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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0576900 |
| Transcript ID | LotjaGi1g1v0576900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione S-transferase; TAIR: AT3G09270.1 glutathione S-transferase TAU 8; Swiss-Prot: sp|P32110|GSTX6_SOYBN Probable glutathione S-transferase; TrEMBL-Plants: tr|I3SAX7|I3SAX7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0576900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:111551006..111553820) extracted from Lotus japonicus Gifu genome v1.2.
GGATCAGTTTAACCAGAACCGTTTGATATAATATTAACATATTCAATGATTCAGATTCAAAATACAAAAAAACATGTACT GGCGAAAACACCCCTGACTTATCATCTCTATCTCACCTAACTGCTCTACTGAAAAAAATCATAGCCACCGGCCTCCCCCT ACTGCCCATCCACCACCTCCTCCTCCTCAGATCCTCCTTCTCTCCCTCCCCCTTCCCCTCCACCGCTCCCCTGACCCAAA ACTGTGAACCTCTCCTCAGCCTCCTTCAACCTCTGATTTAAGCCCCAACCAAAAACAACAACAGGTCCAAATCCGCCACC AATCTTTTAGATCTGCCACCAAATCTTCCCAGACACCAAAACCCTCCGGCCTCCACCGCCCACCGGGATCAGATCCGTCA TCAAAACTTCCAGATCCGCCACAAAATCTTCCAAATCTTCCAGCTGCTATTTTCTTCTTCTCAACACACAATTCAACACA GTCGTTGAGCCCGCACCACCAGATTCGCACCCGAGAGCTTCCACGTCCACCGTCGTAGAGTCCCCGCACATCGTTCATCC GCTAACAACAACAACATCGCATAAAGCTTCCTTCGACAGCCTCCACCGCTGCAAGCACCCATTGCAGGATCTAGGGTTGT TCTCCGAGACTTAAATACACGTTGTTGGGGTTTGGGTTTCACTGGGATAGGATTGAAATTGTTAGATACACGAGTAGAAA CAGTTTCTTTCTTCAGATTTGGGGTTCTTATTTGTATTACACATATTCTTATTGATAATTTGTTGATGCACCATGTTTTC ATATTTTGGTTAATCAATGGATATTCAAAGACCTGTTTGCTGGCTTTTTTTCTTTACTGCATTTCAATTCTCTGTTAATT CAACTTGATTGGCAAAAAAGATGGAAATAGACAGAAATAATGGAAAGGAAATACATTTTTGCTGGCTTTTTTCTTTACTT CAATCCTTTTGTTTTCAAATTGAAATGTTATTTTTGTTTGGTATTTGATCTGCATCTGTGTGGTTCATCTCTACATTGCA CGTTGTTCTGAATCTGAGATGTGAAGGTCAAAATCAGAAGAGAACGGGGGTGAAGGAGGTGAGTGGATGATATTATTGAA ATATTGTAATTATTAAAGGGGTATTTTTGGTGTTTCATACAAAAAGTAAAGTGATCCACCGTGGATCACTTACCAAGTGA CCCACGGTAGGCGCAGCCGTTAAACAATGGTTCTCTTTTCAATTATCCAACTACCATGAATTTTTCAATGCTACTTTTCC CTTTTCTTGAATTGTCCGCCAACAACGCGTCTTCTTGTCTTTGTTGTATAAAATGCCACAAGACCATAGACCCTCTCAAG CAAAAGCAAATAACTTAACAGTATTTCTAAATCGAGATTCGAGAGTACTCAAAGTGCTGCAATATAATGGCTGCATCAGG GGAAAATGTGCAACTTTTGGGAATTGTGGGAAGCCCATTTGTGTGCAGGGTACAGATTGCTCTCAAGCTGAAGGGAGTTG AATACGAATTCGTGGAACAAACCTTGGGTCAAAAGAGTGAACTGCTCCTCAAATACAACCCTGTTCATAAGAAGGTTCCT GTTCTTGCTCACAATGAGAAGCCCATAGCAGAGTCCCTTGTGATTCTTGAGTACATTGATGAGACCTGGAAAAGCAACCC CATCTTGCCTTCTGAACCTTACCAGAGAGCCATGGCCAGATTCTGGTCCAAATTCATAGATGACAAGGTAATTGAGCATT GAAATTCATAGAAGTTACTATTATAATTTATGGTTAGGAGTCAAATTAGTTACAGATAGATATGGCATAGATAACATTTA TAAATTGAAGAACAGGCCTAAACTCTTAAACTAGTTTTTGGATTCAACTAAACTTCAAAGTTCTAATATTTATGAGGTTT TCTATCCCAGCCAAAAATTAGTTTAGAGATCACGATTGTCTTTCTATATATAAAAGTTATTTTAGTCATATCTATACTTT TAAACAAAATTGATTCTGCGGTTCTGCCTTTAAATCTACACTCCTTTTAACAAACTTTGTTTAATTTTATGTGACCAAAG