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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036322
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We have found 553 results. Now displaying 1 of 12 with 50 rows per page. This search has taken 8.236s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Transducin/WD40 repeat-like superfamily protein; TAIR: AT4G18905.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9P775|YBEG_SCHPO Uncharacterized WD repeat-containing protein C17D11.16; TrEMBL-Plants: tr|I1JJS2|I1JJS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0006700 LjG1.1_chr1 972091 977021 +
n.a. Transcriptional regulator sterile apetala protein, putative; TAIR: AT5G35770.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9FKH1|SAP_ARATH Transcriptional regulator STERILE APETALA; TrEMBL-Plants: tr|G7KEL4|G7KEL4_MEDTR Transcriptional regulator sterile apetala protein, putative; Found in the gene: LotjaGi1g1v0010400 LjG1.1_chr1 1286060 1290808 -
n.a. WD repeat-containing protein; TAIR: AT5G63010.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q55C80|DPH7_DICDI Diphthine methyltransferase homolog; TrEMBL-Plants: tr|G7KEH9|G7KEH9_MEDTR Transducin/WD-like repeat-protein; Found in the gene: LotjaGi1g1v0015400 LjG1.1_chr1 1984433 1987476 +
n.a. Protein transport SEC13-like protein; TAIR: AT2G30050.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O64740|SC13B_ARATH Protein transport protein SEC13 homolog B; TrEMBL-Plants: tr|D7UPN0|D7UPN0_LOTJA SEC13 family protein; Found in the gene: LotjaGi1g1v0024900 LjG1.1_chr1 2969565 2972454 +
n.a. Protein transport SEC13-like protein; TAIR: AT2G30050.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O64740|SC13B_ARATH Protein transport protein SEC13 homolog B; TrEMBL-Plants: tr|D7UPN0|D7UPN0_LOTJA SEC13 family protein; Found in the gene: LotjaGi1g1v0024900 LjG1.1_chr1 2970841 2971746 +
n.a. WD-repeat protein, putative; TAIR: AT5G08560.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26; TrEMBL-Plants: tr|A0A151U202|A0A151U202_CAJCA WD repeat-containing protein 26; Found in the gene: LotjaGi1g1v0046500 LjG1.1_chr1 6344117 6348822 -
n.a. WD-repeat protein, putative; TAIR: AT5G08560.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26; TrEMBL-Plants: tr|A0A151U202|A0A151U202_CAJCA WD repeat-containing protein 26; Found in the gene: LotjaGi1g1v0046500 LjG1.1_chr1 6344117 6355578 -
n.a. WD-repeat protein, putative; TAIR: AT5G08560.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26; TrEMBL-Plants: tr|A0A151U202|A0A151U202_CAJCA WD repeat-containing protein 26; Found in the gene: LotjaGi1g1v0046500 LjG1.1_chr1 6344117 6355578 -
n.a. WD-repeat protein, putative; TAIR: AT5G08560.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26; TrEMBL-Plants: tr|A0A151U202|A0A151U202_CAJCA WD repeat-containing protein 26; Found in the gene: LotjaGi1g1v0046500 LjG1.1_chr1 6344117 6355578 -
n.a. WD-repeat protein, putative; TAIR: AT5G08560.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26; TrEMBL-Plants: tr|A0A151U202|A0A151U202_CAJCA WD repeat-containing protein 26; Found in the gene: LotjaGi1g1v0046500 LjG1.1_chr1 6344117 6355578 -
n.a. WD-repeat protein, putative; TAIR: AT5G08560.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26; TrEMBL-Plants: tr|A0A151U202|A0A151U202_CAJCA WD repeat-containing protein 26; Found in the gene: LotjaGi1g1v0046500 LjG1.1_chr1 6344117 6355578 -
n.a. WD-repeat protein, putative; TAIR: AT5G08560.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26; TrEMBL-Plants: tr|A0A151U202|A0A151U202_CAJCA WD repeat-containing protein 26; Found in the gene: LotjaGi1g1v0046500 LjG1.1_chr1 6344668 6348119 -
n.a. WD-repeat protein, putative; TAIR: AT5G08560.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26; TrEMBL-Plants: tr|A0A151U202|A0A151U202_CAJCA WD repeat-containing protein 26; Found in the gene: LotjaGi1g1v0046500 LjG1.1_chr1 6349927 6355578 -
n.a. WD-repeat protein, putative; TAIR: AT5G08560.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26; TrEMBL-Plants: tr|A0A151U202|A0A151U202_CAJCA WD repeat-containing protein 26; Found in the gene: LotjaGi1g1v0046500 LjG1.1_chr1 6350520 6354340 -
