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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0567300 |
| Transcript ID | LotjaGi1g1v0567300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coiled-coil domain-containing protein 115 family; TAIR: AT1G20770.1 coiled-coil protein; Swiss-Prot: sp|Q5EAR6|CC115_DANRE Coiled-coil domain-containing protein 115; TrEMBL-Plants: tr|I3SFT0|I3SFT0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0567300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:110064306..110072287) extracted from Lotus japonicus Gifu genome v1.2.
ATAAACTGTAACGTAAAGAGAGAAATCAAGAGAGACGTTGAGCGCCGCCATCAACGGTGGAACAAGCGTATTCGCCGGCC GTCGCTGCTGCTTCCATTTCCTGCTCGCAGTCGCAGGTAGCAGTTCTTGTGTTCTTCCATTGTCCTTGTTTAAATTAACT ATCCAATTCATGAATTCAATGATTCATACAAAATTTCTGGTTCCGCCACTGATCAGCAGCATCACACAATGAGTTCTGTG AACACTGAAGAACCCCAAAAACTGGAATCGGAGGCTGTTGAAGGAGAAGAAGAAAATCAACAACTTCAACTACTTGTAGC TGAGGACAAACTCGCCTTGCAATTCATGGATTCAGTGCATAACTACCTATCCCTCTTCGATGCATTGTCCTCCACACTTG GACAGGTACGTCAAAACCAAATTCAATATTGATTGATTAACTGTGTTTTGAGCTAAAAGCCTAAAACCCTTCCAGTAGAA CAAGGGTTTTTGAATTTGATAGCTACCCACCTTTCAAAGTCTGTAATTTCCCACTACTTAAGTCAAATTGTATCATACCC ATAGTTTAGTTTCTTCAAATTAGTGTAAATACAAGCATTGGTCACTGTCAACATTGAATCTATTTCCTTTTTGTTAACCT TCTTTGAATTTTGGCAGGGATGGCTGGATTTAGCTAGTGCTCGACATTCCATGGGTGCTTCACGCATTAATAGCAGTTTA TTGGACCTCAAGTTCCATCCAGCTGCTACAACATCAAAGATAGTCAAATACCAAGGTAAAAATTGTGTTTTATAGTGAAG ATAATGGTTGTGAATGTTTGATCTTACTTGTATCCTTTGTGTGCTTTTATGCTTTTGCTTGCATTATTATGATGCCTTTC TGTAACCGATACTTTGTATTAATTTTGATGGAACCTCTGTTTTAATATATGAAATATTGCACTTGACTCAATAGGTGAAC AACCATGCTTCATGTTGCGCAAATGGGTATCCTCTGAACATGAAAATTCTCAACTGGAAGACAAGAATGGGAAGCTACAA GATAGTAGTGGTATGAAGTCTTTTGCTGTTATATTTTTCCCTGTGCACTGGGAGTGGTTTCTCTTATGTTAAAATTTAGT ATGACCTTGTCAATAACAACAACCTATGGATCAATATTCAATAACATCACAATATCATACATATCATGTATTAAGTTCAT AGGTATAGAGTATTCTCTCTAAATCTCTCTTAATGATATTACCTGTAGTTTATCTTGGTCTCCCTTTTCCTTGAACTATT TGATTATTACCCACTATTTGATTATTACCCATAATAAAAGATTGGAATAGAGAGGGATACAAAATTTTATGTCAAAGTCA TGTGAAATTTTAACACGAGATGATATATTCCCACATGCTTCACATGAATGGTATGTTTTTCCCCCATTCATTGTTGATGT