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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0560300 |
| Transcript ID | LotjaGi1g1v0560300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pollen Ole e 1 allergen and extensin family protein; TAIR: AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein; Swiss-Prot: sp|Q6NMJ2|OLE96_ARATH Pollen-specific protein-like At4g18596; TrEMBL-Plants: tr|I3RZC8|I3RZC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0560300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109250801..109256064) extracted from Lotus japonicus Gifu genome v1.2.
CTCAAGACACCCGTTGTGAGTCTTTGATTTGATGATTCATTCACACATTAAAATGTATTTTGCTCAGGACAGCATTAAAA GTGGCAGTTGAGAGTTAGAAAAGAGTGCATTCAACAACTATTTAACTACTCATGCCATTCTCATCTTACCAATCTATTTC TTTGTTATATGCTTTTGCATTTGCCTAGTGAGGTTCCAGTATTCATGGAGTACTTGCCACAGAAGCTTTTCATTGCAGCA TTTCTCATCCTTTCAGCACCTATTCATGGAACGAAGGCAGATACCATGGTCACTGGCACTGTCTTCTGTGACCAATGCAA AGATGGGCAGAGATCCCTTTTGGATTATCCTGTTAATGGTAAGATCTAAGTCTCTCAACACTTTTTATCTAAGTACTTCA ACATTTTTGTTCTTATAATCCTGACCGTTCTTGGAAGTAACTAAAGGTACACCGTCATACCAAACATTCTGTGTTCAAGT CCGGGTGCTATTCAAGTAATATGAATTATGTTCTGAGAAGTGTTCAAATCTGATTTTTGCAGAATACAAATGGCATTGAT TCACATATCCCACTTCACTTTAATATATATATATATATATATATACACACACACATATATCCCTTGTATGTATTTGAATA CTGATTAAGTGTAATGCTAATGAACTTCTATTCCAATTCCAATCCATAAGAAGAGTTTACTTTTTATTTTGAAATGTGTA TTAACATTGATGCCAAGAGATTGTTGTTGTTTCTCTTTCAGATTGGCAGACTTTTTATCTCACACATTCATAGGTTGAGG TGAAGGAAATTTTATTTACTTGTTGCAAAAAATAGTTGGCTAACCCACTAATAAAATACTCCCTCCGGTCCTATTTATAA GCAACAAAAAAAAAATTCACATAGTTTAAGAAATGTAGTTAAACTAGATAAAATGCATTAAATTTGTCTTAAATTAAAAT GAACTTCCAAAATTACCCTTTGTTATTAGCGTTGGAAAGTGGAAAAGAGAGAGAATAATTAATGAGACACATTTTACAAG TTAGAATTAATAAGGGCATCATTGGAAAAAATTAATTAATATAGCTCAAACTTTCATTTGGTTCTTATAAAAAGGACCAA GATTTTTCTTCTCTTTCATGCTTATAAATAGGACCGGAGGGAGTATTTTCATCTCTAACATTTATGAAGTACGTGAGATC AACTAATTAAAGCATTGACAAGTAACATTTTTCTTACCTTTTCATTCTCTCAATAAATGGAGTCTGAACAGGTGGCCAAC TAGCCCTCTAGATGTATTTAATAAAGTACTGTTTGGCCACCGCCTATTTATTTATAACATATTCTGAAAATTGCTTTTTG