TCAAAATTCTGTTTGTCCTAATTATATCAGGTCGTGGATACAACATGGAAATCTGTTTTCACAGTGGAAGAGGAAGAGCG TGAGAAGAGAATTGAAGAATTATCTGAGGCACTGCAGTTTCTTGAGAATGAGCTGAAGGACAAGTTTTTTGGGGGAGAGG AGTTTGGGTTTGTGGACATTGCTGCTGTGTTTGTAGCTTTTTATGTCCCTTTGTTTCAAGAAATAGCAGGGTTGCACTTG TTCACAGCTGAGAAATTTCCCAAGCTCTACGACTGGAGTCAAGACTTTCTGAACCATCCAGTTGTGAAAGAATCTCTGCC CCCTAGAGATCCACTTTTTGCCTTTTTCAAAGGTCGCTATGAAAGCCTTACTGCTTCAAAATAAGATCAATTTACAGTGA ACTTGGAAACTTTGATGAAAATTGCTGGAGTATGAGTCTGTCATTTATGTATTGCTGTTAGGATTTCATTTCTAAGTGAG TTACATATGTGGTCTAGGATTTCTCCATGTAATAGAAATCCAAGCATCTTGTTGACATATTTGCTATTTCAATTGGTTAA AGAAGTTATGATTCTGTTCTTTAAAGATGTTGAAGCAGCAGAATTTACCATGATTAAAATGTTTCCCATGATTATGAAGG AGAGTGTATACTATACACAAATTGCAACTATACAATGCAAGCCAAAAATTCCATGGATAAATTACATGAAATTAGAATAA CAACTTTTTCCCTCC
CDS sequence (LotjaGi1g1v0576900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCATCAGGGGAAAATGTGCAACTTTTGGGAATTGTGGGAAGCCCATTTGTGTGCAGGGTACAGATTGCTCTCAA GCTGAAGGGAGTTGAATACGAATTCGTGGAACAAACCTTGGGTCAAAAGAGTGAACTGCTCCTCAAATACAACCCTGTTC ATAAGAAGGTTCCTGTTCTTGCTCACAATGAGAAGCCCATAGCAGAGTCCCTTGTGATTCTTGAGTACATTGATGAGACC TGGAAAAGCAACCCCATCTTGCCTTCTGAACCTTACCAGAGAGCCATGGCCAGATTCTGGTCCAAATTCATAGATGACAA GGTCGTGGATACAACATGGAAATCTGTTTTCACAGTGGAAGAGGAAGAGCGTGAGAAGAGAATTGAAGAATTATCTGAGG CACTGCAGTTTCTTGAGAATGAGCTGAAGGACAAGTTTTTTGGGGGAGAGGAGTTTGGGTTTGTGGACATTGCTGCTGTG TTTGTAGCTTTTTATGTCCCTTTGTTTCAAGAAATAGCAGGGTTGCACTTGTTCACAGCTGAGAAATTTCCCAAGCTCTA CGACTGGAGTCAAGACTTTCTGAACCATCCAGTTGTGAAAGAATCTCTGCCCCCTAGAGATCCACTTTTTGCCTTTTTCA AAGGTCGCTATGAAAGCCTTACTGCTTCAAAATAA
Protein sequence (LotjaGi1g1v0576900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASGENVQLLGIVGSPFVCRVQIALKLKGVEYEFVEQTLGQKSELLLKYNPVHKKVPVLAHNEKPIAESLVILEYIDET WKSNPILPSEPYQRAMARFWSKFIDDKVVDTTWKSVFTVEEEEREKRIEELSEALQFLENELKDKFFGGEEFGFVDIAAV FVAFYVPLFQEIAGLHLFTAEKFPKLYDWSQDFLNHPVVKESLPPRDPLFAFFKGRYESLTASK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 222 | 222 | 1.6E-123 | – | |
| PANTHER | 1 | 222 | 222 | 1.6E-123 | – | |
| Gene3D | 2 | 86 | 85 | 3.5E-37 | ||
| SFLD | 6 | 222 | 217 | 0.0 | ||
| ProSiteProfiles | 6 | 85 | 80 | 18.85 | ||
| SFLD | 6 | 222 | 217 | 0.0 | – | |
| CDD | 8 | 81 | 74 | 1.9008E-41 | – | |
| Pfam | 8 | 79 | 72 | 6.1E-19 | ||
| SUPERFAMILY | 8 | 108 | 101 | 1.17E-24 | ||
| SUPERFAMILY | 79 | 218 | 140 | 6.82E-39 | ||
| Gene3D | 87 | 224 | 138 | 2.1E-46 | – | |
| ProSiteProfiles | 90 | 212 | 123 | 19.903 | ||
| CDD | 91 | 216 | 126 | 8.72358E-44 | – | |
| Pfam | 118 | 197 | 80 | 6.5E-14 | ||
| Coils | 121 | 141 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0576900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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