GACGGGGAAACCTGTCTACTGAGCTGGCATAATACATGTTTTTTCTTTAGATATTAACATACTGCAATTTAAACTTGATG TTGGGGTTAATCCTGAAATGAATGGTACACAGAAGAACAAACTTTTATTACATTGTAATCTGATTTTTCCATTCTATGCT TTAAGTCGCATGTTAGCTGTTTCTCATTTTCTTATACTTGGCTTTGCAAACAGCTGAGGTAACCGCTGCAAATAACTTAT CAGGGCTTGCAGATGATGAGGAAGTAAGCATTCTACAAATTTATCACTCTCATTAGAATATATTTTAGTTTCCCTTAATG GGATATTCTTATATTAACACAAGCATTGCAAGTAAAACTGGATAGAATTTCTGGTATCTTTGCTATGTACATATGATGAA TGAATTGTAGAATTTGGTGTGTCAAACATTTTCTTAGCATGAGTATTTGAACTGTCAATTAAGTTACTATATAAATCTTG TTAATGCTTTTCATAGGTTCAAAAGGAGCGATCCAAGTCCTTGTCTGTTTTTGGAATTTTAATTTCCCCCAAGCTTCGAT CCACACAGCTTTCATTTGAGAAAGGTGGATCACAGAACTTGAGCTCTTAAATCTCCATACATTGTTTGGACATGTGAATT CAGTCATCTGCTTATATTTTTATACTTGACAGACAGGATATATAACGCATTCTGTCAATTGAAATCATTTGCAGCACTAG AAACCCTCATAGAATTAGCAAATATGCGTTCATCATTGATACATTCTTTTCACCAACTTCATCGAGAGACGGAAGATACT GAAGAATGAAAAAGTAGCAGTTCTCTCAGGTATTGATAACCTTGACTCCATTAGTCCATTTGCTTTCTTTTCTTCACCTA TGTTGGCTGAACAAACTTAAAATATTATGTGTTTCATTCTTTCAATTACACGTTAAGACTATGGTGCTTAATTTGGTTAT ATGTGCTGGATATTATAAGCACACTTCGTGATTTAGTGCATGTTTGTAAGGAAAAGCTTCTGTGAGTATATTCTGGATTT CAGAATTGATTATGAGAAAAGAGAAACTGATATATACATGGTTTTTTTTGTGAATAGGCTGAGTATATTCTGGATTTCAG AATTGATTATGAGAAAAGAGAAACTGATCTATACATGCTATTATTTGTAAACAGGCTGACAGAATTGTATCTCATGTGGA TGATCAAATTACTGTACTGGAAGACCGAGCATTGCAAGGTTTTGGCGTTCAATTTGTTGATTTATCAGAACACAGCAAAA TTTCCTTCCAGTGCTTATTACACTGTGCATCCTTTTCAGAGTCTATGAGATTCTACATTAGTTTTGAACAGTTTACAGAA TGCCATCATGTTGGATGAAACAAATTCTTCAAATATGTTTCTATTCAATATTTTTGTTTCCTTTTACTTTTTACTGTGAT GTCTCATTGTATTCAAAAGCACACTATGATTTGCTGGAAACTGTGGAATACATAGAAAAATTGGCAGCGCCCTTGCAGTT ATAACATGTTTAAATTAACTTATTTTTCTTTCATCGGAATCAATTTGGAGTACCCAGAAACTACTTACAAAAAAAGCTTT TCCCCAGTATTAATTTTGGTTTAGACAGTTGAATGGAACCCCTAGTATTGAACTTTTCATAGACAACAATGCATGCTAGA GTAAGGGTTGAACTTGTGCGTAGCTTGATCACTTGAAAAATGAAAATGACAACCACCTTAGCTAATTCAGTCCTCAGGAA TACAATTCGACCGACGGAAAAAAGCCTAGGTAATACCCACATAAGCTTATAATCCAAAAAATAAATCCAAATAAGCATTA CAAAACAAAATGAAATGCTTTAATAATGTAATGATTTACAAAGAAAGACACATGAGGACGCAGCTCATAAAAGGAAAATA AAAAGAAAAAAGACCTCACATGCCGCTTGCCACAATCAACTTAGTAGTACATCCACACCATGTCATTTAATTTTATCTCT