ACCAAAGTTATTTATGCCTTGCACCCTGTTGCTTCTGGTTACAGGTGCAAAAGTAAGCTTGTCCTGTGCTGACAGCAATG GGCAAATCACAATGTCAAGAGAGGAAACAACTAACATGTTTGGAAGCTACATAATGAGGTTTGATGGTGCACCAGACTTG GGTGGTTGTTCTGCCATTGTATCAGGCAGTGGGCAAGGTTCAATGGATTGTGGTGAAGGTGCTGGTCCTGCCCAAAATCC TAGACTCATGTTCAGGATGTTTGACATGGAGATGTACACGGTGGATCCTCTACTTGCTCAGCCAGCACAGCCTATGCAAT TCTGCTCAAGATCTTCCGATTCCAACCCGGTGCCGCCGCCAGTCTCACCACCAAAGTCTCCCCCACAATTCAACCTACCT CCAATGCCCGGGCTTCCACCACTGCCACCATTGCCTCCACTACCACCATTGCCTCCACTACCACCAGTGATTTTCGCAGA AGCTTCAGCATGCTCATCAGAGTAAGTTTTATGACATTGGGGACAGTATTCAGCTTCCGGTAGTAAGGGGTTAATTACAT TCTAATGGTTGTTGAAACATGAAATCAATGGGACCACACCCTTACCACCTGCATAAATGCAAGGCAAAGTAGGGTAAATG AAAGCAACACTTATCAGAGTTGCATTGCCACTACTGATCAGCATACAATGTAGTGTTAAAGAAAAGAAAAAGTAATCAAG TATTTGAATTGGCAAAGGGTTCATGGTTTCATGAAATCTATGCCTAACAAAGTCCAATTCTTGCTATGGAAGTCATGATA TTTGTTACTACCTATATATATTGAATTGCATGCTTCCTTGTACAAAATGAGGACTTTGATAAATAGGTTTATTTACAAGA ATGTCAATGTTTTCTAAATTGTCAGGAAGTGGACAATGCCAGAATACAAATGCTACTGGAGGGGTGTGAACCAGGACACT AAAGTTGCAGTAGCTTTTGGAATGGTGGCAGCAAGGAGATACGGAACAGACATTACACTGTGGAAAGGGTTGCAAGGGAG AGGAGACCCTTACAGGACTCTTTTGAGAGAAGGGATTACTGCACTTCTTAACTCTTATAACACCCTCCAATTCTCTTACC ATCCAATTGGCGTAGTTGAACACATGAATGAGGCTTTGATGGGTTCAACTAGGAGTGTCCTGCTCACTGCTCTGCGCTTC AAGAGGTCTAATTCTGGTGCTGGAAATGTCACCTGCAAATTCACGCCTTGCAAATAATCTATAGCCTTCTTAGCATGTTT GGAAGATGGTTATTTTGGGGGTAATATTTATTTTAAAAGCTGCCTTATGAATATATTGATTATAAACTTTGGACCCTAAA ATAAACTAATCCAAACAAGCAACTAGAATACTCAATCTTGTTATATAGCTTTTGTCATTATCTTTACTGTATAAATGGCG ATTTGGGGTGCATTGAATGGTTTTGTAACTGAGCTGCATTTCTTCGTTATAATATATATGTACTGTTTTTTAAGATAGTT CTTACTTGTTCCAGAATCTGAACGCCTCCTGAACCTGTTTTGTTAGAGTAGTGAATAATTCAAACTTTAGAAAGCTAGAC TTCAAGCATTCGGCAGTAGTTCATGCCTTCAGCAAGATTTAATGAACAAATTTCTTTGCGAATGGAACTTATCTATGTCT CCCCTGCATTAATTTTTCTTCTTCTAAAAGACCACATATAAGACATACTCAAGCTTAACTAACCACTATGGGAGGTAAAA CACTCCCTCATAATATTTAATGCAAGCTACATACCTGAGCTCAATCTACTACAATTTATACGTTTGAACTAATGATTCAA ATCATTCGTCTTGTTGACCAAAAAACCAATTACTTATTTGCTTCTACACCGCCTCATGTTTCTCCACTTGTCCTTCAAAT CACCCTGACAAAAGTAATTTGATTGGCATCAAATGCATAAGTTTAAAAAGAAAATGTCAGTATACACCAAAAAAGGAAAA