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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0564700 |
| Transcript ID | LotjaGi1g1v0564700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ, putative; TAIR: AT4G39150.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|Q8GYX8|DNJ10_ARATH Chaperone protein dnaJ 10; TrEMBL-Plants: tr|C6TI60|C6TI60_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0564700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109798802..109804071) extracted from Lotus japonicus Gifu genome v1.2.
GAGAAAACGAATTGAAATGACCAATGAATAGAAAGAAACTAAACAGAACACGAGTTTCAGAACTGAATTGAATTACCAGA AAATAACAGAGATCCTTCTTTCATGGCCGTGTCGTCGCGGCACAATCATTTACCTATGTTCAACACAGCGTCGTAATGCT AACTGGTTCTTCATTGGTTTATTTTCCTAGTTTTGGAATTATGTATTGTGATTCGAATATCAAACCATGGTGAAGGAGAC AACGTACTACGACATTTTAGGGGTCAACGTTGATGCATCCCCTGCAGAGATCAAGAAGGCTTATTATATCAAGGTAAAAC CCTTCAATTCTGATTTCTCAAAGAGAATAGGCAAGTGATTCTATAATGCTATTAAATTTTCCAATCTGGTGAATATATAA AATTACAGTAATGCACGGTTGAAGCATTATGATTTATGAATCTGGCTTAATTTTGTTCATGGTGGGAGATGTTAAAGCTT TTATCATTTAATAGAACCACGTATATGTTTCCCTTGTAAACATTTGCTTTAGTTTGAATTATTACCAATTTTGATCTCAA TAAGCGGCTATAGAATGAACATTGAACTCTTAAAAGTTGTATAGTGATATTATACCACTTGTAAACGTCTCCACCAGACA GTTAAGCCATTGGTATAAAAATACAATCATGTCACCAATCATGAGCTTTAACTTGATATCTTATGGATTGGGAAGAATTG ATTCTTGATATTGTGTAACCTCTCTATTGTTACCAACAAATTGTTGCTTTGGCACCATGTCTATGACCAACTTTTCTGCT AAAAGCTTAAGCCATTAGTTGAAGGCTCATGATTGGTTTTATATCTAGCATTGGTGTACTGTTCTTCATCAAAGAGCCAA TCTGCACAGATAATACTGTTTCCATTATTTTTCTTGCTTAGAACTTATGATTTTTGTAGGCCATAAGGAAAAGTTTGTTA AAACTTTTTTGTTGGAAAGGAAAAAAATGGCTCTCTTCTGCTTGCTTTTAGATTCAACATTTAGAAAGAGTGAAACGTGA CTTTTATGCAGATGGTTTCCTTTCTCTATTTTCCTGACTGACTCGTTGATTTTTTCCACTTGAAAATTGCTTCCTTTGGT TCACTTTGATGAGTTGTGATATATCTCCTGCCTTGCTTCTCTTTTATTTCCTTTGCAGGCTAGGATAGTTCACCCTGATA AAAATCCAGGAGATCCCAGGGCTGCAGAAAATTTTCAGGTAAGCATTATAAGGCGTAGGAGTATTTTGCTTTTGGATTTC TTTCCCCCTTTAATTTGCTTCACTTTTCTCCCACATTCATATTAAAAATATGGAATTTATGCACAGATACTTGGTGAGGC TTACCAGATTTTGAGTGATCCCAAGAAGCGTGAAGCATATGATAAGCATGGAAAGGCAGGGTTACCACAGTAAGTCAACA CAACCTTTTATAACTTAGTAGTGATTAACTAGTTATAACTTGCGAGTAAACTCAATGAAATGGTCAAGTTTTGTTCTTAC