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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0531800 |
| Transcript ID | LotjaGi1g1v0531800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional uridylyltransferase/uridylyl-removing enzyme; TAIR: AT1G69040.1 ACT domain repeat 4; Swiss-Prot: sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4; TrEMBL-Plants: tr|A0A151S7C7|A0A151S7C7_CAJCA [Protein]-PII] uridylyltransferase; Found in the gene: LotjaGi1g1v0531800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105896430..105900288) extracted from Lotus japonicus Gifu genome v1.2.
TCTAAAACCTCTTATAAAATGTGTAAAATTGATTTGGGGTGTTAATCTTTGTTTTGTGTTGTCGTCTGGGAAACTCTTGG TCCACCCTCACCAAATCTATCACCCAACCAAATTCCGAAGCCCCAAACACAAATCACAATCCTAATTCCGAAGGTACAAG GAAAGTGCAACAAACACACACACACACACACACACACACACACACTTTGTTATCTATCTATATATCACAATCACACCACA ACTTCACTCTCCTCTGTTTCTGTTCTGTTTTTGTTCTGTTTCACACACAACCCCATGGATTGTTGGTCCACTCCTCTGCA TCTGGATGATGAATTCAAGAAGCTTGTCATTCGCATGAATCCTCCGAGGTGACAATTTTCAAACAACATGTTCCTCCTTT CTCATGTTTTGTTGTTGTTCTGGAACTGAATTGTCATTTTTGTTGTCTTCTTTGCAGGGTCACTGTGGATAACACTTCAA ACAGAACAGCAACTGTGATCAAGGTGACAAATTCTGAATCTTTATGGATTATCTTTTCTGCATTGCAAAAGGGTCGTTTT GGTAGCCAATTTTCTGTGGGAATTGCAGGTTGATAGCGCAAATAGGCGTGGAAGCTTGTTGGAGGTGGTTCAGGTTCTCA CTGATATGAATCTCATTGTGAGAAGAGCTTACATTTCTTCTGATGGTGAATGGTTCATGGATGGTATGTTACCCTTCACA ATTCTTCTCAATTTCCCTTCAAATAATCACACCATTGTTGCTTTTGTGAACATGTGTTCCTCTAATCTTGTTTTCTATGG TTTTTCCCCCTTGACCAGTTTTTCATGTTACTGATCAAAATGGGAAAAAGTGTCTTGAAGATGATGTTGTTGATCGCATT CAACAGGTAGTAGATCTGCAAAACTAACTTGAAACATTTGTTGTATGCTTATATCAATTCATGTATAATTTAGCAGTGGG GTAAAGATTAATTTTAATCATTGTTGTCAAATAGTGGATATGGCGTAGCGCTTCGAGCACTCACCGTTATCCGTTATTTT CTGTACTGAGGGCTTGACATTGCGGATTTTTGGCTTTCTTGCTAGTTTCCGCAATCCGGTATTAAAAACACTGATTTTAA TTGAAATCAATGCTCTTATGATGTCTTTGTTCTGGTCAATTTTTCAAATTTCAGCTTATAATTGTGTGAATTCATGAACT TGAATTTGTGCTATTCAGCTTTTAGTCCTTAACCTTGGAATGGAATGGGAAATCAAAAACATGGGGAAAAGGGGGTAGTA ATGGAATTGAAAGAACAATTGCTTGGTTTTCTGCATATTACTCCAAGAAAGAAGATAATGCATGATTCTGTTTAAGATAT TTTTTTTCGACAAATCAAATCAATCACTAGATTGAGATAAAACAAGACAAAACAAGAAAAGAAGAACTAGTTTGTTTTCA AACTAGATTAGTACAATTTTGCTATTGCATGTCATTCTCTATATGAATTCATCTGAATTATTGAATGTGTACTTACAATT ATCTTTTGCTTGTTCCAGTCACTGGGTCCAAGAGTCCGTAGTTTCAGATCCATGAGAAGATCTGTTGGGGGCCAACCTGC ATTAGAACACACAACCATCGAGTTAACGGGACGAGATAGGCCAGGGTTGCTTTCAGAAGTTTTTGCTATTCTTGCAGACC TCAAGTGCAATGTGGTAGCAGCAGAAGTCTGGACCCACAATTCAAGAATGGCGTCGGTCGTTTACATCAATGACGAGACA ACAGGGTTGTCAATAGACAACCCGGATCGCCTCGCAAAGATCGAGCAGCTTCTGCTCTATGTGCTGAAAGGGAACATTGA