CTCTATCTCTCTGTCCACGCACTCCTCCTCACATTACCATTAAAAAAAAGAACTGTCTTTAAACTAATACATGCGTCATA TAGAACAATATTTGCCGTGCCGCTTTTTCTTCTAGCTATACACAAAAAAATAGGCTATCATGAACAATCAAGTAAATAGA AACAACAAAGAAAACCGGGAAAAAACTTGGACTGCATGGAGGCTAGAATGCCCTCCAATTATCAGATTCTTTCTTTGGAG ATTGATTCTCTGAAGTAACCTTAAATGGACCAGAGGAACCGAAAGGATCCGAGTCATCGAAAGAGAATGGAGCATTATAG CCAAAGTCCTTGCTGCTACTAATTGAGTCAAACCTCGCATGCCCCTGACTACCACCACCGAAGCCGAAGTCTTTGCTGCT ACTCATGGAATCAAACCTTGTGAGCCTCTCGGGATTGTTGTAGCCGAAATCTCTGCTGCTACTTATAGAATCAAACCTTG AGAATTTCTCGTTATTATAGCCAAAATCTTTGCTGCTACTCATGGAATCAAATCTTGTAAGTCCCTCAGGTTGTTGTGGA GACTGAGAATATCCACTTTCAGGAATGCTGAAGGAATCAAACCTTGACATGTCAAAGAAGTGATCCCCTGCCTCACTGTA CCTTGGAGAATTACCGAAATTGGAAAGTGGTGTTGCAGGCACTGAATCATCAAAAGCAAATGGGCTTTTTGTTCCTGTTC TAACTGGGTTTATACCAAAATCATCAGATTTAAAGACATCCCTCTGGTGCTCCAAGTCAGAGTCCTACAGATAGAAATTT TAGTAGCTTTACATCAATTTTTGTTTTTCACAGAAGCCTTATGATGCATATGTCCAGAAAATCAAAGCAAATTGATCTTT GAAAATAGCATACTGTTAGGAACCCAGATTCCTAACAGTGGACCTTGAAAATAAATGCAAGAAATAAAATGAACAGATTG TTTATTTGATGGGCAAATGGAAATACAGAGAGGGAATGGTATCCCAAATCTGACACAGAGCCTAGCTCCTATAGGAAGCT TAGAGCTTCCTACTCATCTCTACAACTCAATGATCCAAAGATGACCTCTCAACCTCTCCATTCCCTTCTTATATAATGGC CTATTACAATCATATTCCTCTCTCTATTCTGTTAGGTAGTTGCTAGTAATCCCCACTTTGCCCCTTCTAGAATACACTAT CCATATTCCTTGGTTGAATGATGGATCAAAGGCTCATAAGTGCCATTTGGGCCTGCTTGGAAATCCCAGGGTCTAACAAT ACCACCTGCTGAAAGATCAACCTTGTCCTCAAGGTTGAAAACAGGGAATTGGCTTCTGATGTTAAGAGTGTCCTTCCATG TTGGTTCATCCGCAGGTTTGCCTTGCCATTGGATCCAGACCTGAGGAAGTGTAGATTCCTGTCTGGTAGTGAAGCGACTA GTAATTACTGAAAAAGGATGCACACTAGCCACTTCTTCTCCTGTCAAGTGATCTAGAAGTTGTAGTTCCACAGAATTGTT TCCAACTGCTTCTTTAAGCAATGAGGCATGGAAAACAGGGTGCACGCGGCCTCCTTCAGGTAATTGTAATCTATAAGCCA CCGCGCCAATCCTTTGAATTATAGGATAAGGGCCATAGTAGGGAGCAGTCAGCTGGGGACAATCACGGGTCACAACTGAA TTTTCTCTAAGAGCCCTGAGCTTGATGAAGACCCATTCAAATCCCTCAAAAACAAAAACAGAATCGAAAGATAGTTGGCA CACAACCCTCATTTCAGTCACCTCATCAGAATACCAGCCACTGCAATGAACAATTCTGCCACAAAAACACAAGTGATCAA TACAGCTTCTACCCGGATCCCATAGTTGCAACCGGAAAGAGTACCATATGCATAATGTGTTGGGCGAACTTTCTTCATCA TGGGGACAAATCCAGTTTATGCAAAGTGGTTGAAGTAGCATTGAACCACCATCTACTGCTTCCATTACGCTCCCCGTGGA TGATATCTCAGTTACCTCACAAGGGATTGAATGGTGAGAAACACGAGTATTCCAGAAAAATTCCACATCCTTAAGGGACA