TCCTTGATGATTTTTTTTTATCCTTAGTTAGAAAGTGGTTTGGCCATGCCAATTATGTTAATGTTAGTGTAACTGGTGAA ACTTTTTCAAACAGTTTTTTTGAGCATTTTGGTTAGAAAATAACAGTAATTTGACCTAGAGATGCCAGATCTGCGAACTT TTTTCACTTTTTAAGCCTTTGAAATTATAGTTGAGACAATATATAGGCTATGTTTGGCATGCCATTTCAGCTAACTTATA GCTTATTTGACTAGCTTAAAGCTTATTTGACTAGTTTAAAAGCTCTATAAAAGTGTTTGGCGAATGAGCTTATTTCAGTA GCTTAAAGCTTTAAGCTATAAGCTATCTGAGGTAGCTTATAGCTTAAAGCTTATAGCTTATTGAATTTATTGTCATTTTT ATCCTTAATATTTTATTAAAATTCCACCATATAGGTATTAATGTTAAAATAAAATAAGTAAAAATTAATATTATATTTTT AAGATGATTTTTTTGTTCCTTCGGAAAACCTATTTTTAAGATGATAAATAAATTGAGTCAAATTAAAATATTTAAAGTTA TAATAATTTTAATATTAATATCTTATAGGTATTAATGTGAAAATAAAGTAATGTTAAATATAAAAATAATCATACAAGGA TGTCCTCTTATGTCATTTTACAATTTCAGCTTGTTCAACTGCTAGTTTTACCAAACACTTTTGTTACAATTACAGAGCTT TTCAACTTTCACCTATAAGCTTTCAGCTAGCTTATCAACTTTCAGCTATGAGCTAGCTTTTCAGCTATCAGCTAGCTTTT CAGCTTTCAGCTAGCTTCTCAGCTAAACATGCCAAACATAGCCATAAACAAATTCCCTTATTATTATTTTTCTCCAGAGA ATCCATGATAGATCCAACAGCTGTATTTGGAATGCTTTTTGGAAGTGAATTGTTTGAAGATTATATTGGAAAACTTGCAA TGGCTTCTTTATCATCTATAGAAGCTGAGGAAGTCTCACTAGATCTTGAAGTTCGTATGCAGAGAATTCAAGAAAGGATG AAAGTGCGTTTCATTTTCTAGAGGTCTAATACATATTTCCTTCCCTAGATCCCCTTCCCCCTCCCCATATTTTTCTATCT GAAGCTTTTGCCACGTTCTCAATTTGTAGACATGGCAGAAGGAAAGGGAACAAAAGCTTATAGTGACCCTGAAAGATCGC TTACAGCCTTTTGTTGATGGTCGAACAGATGAATTTGTATCGTGGGGAAATTCAGAAGCTTGTGACCTATCAAACGCTGG TAAGTTCCCTCATATGCTCTAATTCTATGACTATTAGTGAATCATGTATTACAAATAATCTTCATTTGAGAGGTTCCAGC ATCTTAAATTTATTCTTAATCATAAAATCGCTAAATATAAAATGATTAAATCCTTTTCAAGTCCTCAATTTAATCTAAAT TATTTTTCCTAATATGGTCATGCATCTATATCCAAATTTGGGATGGTCAATATTTTATTAGTATGCCGAGAAACTAGAGA AAAGATGATAATGTCTAACTAGTGTGAATTGAAGAGTCTAATGTCTACAGATAAAGTTAGAAAGAATTGAAGAGGTCTGC TTGAACTTTTTGCTTCTACTCTTCCTTCTCAAATATTATGTCAAATGCCTCCTCCTTTTGGTTATTAGTAACATGTGAGT AGACAAGACAAACTACTTTATTTTTCATTTGTTCTTTAAGAAAAAAATGCTTCATCTTTTTTGTTTGCATTTTCTTATGT ACTCAATTTTGTAAAGACTTGCACGAAAACCCCAAGCTCTTGTCCTTTATTTAAACATCCTTGGCAGCGAGGTGGGTTGT TCAAGTAGGAAGGCTGCTGGGTTGGGATACCCTTTATTTTTTATCCTGAATTTTGATTAAAGTTGTGTTTATTTGTTTAC TTATTCAAGTGTTGAAAATGTGGATTTTGTGAGTTGGCTAGGAACCTATGACCTTATAAGATGGTAGACTAAAGATTAGA