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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0566500 |
| Transcript ID | LotjaGi1g1v0566500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Adenine nucleotide alpha hydrolases-like superfamily protein; TAIR: AT2G21620.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05; TrEMBL-Plants: tr|I3TAI0|I3TAI0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0566500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109969753..109972463) extracted from Lotus japonicus Gifu genome v1.2.
CTTCGGGGAAAAAGTTAATGAAGTGCACAAAATGCTACTTTAAGAAAAAACAAAGTAAAGAATAAATAAAATAATAGAAA TCAACAAACATTGAATGTGGAAAGAACGTTGAAACAGGGTGAAGGTTTTCTATTTAGACACGGCATATTTATTGTTTATC AACCCCTAGTAGGCTAGTATACCAATAATAATTTCTGAAATTTGAGAACAGATAGAGAAAACACAAAGAAAAGAGAGTTG ATTGATCTTATTTGGTGAAGGAAATGGAGACAGTGATGGAAGATGTGGAAGAATACAACTTCAGAGAAGTGAGGCTTCCT TCTCTGATACCAGTGGTGCCAGAGCCAGAGCTTGAGAGAGAGTCAGGGGAAAGAAGAAGAGGAAGGGACATAGTGTTAGC CATAGATCATGGTCCCAACAGTAAACATGCTTTTGATTGGGCCCTCATCCACCTTTGCAGGCTTGCTGATACCATCCACC TTATTCATGCTGTTTCTGGTATTTCCTGAACTTCTCCTTTTTTGTATTCATTTTCTTCAAAGAAAATTTACAATTTTAAA TAGTGCATGCTTGGAAAACCTAAAATTGTTTTTTAAACCAGAATTAGTTCTAGGAAAAAACTCTGCGAGTAGCTTCTGGA TTTCAGAATTAACCGTGAATAATGACAAGCTGATCCAAACATGCTAAAATTTATGTTTTTTTTTGGGAGATGTGAAGATG TGAAGAATGTTTTGCAGATGTGAAGAACCAACTTGTGTATGACACTACCCAGGGGCTGATGGAGAAATTAGCAGTTGAGG CTTTTGAAGTTGCAATGGTTAGCATGATGACATATCTTTCCCTTTCAATTTTATGAATTTGATTAGAATATTCAATTGGA CAAAATAAAAAAGATAAAGAGTATAAGTACAATAGTCAGACAAAAGAAGACAAAGAGGGACATACACTTGGAATTATTAA CTATAAATGAAACTGTGTTTAGGCCATCTTCTACATATGATTGAGACTTGATTATGATACTTATTTTGATTAAGTTGTAA TACATCATGTATGTAGCCTGCACTTACAAAGAACAATCTTTTGGGTATTCAAGTTGTGTGAGCAAGGCTTGAATTTTGGG TAATAACATGTGATTTAAAGCCCAAATTCTGGTGTGAGGATCATTTTCCATTCAATAATATAGCTGCTGATTGTACCAAA ACATGCCAACCAAATGTATGAACCAGTGAAAGAAAATAATGCCAAAGCATTCATTTTCTAATAAATTCCATCTTCCCCAA CATTTGATAGTTTAACAAGCATCTTTTTGAGATGTTTCTCTTCAACAGCTGATACCTTCTATCATAGCTTTCAAGATTTT CAGTCGCATTATATTTGAGTCCTTAGCAAGTAATAATAATCCTTTCCAGCATTTTTCTGTGACTTGGTGTTTTTTTAGTT TCTTCTGAATTCAATTTTATTATTACAGCCTCTGCTGTTGATCACCTATTATTAGTTTATTTCTGTCAAACATGAATTTT ACCTGGTGGAAATTATCATGTAATACTTGGGTGCATTTGGATAAAGAGCTTAATGAAGCACCTATCACATAAGCACTTAT TTAATAAATTGAAAATAGCTTACTTGTATTTATAAACACGTATTCATAAGCTAATTTGTGCAGCTTATAAAAATAAGCTC AAAACATGTTAGAATTTGGACATAGGCTTACCCAACACTTGCGTAAGTGTTTACGTTATAAGATAAGGATTAAACACAGC