n.a. F-box/WD-40 repeat-containing protein family; TAIR: AT5G21040.1 F-box protein 2; Swiss-Prot: sp|Q94AD8|FBW3_ARATH F-box/WD-40 repeat-containing protein At5g21040; TrEMBL-Plants: tr|A0A151U1T0|A0A151U1T0_CAJCA F-box/WD-40 repeat-containing protein family; Found in the gene: LotjaGi1g1v0057600 LjG1.1_chr1 8060351 8062862 -
n.a. E3 ubiquitin-protein ligase COP1; TAIR: AT2G32950.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1; TrEMBL-Plants: tr|G7KH91|G7KH91_MEDTR E3 ubiquitin-protein ligase COP1; Found in the gene: LotjaGi1g1v0067500 LjG1.1_chr1 9342364 9354793 -
n.a. Elongator complex protein 1; TAIR: AT5G13680.1 IKI3 family protein; Swiss-Prot: sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1; TrEMBL-Plants: tr|A0A072VRS1|A0A072VRS1_MEDTR Elongator complex protein 1; Found in the gene: LotjaGi1g1v0075200 LjG1.1_chr1 10855048 10859142 -
n.a. Transducin family protein / WD-40 repeat family protein, putative isoform 5; TAIR: AT5G05570.2 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|P38163|SRO77_YEAST Lethal(2) giant larvae protein homolog SRO77; TrEMBL-Plants: tr|A0A0R0LBL8|A0A0R0LBL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0076900 LjG1.1_chr1 11084521 11097330 +
n.a. Syntaxin-binding protein 5; TAIR: AT5G05570.2 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q5DQR4|STB5L_MOUSE Syntaxin-binding protein 5-like; TrEMBL-Plants: tr|K7KAS4|K7KAS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0076900 LjG1.1_chr1 11084523 11099601 +
n.a. Transducin/WD40 repeat protein; TAIR: AT5G05970.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|B3H5K9|NEDD1_ARATH Protein NEDD1; TrEMBL-Plants: tr|A0A0L9UWR8|A0A0L9UWR8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086200 LjG1.1_chr1 12482011 12490016 +
n.a. WD repeat-containing protein; TAIR: AT5G05970.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|B3H5K9|NEDD1_ARATH Protein NEDD1; TrEMBL-Plants: tr|A0A1J7HQG3|A0A1J7HQG3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086200 LjG1.1_chr1 12482275 12485058 +
n.a. Transducin/WD-like repeat-protein; TAIR: AT5G05970.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|B3H5K9|NEDD1_ARATH Protein NEDD1; TrEMBL-Plants: tr|I1JI29|I1JI29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086200 LjG1.1_chr1 12483367 12489228 +
n.a. Protein DAMAGED DNA-BINDING 2; TAIR: AT5G58760.1 damaged DNA binding 2; Swiss-Prot: sp|Q6NQ88|DDB2_ARATH Protein DAMAGED DNA-BINDING 2; TrEMBL-Plants: tr|I1MBA5|I1MBA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0121000 LjG1.1_chr1 19055314 19063396 -
n.a. WD40 repeat-like protein; TAIR: AT1G15440.1 periodic tryptophan protein 2; Swiss-Prot: sp|Q15269|PWP2_HUMAN Periodic tryptophan protein 2 homolog; TrEMBL-Plants: tr|A0A0S3RH52|A0A0S3RH52_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0124400 LjG1.1_chr1 19712311 19718515 -
n.a. Transducin/WD40 repeat protein; TAIR: AT5G50120.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|O48716|JGB_ARATH Protein JINGUBANG; TrEMBL-Plants: tr|I1KCK1|I1KCK1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0183900 LjG1.1_chr1 35903167 35906483 -
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|I1LA80|I1LA80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118110 42136073 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.6 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|A0A0R0HRJ8|A0A0R0HRJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118645 42134496 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.6 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|A0A0R0HRM1|A0A0R0HRM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118121 42134951 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|I1LA80|I1LA80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118155 42134931 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.6 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|A0A0R0HRJ8|A0A0R0HRJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118155 42134931 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|A0A0R0I0F4|A0A0R0I0F4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118155 42134931 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|I1LA80|I1LA80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118645 42131860 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|I1LA80|I1LA80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118645 42131860 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.6 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|A0A0R0HRJ8|A0A0R0HRJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118645 42131860 +