ACATGCTTTTGAGAAGATAGAAATGAATGTTGGTGCAAGATGAAGATGAAAAAAGTGAGGGAGTGCCATGGGGAGGGATT AAGGTATGAAAATATTAATAAATTGTCTATGATAGTCACTTGTTACCGATATAAGCAGATTAGACACAAATGTCAACCCT CCTTCAGTAACTCTAGAGAAAATGTAGATCAAATGAACATGGTTCATATGAGAATAAAACATTGTATTTATGAAATTCAT ATTGGAAGATGCTACAATATATGTTACTTTTCAGCTTTTGGAGAGGCCATGCTACATACAATTGGTTATATCTATACCCG AAAAGCTGCCAGAGAACTTGGAAAGGATAAGCGGTATATGAAGGTTCCTTTTTTGGCAGAGTGGGTACGAGACAAAGGAC ACTGGATAAAGTCACAAGTGATGGCAGCCTCAGGTAGTATGCTATAGTCAATGATCTGTTATCAAGCTGAGATGACATTA ACCTTTCACAATTTTGGAATTTTGAATTGGCCTCAATTGCTTCTGTAGGTGCCGTGTCCTTAATTCAAATACACGAAGAG CTCAAGAAGCTAAACCAAGGAGAAAACAAGGAAGAAAACTTGGTAAAAGCTATCGAGAATAAAAAGGATGCCATGATAAA TTCCCTTTGGCAGATCAATGTGATTGATATTGAATCAACCCTGTCCCATGTCAGCCAAGCTGTAAGTTCAAGTACTTGTC ATGACATATACTTTAAGAAATCACATATGCAGTAAGAACAATGATGAGTTAGAAATATATCAAAATATCAATTAATCATA AGGTTTTAATGAAAGGATCTCGCACTTGCTATTTTCTCAGGTTCTTAAAGATCCTGGTGCTTCCAAAGATGTTCTAAGGT TACGAGCCAAAGCGTTGAAGAAGTTGGGAACTATCTTTCAAGTAAGTGTTTCATGGTTTTTCGATGTTCATGCATCAATA GCACCTAGGACTTAGGAGTGAGGGTTTCTCAATAATTATCTATTACTTTTATTCATATCTAAAATAAATTGGTTGGAACT TGTAATTGAGAAATCATAATTTTACCTCAGGGTGCCAAGGCTGCTTACAATAGAGAAAACAGTCTTCGCCACGAAAGTGA CAGACCAAGAGACACGTCTTCTTCATCATAGTCATTAATAGTCATGGAAGCTCCCAATTTTGAAGGATTTCCAAACATGC ACTCTTTAATTTTTAGAATATAAAGGAAGTGTTGTTATCTGATGGAATATGTCCTATTACTTAACTGTTAAATCTAATTT CTATGATATGTAAATGGACCAATAAGATATATGATGTGTGAATTTTAAGTATATATATATTTTTGTTGAGAAGCTATATA GGAAGGAGATAACTCATAATGATTTCACCATTGAATTTCATGAACTTCCTTTTTCGTAGTAAAAAGTTAATCGCTCAAAA TGAAACCCCTAAAAGCAAGTAAGTTGAATTCTGCATATATTGATTCTAATAAATTTTTATCAAGAGTAAGCTAATTTATT ATGTTATTTTGTCTATTTAAATGAAAATTAATAGAAAAAAACACAAAATTCCTTGGGTTATTCTAAAATAATATAATAAA ACTATTTACAAATTGATTGTTTGTGACGGAAAATAAACTTGTCGACAAGTTTGTGACGGAAGACAATTCCATCACAACAT TTTGCGACGAAAAAAGTATCTTTATCAGCGTGTTTGCGGTGGAAACTTAATCCTCACAAAACCCTTGTCC