CAAGAAGAGTGCCAACACTGCTGTTTCTGTTGATTCTACTCACAAGGAGAGGAGGCTGCATCAGTTGATGTATGCCGATC GCGACTATGACATATATGAAGGGGATTACATGGCAACAAGTGACAGGAACAAGCTATTTGTAACTGTTGATAATTTCATA GACAAGGGGTATACTGTTGTGAACTTGAGGTGTCCGGATCGACCGAAGTTAATATTTGATACCGTGTGCACAATCACAGA CATGCAGTATGTTGTGTACCATGGCACTGTCATTGCTGAAGGACCAGAAGCATATCAGGTTTGTCATTGATGTTGTTGGA ATTGACATCTGAGTTAGTATTTGTGTATGTTATAGCAACTTTAGGCTTTTACTTTAATCAGGATTTTAATTCGCAGTTGC GATTATATCACAGAATTACGCACGAATGTGGTTGATGCGGCCGCGATCTATGCCGTTGCAGGGACTAAAAAATGAAATTG GATTTGGTGCAGTAAAAAATGATGCAGTCATCAATCCGTAATCATTGGATGGAGATTGGAAAGCTTGAGTTTAAGTTCAT GTTTTAATTCTAATTTATTGCAATTGAAGTTAGACTGTCCGATCTTCATTCAACAGTTTTGATTTACTGACTGCATTGAT TGCACTCAATTTTAACTGCAACAAATCCAGGTCCCTCAAAAACCCTGTACTTTGCGGCCGCAATTGCAGTTGCTGACCGC AATTTAAAACCTTGATTATAGTAAGCTTGATTCCATGTCATGTTACTTGAGTTGAGAAGCCTATTCTTACCAATCCTTTC TATCAGCATGTTTTGTGGTTGCTATTGGAAATTAACGCATAATTGGAAAATTTGTGATATGTGCAACCTTGTAATTTAGC TTAAAGTAGTCCTTTTGAAGCTCTTTATGCGATTCTTACGATGAAAAATGCCCAAGCAAACACACTAGTATTCATCACTC AAATTACCATTAAACTTCACTAACATGTTTTGCCCGGTTCTACAGGAATATTATATAAGGCATATGGATGGATATCCTAT CAGTTCTGAAGCAGAAAGGCAAAGAGTGATTCGCTGCTTGGAGGCTGCTGTTAGAAGAAGAACTTATGAGGTACTACTAC AACACATGACCTGGATTCTATGCCACAAATTCTTGCAAAATGTATATCACTAACATGATTTAATTTTTATGCACCGTCAG TATTCAATCATATCTTGCTCGGTTTCTCTTTTGATATTTTCTAATTTTATTTATGACGTGACAAAAATAGTGAATTGTGA CTGGATGTACGTGTAAAACATTTTTTCACTGTCAATGCGTAGTTATTAAATTGACACTATTATTATTGTTACTTGTATTT GATATAGGGCATCAAGCTAGAACTATGTAGTGAAGACAGGGTTGGTCTTCTATCTGATGTAACCCGCATCTTTCGAGAAA ATGGCCTAACAGTGATCCGAGCTGAGGTTACAACCAGCAGTTCTCAAGCCATGAATATTTTCTATGTGACTGATGTATCA GGAAATCCAGTTAAGAGTGAAACAATCGAGGCAATTCGAAAAGAGATTGGCCTGACCATACTGCAGGTGAAAGATGATGG TGTGTGCTCAAAATCTCCACCCAAGGAGAGTGGAAAGTTTTCTTTGAGTCATCTCTTTAGATCAAGCTCTGAGAAGTTTC TCTGTAACTTGGGTCTGATGAAGCCTTATTCCTGAACCTGTTTCTATATGTTCTAATTTGTAAATAGCAGTTTAGTTTTC ACCTAGATTTGAAGCTTTGTGGTAGATATTTGTAGATTTGGTGTCGGTCTAACTTGTATTCAGGTGTCAAATTGTAGAGT TATACTAGGCATGTTTCTTTGAAAATATTTATCTTAATATGCCTTTGTTATATCCTTGTGGTCTCATTGCCTAATCCCTA TATATAGGGTTTTAAATTGTGGTTGCCGCTGCATCGTGGAATTGCAGACAATTGCGGGTTGATGCGGCTGCAATGCTGAT GTGGGGACTCCTTAACCCG
CDS sequence (LotjaGi1g1v0531800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTGTTGGTCCACTCCTCTGCATCTGGATGATGAATTCAAGAAGCTTGTCATTCGCATGAATCCTCCGAGGGTCAC TGTGGATAACACTTCAAACAGAACAGCAACTGTGATCAAGGTTGATAGCGCAAATAGGCGTGGAAGCTTGTTGGAGGTGG TTCAGGTTCTCACTGATATGAATCTCATTGTGAGAAGAGCTTACATTTCTTCTGATGGTGAATGGTTCATGGATGTTTTT CATGTTACTGATCAAAATGGGAAAAAGTGTCTTGAAGATGATGTTGTTGATCGCATTCAACAGTCACTGGGTCCAAGAGT