CACCATCATGCTTTTCCATCTTCAAGGTATCCATTGGAAAAGGCGGAAGAACAATCTCAGTTATATGATCTTCTAAACAT ATTGTGAAGTAGTCTCCCTTCAATACCAACCCATTATCTATTGGTGAAAAATCAATGACTAGAGTCACAATCTGATATTC TGTGGTTCTTCTTTCCTTACCACAAGGCTGCACCCTCAGCTGTTCTTGACAGAACTCAGTTGCTAAAACTGGTGATGAAA ACAAACTAGCGATTGCACAACAAACACTATACACCACCAAATTTTTCATGAAAAATCTTTCTGTCCTTAAAGATAGTTCA CCACCAGCCTCCATGACTTGTGTGTCTTTGATAGGAGCACAAGTATGAATCGCGACAAACTCAAGTGGCTGAAGTGCAGA GAATGGAGAAGGGTCCAAGAAGTCCTTGTTGAAAGTGCCAAAGATGAAAGGATCTGTTGCTGGTTTCCCTGGCGGAACAT GAAGACGTCGATCGGCGAAGAAAGAGAAATGCAGGTTATCATAGGTCTTCTCATAAACCCTTTCATCTACAGCAATGGAA ACAAGGAGATGCGAATGCAACACAAAGTCTGAATCAACAACCTTCACGATAGGTGTTCCCTCCTTGTGGAAATCAGAGAA ACCATTGTCGATGGTACCAAAATTGAAAGCCTCAACCTTTGGTTTCCACTCCGGAAATTCGAGTTCTTGGTCAGCAAAGA ACGAGAGAGATGAAGCTTGCATCGTGTGTGAATCACAAATTGATGAAAGAGAAGTCGAATCAAGAGTAGCGGCATCAAGG TATGGCGGTGAGGATGAATCTACAGCGACCACGCCTTCAATCTCAACACTTGATTCTTGCACCATATCCATGTCCACCGA ATCAGAAATTGGCGAAGAAAAAGATGTATCAGCCTCAAATTCCGTCGGTGAAGATGGTGAAGCCAGTGAAGATGATGAAG GAGTCAAGAATCCTTCATTGAATTCAGCACTTGTTGCTTGAACTTTGAATCCTTCATTGAATTCAGCACTTGTTGCTTGA ACTATGGGGAAACCAGAGATTAACGCAGGAGTAAAAGACTCTGTTTTCCCTTCATGGTTATGCCCGTGTGTCTTCATTGC CATTTGGGCCCAATCCTTTGCTTGGCCCACTTCCACCAGTTTGAAAGTTGGGCTTGGCCCATGAGAAAGGTGAGTCCCAG CTTTGATTTGCTCCTGACGTTCCAAACCTCTAGCATTGAAATGTTGTGAGCCTCCAACAGCTGCGTCCTCTCGCGCCTCC GCCGCCGGTGCGCCGTGGGCCTCTAATCTCGCCGCCACATGCGCTGGGTACGCCGCCGTGTGCAGATCTGAATCTGGCGG TTTTTGTGGCGGTCGCATGGTGGCTTCCGGTACTGCCTCATTTGCAATTGCTCCTTCGCTTGGGAAAAGCAAGATCTTGC TTCCCTTCTTCCCCGATTCTGGATTTCTCGAACCTTCGAGCCCTAAATCGACAAATTGGGAACCAATTTCGGCTCCTTTC CCTATTTTCTGTAATTCTTTCCGAAGACCAGTACTCAGCCCCTTCGTTTGCAGCAAAATTCTTCCCTCTGATTCAAAGGT GAGGTTCGGAATCACTTCTTCCATCGCTGAATCTTTCTCCGGCGCAGCTTCCAGCATCGCAGCAATCGTCGCAGGAAGAT CCTTGACAGCCAGTGCCACTGCAGCCAGCGATGTGCACATCTCCGCGAGCTCATTCGCCATCGCGCCAACTCTCGCCTCC ATCTGGGTCTTGGTTTGCTGGTTCCGGCGAAGATCATCCGGCAAAGCGTATCCGGCAGGTCGGACCATTTTGTTAGGAAC CCAGATTCCTAACAGTGGACCTTGAAAATAAATGCAAGAAATAAAATGAACAGATTGTTTATTTGATGGGCAAATGGAAA TACAGAGAGGGAATGGTATCCCAAATCTGACACAGAGCCTAGCTCCTATAGGAAGCTTAGAGCTTCCTACTCATCTCTAC