CDS sequence (LotjaGi1g1v0564700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAGGAGACAACGTACTACGACATTTTAGGGGTCAACGTTGATGCATCCCCTGCAGAGATCAAGAAGGCTTATTA TATCAAGGCTAGGATAGTTCACCCTGATAAAAATCCAGGAGATCCCAGGGCTGCAGAAAATTTTCAGATACTTGGTGAGG CTTACCAGATTTTGAGTGATCCCAAGAAGCGTGAAGCATATGATAAGCATGGAAAGGCAGGGTTACCACAAGAATCCATG ATAGATCCAACAGCTGTATTTGGAATGCTTTTTGGAAGTGAATTGTTTGAAGATTATATTGGAAAACTTGCAATGGCTTC TTTATCATCTATAGAAGCTGAGGAAGTCTCACTAGATCTTGAAGTTCGTATGCAGAGAATTCAAGAAAGGATGAAAACAT GGCAGAAGGAAAGGGAACAAAAGCTTATAGTGACCCTGAAAGATCGCTTACAGCCTTTTGTTGATGGTCGAACAGATGAA TTTGTATCGTGGGGAAATTCAGAAGCTTGTGACCTATCAAACGCTGCTTTTGGAGAGGCCATGCTACATACAATTGGTTA TATCTATACCCGAAAAGCTGCCAGAGAACTTGGAAAGGATAAGCGGTATATGAAGGTTCCTTTTTTGGCAGAGTGGGTAC GAGACAAAGGACACTGGATAAAGTCACAAGTGATGGCAGCCTCAGGTGCCGTGTCCTTAATTCAAATACACGAAGAGCTC AAGAAGCTAAACCAAGGAGAAAACAAGGAAGAAAACTTGGTAAAAGCTATCGAGAATAAAAAGGATGCCATGATAAATTC CCTTTGGCAGATCAATGTGATTGATATTGAATCAACCCTGTCCCATGTCAGCCAAGCTGTTCTTAAAGATCCTGGTGCTT CCAAAGATGTTCTAAGGTTACGAGCCAAAGCGTTGAAGAAGTTGGGAACTATCTTTCAAGGTGCCAAGGCTGCTTACAAT AGAGAAAACAGTCTTCGCCACGAAAGTGACAGACCAAGAGACACGTCTTCTTCATCATAG
Protein sequence (LotjaGi1g1v0564700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKETTYYDILGVNVDASPAEIKKAYYIKARIVHPDKNPGDPRAAENFQILGEAYQILSDPKKREAYDKHGKAGLPQESM IDPTAVFGMLFGSELFEDYIGKLAMASLSSIEAEEVSLDLEVRMQRIQERMKTWQKEREQKLIVTLKDRLQPFVDGRTDE FVSWGNSEACDLSNAAFGEAMLHTIGYIYTRKAARELGKDKRYMKVPFLAEWVRDKGHWIKSQVMAASGAVSLIQIHEEL KKLNQGENKEENLVKAIENKKDAMINSLWQINVIDIESTLSHVSQAVLKDPGASKDVLRLRAKALKKLGTIFQGAKAAYN RENSLRHESDRPRDTSSSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 339 | 339 | 5.1E-165 | – | |
| PANTHER | 1 | 339 | 339 | 5.1E-165 | – | |
| Gene3D | 1 | 86 | 86 | 5.8E-28 | ||
| SUPERFAMILY | 2 | 100 | 99 | 1.3E-29 | ||
| SMART | 5 | 63 | 59 | 2.6E-27 | ||
| ProSiteProfiles | 6 | 71 | 66 | 20.494 | ||
| Pfam | 6 | 68 | 63 | 9.5E-25 | ||
| CDD | 6 | 60 | 55 | 1.07266E-22 | ||
| PRINTS | 8 | 26 | 19 | 2.5E-20 | ||
| PRINTS | 26 | 41 | 16 | 2.5E-20 | ||
| PRINTS | 43 | 63 | 21 | 2.5E-20 | ||
| ProSitePatterns | 48 | 67 | 20 | - | ||
| PRINTS | 63 | 82 | 20 | 2.5E-20 | ||
| Coils | 117 | 137 | 21 | - | – | |
| Pfam | 135 | 322 | 188 | 1.0E-47 | ||
| Coils | 240 | 263 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0564700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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