CCGTAGTTTCAGATCCATGAGAAGATCTGTTGGGGGCCAACCTGCATTAGAACACACAACCATCGAGTTAACGGGACGAG ATAGGCCAGGGTTGCTTTCAGAAGTTTTTGCTATTCTTGCAGACCTCAAGTGCAATGTGGTAGCAGCAGAAGTCTGGACC CACAATTCAAGAATGGCGTCGGTCGTTTACATCAATGACGAGACAACAGGGTTGTCAATAGACAACCCGGATCGCCTCGC AAAGATCGAGCAGCTTCTGCTCTATGTGCTGAAAGGGAACATTGACAAGAAGAGTGCCAACACTGCTGTTTCTGTTGATT CTACTCACAAGGAGAGGAGGCTGCATCAGTTGATGTATGCCGATCGCGACTATGACATATATGAAGGGGATTACATGGCA ACAAGTGACAGGAACAAGCTATTTGTAACTGTTGATAATTTCATAGACAAGGGGTATACTGTTGTGAACTTGAGGTGTCC GGATCGACCGAAGTTAATATTTGATACCGTGTGCACAATCACAGACATGCAGTATGTTGTGTACCATGGCACTGTCATTG CTGAAGGACCAGAAGCATATCAGGAATATTATATAAGGCATATGGATGGATATCCTATCAGTTCTGAAGCAGAAAGGCAA AGAGTGATTCGCTGCTTGGAGGCTGCTGTTAGAAGAAGAACTTATGAGGGCATCAAGCTAGAACTATGTAGTGAAGACAG GGTTGGTCTTCTATCTGATGTAACCCGCATCTTTCGAGAAAATGGCCTAACAGTGATCCGAGCTGAGGTTACAACCAGCA GTTCTCAAGCCATGAATATTTTCTATGTGACTGATGTATCAGGAAATCCAGTTAAGAGTGAAACAATCGAGGCAATTCGA AAAGAGATTGGCCTGACCATACTGCAGGTGAAAGATGATGGTGTGTGCTCAAAATCTCCACCCAAGGAGAGTGGAAAGTT TTCTTTGAGTCATCTCTTTAGATCAAGCTCTGAGAAGTTTCTCTGTAACTTGGGTCTGATGAAGCCTTATTCCTGA
Protein sequence (LotjaGi1g1v0531800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDCWSTPLHLDDEFKKLVIRMNPPRVTVDNTSNRTATVIKVDSANRRGSLLEVVQVLTDMNLIVRRAYISSDGEWFMDVF HVTDQNGKKCLEDDVVDRIQQSLGPRVRSFRSMRRSVGGQPALEHTTIELTGRDRPGLLSEVFAILADLKCNVVAAEVWT HNSRMASVVYINDETTGLSIDNPDRLAKIEQLLLYVLKGNIDKKSANTAVSVDSTHKERRLHQLMYADRDYDIYEGDYMA TSDRNKLFVTVDNFIDKGYTVVNLRCPDRPKLIFDTVCTITDMQYVVYHGTVIAEGPEAYQEYYIRHMDGYPISSEAERQ RVIRCLEAAVRRRTYEGIKLELCSEDRVGLLSDVTRIFRENGLTVIRAEVTTSSSQAMNIFYVTDVSGNPVKSETIEAIR KEIGLTILQVKDDGVCSKSPPKESGKFSLSHLFRSSSEKFLCNLGLMKPYS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 449 | 442 | 1.2E-233 | ||
| PANTHER | 8 | 449 | 442 | 1.2E-233 | – | |
| SUPERFAMILY | 35 | 105 | 71 | 9.16E-11 | – | |
| Pfam | 37 | 86 | 50 | 1.7E-6 | ||
| ProSiteProfiles | 38 | 115 | 78 | 10.463 | ||
| Gene3D | 123 | 198 | 76 | 3.7E-10 | – | |
| SUPERFAMILY | 124 | 195 | 72 | 1.3E-12 | – | |
| Pfam | 126 | 174 | 49 | 7.2E-10 | ||
| ProSiteProfiles | 127 | 204 | 78 | 13.186 | ||
| CDD | 259 | 333 | 75 | 1.42046E-37 | – | |
| SUPERFAMILY | 336 | 404 | 69 | 4.96E-11 | – | |
| CDD | 337 | 408 | 72 | 7.40127E-37 | – | |
| Gene3D | 338 | 412 | 75 | 6.0E-9 | – | |
| ProSiteProfiles | 339 | 415 | 77 | 12.482 | ||
| Pfam | 342 | 402 | 61 | 7.3E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0531800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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