CTTAATGCTAGATGATTATGATATAAAACAGGTGAAAACAGTAGCTAGGATTGTGGAAGGTGATGCAGGGAAAGTTATTT GCAATGAAGCAGAGAGGATCAAACCTGCAGCTGTGGTTATGGGGACCAGAGGCCGAAGCTTGATTCAAAGGTTTTCCCCT TCACTCCCTCCCTCCCTCTGTTTCCTTCTCTGAATCCTGCAGTTATCCAATATTCTGATGCATTAGTTGGCTTGTTGTTG TGATTTTTTTCAGCGTGCTACAAGGAAGTGTTGGTGAGTACTGTGTTCACAACTGTAAATCAGCACCTGTTGTGATTGTT CCTGGAAAAGGTATGTCTTTGCCATTTTTTTGAACATTTTCTTGCCGAGGTGGATTAGAATTTTGAAGGTGTTTTATTTC CTTGGTTGGCAGATGCTGGAGATGCGTCAATCATCTAGTGATGGGTATTAAATTGCGGTTTCAGCTGCGTTGCGAAATTG TGGATATATGCGGGTTGAAACAACAGCAATTGCAGTCGAGATGCTGTTGCGGGGGCTTCAAAACCTTTACTACTGCGGTC CGCAGTTTAAAACCCTGATCTAGTGGCATTAGGTTGTGAAAGGTTGTGTTTTATATATAGGCTTTGCTTTGTTATGTATA GCTTCGGTGTGTTAAGATTGATTCTAATTCAGTTGAACCCAAAAATTGTATCTAACTACTGCTAGTGTGAAGATTGATTC CAATTCATTTGAACAAGGGAAAAAATGCATCATATGCTGTGGTTTGTTTTGTGATAACCCACCTTCCAGTTCAGAAATCC TGAACATTTTACTATGTTTTGCTTTATGAGCACATTGAATACCTGTATTTAACCATCTGCAATATATGTATCATCAGGAG AGAAAACTTCATAAGCTGAAAGAAAATTATGCCTTTACCATTATTCTAACTATAAATAATTAAGATTAAAA
CDS sequence (LotjaGi1g1v0566500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGACAGTGATGGAAGATGTGGAAGAATACAACTTCAGAGAAGTGAGGCTTCCTTCTCTGATACCAGTGGTGCCAGA GCCAGAGCTTGAGAGAGAGTCAGGGGAAAGAAGAAGAGGAAGGGACATAGTGTTAGCCATAGATCATGGTCCCAACAGTA AACATGCTTTTGATTGGGCCCTCATCCACCTTTGCAGGCTTGCTGATACCATCCACCTTATTCATGCTGTTTCTGATGTG AAGAACCAACTTGTGTATGACACTACCCAGGGGCTGATGGAGAAATTAGCAGTTGAGGCTTTTGAAGTTGCAATGGTGAA AACAGTAGCTAGGATTGTGGAAGGTGATGCAGGGAAAGTTATTTGCAATGAAGCAGAGAGGATCAAACCTGCAGCTGTGG TTATGGGGACCAGAGGCCGAAGCTTGATTCAAAGCGTGCTACAAGGAAGTGTTGGTGAGTACTGTGTTCACAACTGTAAA TCAGCACCTGTTGTGATTGTTCCTGGAAAAGATGCTGGAGATGCGTCAATCATCTAG
Protein sequence (LotjaGi1g1v0566500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METVMEDVEEYNFREVRLPSLIPVVPEPELERESGERRRGRDIVLAIDHGPNSKHAFDWALIHLCRLADTIHLIHAVSDV KNQLVYDTTQGLMEKLAVEAFEVAMVKTVARIVEGDAGKVICNEAERIKPAAVVMGTRGRSLIQSVLQGSVGEYCVHNCK SAPVVIVPGKDAGDASII
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 178 | 178 | 4.5E-104 | – | |
| Gene3D | 40 | 169 | 130 | 4.9E-23 | ||
| SUPERFAMILY | 41 | 170 | 130 | 6.36E-26 | – | |
| Pfam | 41 | 168 | 128 | 4.0E-20 | ||
| CDD | 43 | 167 | 125 | 3.63589E-24 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0566500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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