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LotjaGi1g1v0545000.1

Overview

Field Value
Gene ID LotjaGi1g1v0545000
Transcript ID LotjaGi1g1v0545000.1
Lotus japonicus genome version Gifu v1.2
Description Methyltransferase, putative; TAIR: AT1G66680.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q5JPI9|MET10_HUMAN Protein-lysine N-methyltransferase METTL10; TrEMBL-Plants: tr|A0A151TD67|A0A151TD67_CAJCA Protein-lysine N-methyltransferase KK1_019616; Found in the gene: LotjaGi1g1v0545000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:107430468..107435425) extracted from Lotus japonicus Gifu genome v1.2.

CACATCAGCAAATATATTCTTGTTTTAATTAAAATTTAAGATGAAAGATATTATTTCACTTATATGGCATGTTGTGATTG GTTGTCAGTGTAAAACTGACAGTGCATATCCATTAAACTCATAAAAATAATTGTTTACCAAAATGAAGAAAAGAATAATG ATGTGTGAGTGAATTCGATTTGATTCGAGAAGAAACAAAAACGGAAAACCGAGATCCGAAAGCCGCACCCGATCATTCAT TACGTGACAAATTCACTCACTCACTCTGAAGAGAAGACTGCAGTAGCAATAACAAACCACACTCACTTTCTCTCTCTAGC TTTCTCTCTCTAAGATGGCCGGAATCCGGTTGCAACCGGAGGACTCCGACGTCTCTCAACAAGTCCGATCGGTTTCCCTC TCCACCGCCGATCTCGTCTCCGACGACGACCGTTCCATCGCAGCCGACTCGTGGTCCATCAAGAGCGAGTACGGCAGCAC TCTCGACGACGACCAGCGCCACGCCGACGCCGCCGAAGCTCTCTCCAACGCCAATCTCCCTCCTCCCTCCGACTACAGGT TCCTTCCCTCTCACTCTCCGTTTTTGTACCTTTCGACTTCGAAATTTTGTGATTCGCGAATCGCTGCTTTGTGGAGCGTG ACTGAGTTTTTTCCTGATTATGTTGATTGCATTGTTTTGTATAATCCTTTGGTCTGTTAAATGCTGTCAGATTGTAGGTT TGAGAATTATGCATAAGGTGAAACTGAAAGTGAAATAGTATTCTGTTGATTGCATTGTTTTGCTTTAGTCATAGATTTTT TTTACTAGTTCTAGGGTTGAAGAGAGAGTGAGGAGGTGAAGTAGAATGTTAAGATCTAGTTCTGTATTTGATGTTGGCTG CTAAGTAATGTATGGATCTGATTGAATTTTAGCTATGCAGGTTTTGGAATTTGAGATTACCTTTGAGTATTGGGCAAGTT AGTGAATTGTGACTGTTTTTTATTATTATTGAGCGAGTTATTCTTGTCTGTGCAGCTCTGATAAGGAAGAACCTGATGCT GAAGCAGTGGCATCAATGCTGGGGTTTCAGAGCTACTGGGACGCTGCGTACTCAGATGAGCTCACAAATTTTCGTGAACA TGGTCATGCTGGTGAAGTTTGGTAAATAATATTTTGATTGCATAACGTGGAGATTAATTTTTATTTTAAGTGGTAAAGAA TTTTTCTGCTTTTGTTTATGCCACTTCAATTCCTGCTAGGAGTCAAACCTTGTATAGGCTTTTTGATGAAAAAAGTGGTG TGGTAGGAATGACTTTCCCATGTTAAGAAGGACCGATGAGTATTTAATGTAGAAGTAAGATGAGAAAATGAGTTTGAAAT CTCATCTAAGATTAATTTATACTTCAGGTTTTGGGTTCCTCTGCTTTAACAATGAGTGGGAAATTATGTTGTTGGGATAA ATACGTCATATATGCCATTCTAACCTCTAAATCAGAGACTGTATTCCAGTATTCCTTTTAGAGTAGAGGACATGAGCTTC ATCTTTGCTTTTCATTCTTTAAAGTTTATTTGGATTTATCAATTTCTAGACCATGATGAACATTTGCATCATAGGCAATT GTTGGAAATGATACATTCTAAAGGTTTTCGTAGCAAATTGTTTACATATAATTTATTTATTTTTTGCTGTTATTTTGCAT CTTTGTAGGTTTGGAGTTGATGTGATGGAAGTAGTTGCATCTTGGACTAGGGCATTGTGCATTGACATTTCTCAAGGCCG GTTACCAAATCATACTGATGATGTTAAGGCTGAAGCTAGTGAATTAGGTGATAAAATTTTGTCTAGTTGGAGTGTACTTG ACATTGGGACTGGCAATGGTTTGCTTCTCCAAGAGTTAGCTAAACAAGGGTATGGTTTCATCTTTTATCCATGTATTTTT TGTAGTATAGGCTGTGAATATAAAACAAATTCCTCTGCATATAAATCCATTATCTTTCTTGACTTAGTTTTGCTCCAACA TTATCTCCTCTTTTCTCTTAACTACACAAAGTTGTGTCCATTCCCTCATCTATTTATTGGGATACAAAAGGCATATTAAT CTTATTCCAAATAAATGTGCGCGCACATAAATATAATTGGATGTTAATTTTTCAGAGAAGCATAACTTGTATAAGTCATA