TGCCGTTCTCAAGGGTAACCTCGGGGCAACGCGGTCGATTCGGTTTTCTTCAGATGGTCAATTCATGGTTGTTGCTGAAC CTGCAGATTTTGTGCATGTTTATAGTACAAAAGCAGATTACCAAAAACGTCAAGAGATTGATTTCTTTGGTGAAATTTCT GGGGTCTCTCTGAGTCCTGATGATGAGTGTATATATATAGGAATCTGGGACAGGACTTATGCAAGCTTACTACAGTATAA TAGGAGGCACTCAAATGAGTATCTGGATTCCTACTATTGA
Protein sequence (LotjaGi1g1v0531100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSYHDLYPFDQLAEEDFFDEIDDQNYGGGVADVGLDEYEMLTKVTDTSAAQARKGKDIQGIPWESLNITRGSYRLTRLEQ YRNFENILTSGEAVDKELKQMEKGGKYFDFSYNTRMVKPTILHFQLRNLVWATSKHDVYLISNYSVMHWSSLSGNLSEII NFAGHVAPTERHAGSQLEGFSQTQISTLAVKDNFLVAGGFQGELTCKRLDKKGVSFCTRTTHDDNAITNAVEIYDSLSGA PHFIAANNDCGVREYDIESFQLLNHVQFPWPVNHTSISPDRKLMTVVGDHLDGLLVDPQNGKTVATMVGHQDYSFASAWH PAGLTFATGNQDKTCRVWDVRRLSTPVAVLKGNLGATRSIRFSSDGQFMVVAEPADFVHVYSTKADYQKRQEIDFFGEIS GVSLSPDDECIYIGIWDRTYASLLQYNRRHSNEYLDSYY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 438 | 420 | 3.3E-247 | – | |
| PANTHER | 19 | 438 | 420 | 3.3E-247 | – | |
| Gene3D | 133 | 423 | 291 | 1.8E-24 | ||
| SUPERFAMILY | 185 | 419 | 235 | 3.39E-29 | ||
| SMART | 300 | 339 | 40 | 2.5E-6 | ||
| ProSiteProfiles | 307 | 341 | 35 | 11.912 | ||
| ProSiteProfiles | 307 | 391 | 85 | 13.343 | ||
| SMART | 343 | 382 | 40 | 1.7 | ||
| SMART | 386 | 427 | 42 | 360.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0531100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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