n.a. Transcriptional corepressor LEUNIG; TAIR: AT2G32700.1 LEUNIG-like protein; Swiss-Prot: sp|O48847|LUH_ARATH Transcriptional corepressor LEUNIG_HOMOLOG; TrEMBL-Plants: tr|I1LA80|I1LA80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0199000 LjG1.1_chr1 42118645 42134496 +
n.a. Eukaryotic translation initiation factor 3 subunit I; TAIR: AT3G15610.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q54LT8|STRAP_DICDI Serine-threonine kinase receptor-associated protein; TrEMBL-Plants: tr|A0A151S8K4|A0A151S8K4_CAJCA Serine-threonine kinase receptor-associated protein; Found in the gene: LotjaGi1g1v0201300 LjG1.1_chr1 42619433 42626906 +
n.a. Eukaryotic translation initiation factor 3 subunit I; TAIR: AT1G15470.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q54LT8|STRAP_DICDI Serine-threonine kinase receptor-associated protein; TrEMBL-Plants: tr|I1MUD8|I1MUD8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0201300 LjG1.1_chr1 42621024 42625937 +
n.a. WD-repeat protein; TAIR: AT4G33270.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q54MZ3|CDC20_DICDI Anaphase-promoting complex subunit cdc20; TrEMBL-Plants: tr|A0A151SFQ0|A0A151SFQ0_CAJCA Anaphase-promoting complex subunit cdc20; Found in the gene: LotjaGi1g1v0202500 LjG1.1_chr1 43022102 43025720 -
n.a. WD-repeat protein, putative; TAIR: AT3G42660.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|O13046|WDHD1_XENLA WD repeat and HMG-box DNA-binding protein 1; TrEMBL-Plants: tr|G7IT11|G7IT11_MEDTR Transducin family protein/WD-40 repeat protein; Found in the gene: LotjaGi1g1v0208800 LjG1.1_chr1 45784222 45789657 -
n.a. WD-repeat protein; TAIR: AT4G33260.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q9SZA4|CDC21_ARATH Cell division cycle 20.1, cofactor of APC complex; TrEMBL-Plants: tr|K7LIT2|K7LIT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0210300 LjG1.1_chr1 46004455 46009200 -
n.a. Transducin/WD40 repeat protein; TAIR: AT5G60940.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q8L4J2|CTF50_ARATH Cleavage stimulation factor subunit 50; TrEMBL-Plants: tr|G7IGS9|G7IGS9_MEDTR Cleavage stimulation factor 50 kDa subunit; Found in the gene: LotjaGi1g1v0212000 LjG1.1_chr1 46671896 46679818 +
n.a. Wd40-repeat-like protein; TAIR: AT5G60940.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q8L4J2|CTF50_ARATH Cleavage stimulation factor subunit 50; TrEMBL-Plants: tr|I1KD31|I1KD31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0212000 LjG1.1_chr1 46671927 46679742 +
n.a. Wd40-repeat-like protein; TAIR: AT5G60940.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q8L4J2|CTF50_ARATH Cleavage stimulation factor subunit 50; TrEMBL-Plants: tr|I1KD31|I1KD31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0212000 LjG1.1_chr1 46672115 46679348 +
n.a. Wd40-repeat-like protein; TAIR: AT5G60940.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q8L4J2|CTF50_ARATH Cleavage stimulation factor subunit 50; TrEMBL-Plants: tr|I1KD31|I1KD31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0212000 LjG1.1_chr1 46674780 46679348 +
n.a. WD40 repeat-like protein; TAIR: AT5G50230.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q6NNP0|ATG16_ARATH Autophagy-related protein 16; TrEMBL-Plants: tr|V7CBB8|V7CBB8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0230400 LjG1.1_chr1 53946822 53950510 +
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58727712 58733394 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58727712 58733394 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58727766 58733392 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58727813 58733358 -
n.a. Transducin/WD40 repeat protein; TAIR: AT1G78070.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03; TrEMBL-Plants: tr|A0A0L9UG10|A0A0L9UG10_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0244600 LjG1.1_chr1 58728128 58729529 -