TAATAATAGGCTTACATCAGTTCTCCTTTCAAATACATCTTTGTGAGCATTTAACATTAATTTCCAGTTTCCTATGCCAA ATCTGAACAAGAGAACATGACGAAACAAAGAGTTTCACACTGCATCAAACCTATTCTCTTATCAATCAAAACTAAACAGA CAAAGAGTTCAAATTTGTGTCCTGAAATAGACAATGAAAATTTAATATTGAAGTTAGAACAACCACATACTTATTTACTG CTTTCTCTAGAGTTTCTTCTTCCAATTGACTCCATTTTCTTGTTGTTCTCCTTTTTATAACATTTCTTGGTTCATACTTC TTTAAAGGAGAAACTCTCTTCCTCTTAGGGCTAGGCAACTGAGGACGATTTGATGTCTCCCCCTGTAAGTCATCTATCAA TAGCTAATATACTACTTTAAGAGTCACATGGAATCAATCACCAGAATAAGAAGTTACTAGCATGGTTACCTCATGAGCAT GAGCATTTGTAGTTGTTGGTGGAACATCGCTCTGACAAGTTGTTGACGGATCCATTTCCTCAACAACATTAGTAATGCAG ATGTCGTCAAGCAGAAGATTACCCTCTTGAGTTTCTATTGAAGACAAACATAATGAAAAAATCAGTTGTAATTAAAAAGG GCTAATAGCAATGCTAGCTAATTTTGTGTTTCCAACTTGTGTTGAACTGTTGATAATTTATAGTGTGAATGAAGATTCCT AGCAATCAATATCCAAAGCTCCTAAATGGAGCTTTCTCTTCCTACTCAACCACTTAAATAGGTGTATCCATACACCCAAC ACTGTCAGCAGTAACAAAGACCAGGAACTAGGAAGCCATCTTCCATGTTTTGATCAACTTATTTTCTCTTAGAATCAATT ATGACACTTATAAGTTACTCACATTAGCTTCTCTCCATAATTGATTTTGATTGTAAAATCAATTTTAGGAAATTTTCCAA ACATGCTAAATTCAACAAATACACACAGATTCTAATTCTTGTAGTGAACTGAAATAGAGGCAAAAAAGGAAAGGAGTGAT CAAAGAACCTCTCTGTTGCTCTTCAGCAGCATCCGTTGCCGCATTCTCCACAGCGAGCTCAAGAAAAGAAGGGTCCACGC CTTCCCACAACTCTGCGAAAAAAACCTTGAGCCGGTTAATGGCGACGCTTCTGGTGTTCTCGGTGGCTGCCAACCGATCC CTTACACAAGGATCATTCAGTGAAGCCTCAATGTCAATTCTCCACCTATCCAACTCGTCGGAGAACAAGAGGCTTCGTTT TTCACCACCAGGCGAGGGTTTCATGTTCATAACCCTTTTCCACCATATTGTCTTGACAGAATCAAAGTAACGAGGAATAG ATCCTTCCAGTTTGATGTACTTGAGGGTGCATTCCACCGCCACCGCACAATAGGCGGCGGTAAAGGAGGCACTGACGGGA GAGCCCTCGGATCGAAGAACTTCTTCGAGGATCTCCATGATTTCGAGCATGGATTCATCGATTGACTCAATCTGCAGCCT CTCTTGAAGGATTCTGAGGAGAAGGGACTTGATGAAGTAGGAATTAGGGTTGGGAGGAACCTTGATTGTGCGAATGATTT CTTGGATTAGGGTGTTGTTTATGATTCGCTTTCCGATGAAGAACTCCAACGCCCAGCGTCCAGTATCGCCGTCCATTTTC GACTTCTCTTACAAGCTTCAACTGATTCTCTCCGCTCACTGTAACTACAGCAACCGCGATTTCGTTTCTACGAAGTTGGA GAATTGAATTTACAGGGTTGAAATTTTTGAAAAGAAAGGGGAAGACGAAGCGGGAAATTGGGAAAGGCGGGGTGAAAGGT GAATGATGAAAAATGGTGTGAATTGAAATTTATTTTTCTTTTCTTTCAATTTTAAATGGAAATG