AACTCAATGATCCAAAGATGACCTCTCAACCTCTCCATTCCCTTCTTATATAATGGCCTATTACAATCATATTCCTCTCT CTATTCTGTTAGGTAGTTGCTAGTAATCCCCACTTTGCCCCTTCTAGAATACACTATCCATATTCCTTGGTTGAATGATG GATCAAAGGCTCATAAGTGCCATTTGGGCCTGCTTGGAAATCCCAGGGTCTAACACATACTTTCAAAGATACCAATTAAG TTGATACCAAGATTCTTTTAGAGAGAGAAAGATACCAATCAAGTTGATACCAAGATTCTTTTAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGCAGTAATAAATTAAAAGCTAGGTATGGTATGAGTTACCTTGGCACCCCAAATTGAGTCCACG TCATCATTATTGTCAAATGCACCCCAAGTTGATTCATCAAAACTTCTGTTACCATAGATTAA
CDS sequence (LotjaGi1g1v0567300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCTGTGAACACTGAAGAACCCCAAAAACTGGAATCGGAGGCTGTTGAAGGAGAAGAAGAAAATCAACAACTTCA ACTACTTGTAGCTGAGGACAAACTCGCCTTGCAATTCATGGATTCAGTGCATAACTACCTATCCCTCTTCGATGCATTGT CCTCCACACTTGGACAGGGATGGCTGGATTTAGCTAGTGCTCGACATTCCATGGGTGCTTCACGCATTAATAGCAGTTTA TTGGACCTCAAGTTCCATCCAGCTGCTACAACATCAAAGATAGTCAAATACCAAGGTGAACAACCATGCTTCATGTTGCG CAAATGGGTATCCTCTGAACATGAAAATTCTCAACTGGAAGACAAGAATGGGAAGCTACAAGATAGTAGTGCTGAGGTAA CCGCTGCAAATAACTTATCAGGGCTTGCAGATGATGAGGAAGTTCAAAAGGAGCGATCCAAGTCCTTGTCTGTTTTTGGA ATTTTAATTTCCCCCAAGCTTCGATCCACACAGCTTTCATTTGAGAAAGCACTAGAAACCCTCATAGAATTAGCAAATAT GCGTTCATCATTGATACATTCTTTTCACCAACTTCATCGAGAGACGGAAGATACTGAAGAATGA
Protein sequence (LotjaGi1g1v0567300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSVNTEEPQKLESEAVEGEEENQQLQLLVAEDKLALQFMDSVHNYLSLFDALSSTLGQGWLDLASARHSMGASRINSSL LDLKFHPAATTSKIVKYQGEQPCFMLRKWVSSEHENSQLEDKNGKLQDSSAEVTAANNLSGLADDEEVQKERSKSLSVFG ILISPKLRSTQLSFEKALETLIELANMRSSLIHSFHQLHRETEDTEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 30 | 206 | 177 | 1.0E-46 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Vacuolar proton-transporting V-type ATPase complex assembly | The aggregation, arrangement and bonding together of a vacuolar proton-transporting V-type ATPase complex, proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across the vacuolar membrane. |
Expression pattern of LotjaGi1g1v0567300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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