AATACTATATATCTAGTTATTCATAAAAACATGAAAGTTGTAATTCGTACTTGAATTAATATAGGCTCATGGTCATGCAT ACCAGTGAAGCTACGAGGATAAGAATTTTCTGTATAAAAATATCTATGTTCAAAAAAATCATTCGGCTGATTCAAAATGG GAAGTTAGGAATATGGCAATATGCAATAGTCGGGCTAAGAAAGAAAAGAGACACCTTTCCTTTATTCATACTGTTTAATT TTAGGGGGAAAATGGATTGCTTGAAGCTGCCAGACTGCATGTAGATTGAATTGTGCTTTACTGGCATATTTGAAATTTTA TGTATCTTCTAGGCATTATCCAGATAATACATTGAAAGGAAGATATGTAAACAAGGATGAAAACTAATGCAGCTTCAGAA AATAAACTCTTTGCATCTGTTTTTTTATTGTTCCTTAGAATGTAATCAAGCTTTTTTCAGTCTTTAGTTCTTTGGTGATG GAAAGATATTTGCACTTATTTAAGTCGTATTACTCCAAACTCCATACTAAATAAACTCTTTGTATCTGTTCAGGTTCTCT GATTTAACTGGTACTGATTATAGTGAACAGGCCATCAGCCTTGCCCAAAGCCTTGCAAATCGTGATGGATTTTCCAATAT CAAATTTGTGGTACGTTCAAGTTTTACTATCTGTGCGTGTGGGTGAGCATTTCAGTATATTTGTTTGTCTCTGTACTTCT CTGTGTAGCCCATAGGGGGGTTGCTTTTCATAGTATCTGAGCTTATTCGATAGTTTAATTGTTGTTACTTATTTGCACTG TTAAAAATAAGGTTTATCCACTTTTGGTTTTGTGGTGGCTTGGCTCAAATCACTATGTTCGAGCAAGAGTAGCATTTAGT TACATTTGCCAAAATGAAGATTTGAGAGGAATTTGTTCTCCCACAGTTTGCTATAAATTTATACCTTCTCTCTTTAATTA TTATTATTATTATTTCTATTACTATTATTATAATTTAAAATTAACATTAGTCTTTGTAATATGACATGTAAAAGTTGTTT TACCTGACGATATTCAAATAAAATTATACAATTGCTTTGTCTATGAAGTAGAGACATGAGTCATGACATAGGACGAGGTT ACACCAAGTTGCACATTTAACCATCATTGATATGTAAGCATGTCTATTTCGTGCAAAACACATTGATTCTTGACATTTCC AATACATAATACATTGGCTTTGATTGTTTTAAGGTTGATGATGTCCTTGAAACAAAGTTGGAACAAGAGTTTCAACTTGT TGTGGATAAAGGGACACTAGATGCTATTGGATTGCATCCTGATGGTTCTGTCAAGAGGTAAGAGAAAGTTACCCTCTTAT CTGTGATTCTGTCAAACTCTTTTGGGATGATGTTTCTTTGCTTTATAGAACTAATGTTTCACATTTCCTTCACACTTACT AATATTTTTCTCCATATAATTTCGTGCTTGCAATTTAAGGAATTGTGTTGTTGCTTTATTATTTTCAGAATGATGTATTG GGATTCTGTTGCAAAGTTGGTTGCTCCTGGTGGTATACTTGTAAGTACTTTTGAAGTTATTAATACCTAATATAGTAATG TTGACTTTAAGGCTCATGTTTTAATTTTCTACCAAGTATTTGGGGCTTGTGGCATGAAGTCTTGAACTTTGCCTATTCCA GGAAGTCCTTTTATCCAATACAGAAATCATGATTATTTGATCTTGTTTCCTTCTCTTCATTTATGCATACTCTCTTTATA TCTTTCCTCCAACCTGCTTTGCTCATGATAGTTGCAGATTTACAGCTCTTCTACTTTGTTAATTTTTTCCTTTTTGACTT TCTCCTTGTATGTTGTAAGGTGATCACATCATGTAACAATACAAAGGATGAGTTGGTACAAGAAGTGGAAAGTTTCAACC AAAGAAATCATGCTGAGGAATCATGCAGAGATCCCCTGTTTCAATACGTAAGTCATGTCCGCACATATCCGACATTCATG TTTGGTGGATCCGTAGGCTCCCGTGTTGCTACTGTGGCATTCCTTCGGAAATGAAATGCCTGCCATTTTACCCTCATGAT TTAGGTCTTTGGTGAACGGGTTTGGGATTGTGTGTCTGTGTAGGTAGATGCATCCTAACTTTTAATGTTATGTTAGTGTC AAACCGTAAATATTTTTCTTATCTGTGTGGTGGTAAGTTCCCTCACCCTTTCTTTTGGGTGAGTAGTTGTGAATCATTCG GAGTTCATAAACAAAGGAAGGAAAAAAGAGAGTTCAGCTTGGCATAAAGTTATTTTACTCCATTTCTGTTTGTGGATGTT ATTACAATGTGGGGCAATCTTTGAAAAAACCGTGGCTCTCCAAAGTGGTTTATAAGGTTCCTTTAAAGTTTAAAGTGATA TTGTCTCTAAATTAAAGTTATATATGCTGCTGACCTAAAAAATAAAGTTATATATGCTGTTAACGGAGAGAAAATAAGGG TAGAAGTAAAAAATAATGTGTGATTCGCATCAAAGTTATCTCCTCGAGTGGTTGGGAAAATAATTTCACATTTTTAATTT ACCGTTTAAATTTCCTTCTTGCCTAATATTAGGATTCTCCTTTTCCTATCCAGCCAACCAGATGTGGAAAGAAATTTCAA GTTTTCTCTTTGTTGTCTTTTAATTTTTCTTACTTCATACAAGCTTGCTTTCTTTCCTCCCTACATAGTTCCACATAGGG GTGTTCGCGGATTGGATTGGATCGGTTTTGAGGAGAAAAATCATCCGATCCGATCTCATCGGTTTTATGATTTTGCCA 