CDS sequence (LotjaGi1g1v0560300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTTTGCATTTGCCTAGTGAGGTTCCAGTATTCATGGAGTACTTGCCACAGAAGCTTTTCATTGCAGCATTTCTCAT CCTTTCAGCACCTATTCATGGAACGAAGGCAGATACCATGGTCACTGGCACTGTCTTCTGTGACCAATGCAAAGATGGGC AGAGATCCCTTTTGGATTATCCTGTTAATGGTGCAAAAGTAAGCTTGTCCTGTGCTGACAGCAATGGGCAAATCACAATG TCAAGAGAGGAAACAACTAACATGTTTGGAAGCTACATAATGAGGTTTGATGGTGCACCAGACTTGGGTGGTTGTTCTGC CATTGTATCAGGCAGTGGGCAAGGTTCAATGGATTGTGGTGAAGGTGCTGGTCCTGCCCAAAATCCTAGACTCATGTTCA GGATGTTTGACATGGAGATGTACACGGTGGATCCTCTACTTGCTCAGCCAGCACAGCCTATGCAATTCTGCTCAAGATCT TCCGATTCCAACCCGGTGCCGCCGCCAGTCTCACCACCAAAGTCTCCCCCACAATTCAACCTACCTCCAATGCCCGGGCT TCCACCACTGCCACCATTGCCTCCACTACCACCATTGCCTCCACTACCACCAGTGATTTTCGCAGAAGCTTCAGCATGCT CATCAGAGAAGTGGACAATGCCAGAATACAAATGCTACTGGAGGGGTGTGAACCAGGACACTAAAGTTGCAGTAGCTTTT GGAATGGTGGCAGCAAGGAGATACGGAACAGACATTACACTGTGGAAAGGGTTGCAAGGGAGAGGAGACCCTTACAGGAC TCTTTTGAGAGAAGGGATTACTGCACTTCTTAACTCTTATAACACCCTCCAATTCTCTTACCATCCAATTGGCGTAGTTG AACACATGAATGAGGCTTTGATGGGTTCAACTAGGAGTGTCCTGCTCACTGCTCTGCGCTTCAAGAGGTCTAATTCTGGT GCTGGAAATGTCACCTGCAAATTCACGCCTTGCAAATAA
Protein sequence (LotjaGi1g1v0560300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLHLPSEVPVFMEYLPQKLFIAAFLILSAPIHGTKADTMVTGTVFCDQCKDGQRSLLDYPVNGAKVSLSCADSNGQITM SREETTNMFGSYIMRFDGAPDLGGCSAIVSGSGQGSMDCGEGAGPAQNPRLMFRMFDMEMYTVDPLLAQPAQPMQFCSRS SDSNPVPPPVSPPKSPPQFNLPPMPGLPPLPPLPPLPPLPPLPPVIFAEASACSSEKWTMPEYKCYWRGVNQDTKVAVAF GMVAARRYGTDITLWKGLQGRGDPYRTLLREGITALLNSYNTLQFSYHPIGVVEHMNEALMGSTRSVLLTALRFKRSNSG AGNVTCKFTPCK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 37 | 37 | - | – | |
| PANTHER | 17 | 328 | 312 | 1.3E-133 | ||
| PANTHER | 17 | 328 | 312 | 1.3E-133 | – | |
| Phobius | 20 | 30 | 11 | - | – | |
| Phobius | 31 | 37 | 7 | - | – | |
| Phobius | 38 | 332 | 295 | - | – | |
| Pfam | 41 | 109 | 69 | 4.0E-10 | – | |
| MobiDBLite | 155 | 188 | 34 | - | – | |
| MobiDBLite | 165 | 188 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0560300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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