CDS sequence (LotjaGi1g1v0545000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCGGAATCCGGTTGCAACCGGAGGACTCCGACGTCTCTCAACAAGTCCGATCGGTTTCCCTCTCCACCGCCGATCT CGTCTCCGACGACGACCGTTCCATCGCAGCCGACTCGTGGTCCATCAAGAGCGAGTACGGCAGCACTCTCGACGACGACC AGCGCCACGCCGACGCCGCCGAAGCTCTCTCCAACGCCAATCTCCCTCCTCCCTCCGACTACAGCTCTGATAAGGAAGAA CCTGATGCTGAAGCAGTGGCATCAATGCTGGGGTTTCAGAGCTACTGGGACGCTGCGTACTCAGATGAGCTCACAAATTT TCGTGAACATGGTCATGCTGGTGAAGTTTGGTTTGGAGTTGATGTGATGGAAGTAGTTGCATCTTGGACTAGGGCATTGT GCATTGACATTTCTCAAGGCCGGTTACCAAATCATACTGATGATGTTAAGGCTGAAGCTAGTGAATTAGGTGATAAAATT TTGTCTAGTTGGAGTGTACTTGACATTGGGACTGGCAATGGTTTGCTTCTCCAAGAGTTAGCTAAACAAGGGTTCTCTGA TTTAACTGGTACTGATTATAGTGAACAGGCCATCAGCCTTGCCCAAAGCCTTGCAAATCGTGATGGATTTTCCAATATCA AATTTGTGGTTGATGATGTCCTTGAAACAAAGTTGGAACAAGAGTTTCAACTTGTTGTGGATAAAGGGACACTAGATGCT ATTGGATTGCATCCTGATGGTTCTGTCAAGAGAATGATGTATTGGGATTCTGTTGCAAAGTTGGTTGCTCCTGGTGGTAT ACTTGTGATCACATCATGTAACAATACAAAGGATGAGTTGGTACAAGAAGTGGAAAGTTTCAACCAAAGAAATCATGCTG AGGAATCATGCAGAGATCCCCTGTTTCAATACGTAAGTCATGTCCGCACATATCCGACATTCATGTTTGGTGGATCCGTA GGCTCCCGTGTTGCTACTGTGGCATTCCTTCGGAAATGA 

Protein sequence (LotjaGi1g1v0545000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAGIRLQPEDSDVSQQVRSVSLSTADLVSDDDRSIAADSWSIKSEYGSTLDDDQRHADAAEALSNANLPPPSDYSSDKEE PDAEAVASMLGFQSYWDAAYSDELTNFREHGHAGEVWFGVDVMEVVASWTRALCIDISQGRLPNHTDDVKAEASELGDKI LSSWSVLDIGTGNGLLLQELAKQGFSDLTGTDYSEQAISLAQSLANRDGFSNIKFVVDDVLETKLEQEFQLVVDKGTLDA IGLHPDGSVKRMMYWDSVAKLVAPGGILVITSCNNTKDELVQEVESFNQRNHAEESCRDPLFQYVSHVRTYPTFMFGGSV GSRVATVAFLRK 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 135 135 2.5E-99
PANTHER 1 135 135 2.5E-99
MobiDBLite 63 82 20 -
Hamap 82 332 251 27.326
Gene3D 91 309 219 2.9E-32
SUPERFAMILY 146 291 146 5.37E-25
PANTHER 159 331 173 2.5E-99
PANTHER 159 331 173 2.5E-99
Pfam 165 289 125 1.5E-20
CDD 166 271 106 7.86421E-13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0545000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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