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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0577000 |
| Transcript ID | LotjaGi1g1v0577000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione S-transferase; TAIR: AT3G09270.1 glutathione S-transferase TAU 8; Swiss-Prot: sp|P32110|GSTX6_SOYBN Probable glutathione S-transferase; TrEMBL-Plants: tr|I3T7D8|I3T7D8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0577000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:111574737..111578471) extracted from Lotus japonicus Gifu genome v1.2.
ATATATATATATATATATATATATATATATATATATATATGTCGCATCCCCGCATCCTACTTTTTTTTTATTTTAGCCGT ATCTCCGTATCCGTATCGTATCCGTGTCCGTGCTTCATAGATAATAGTTAATAGTTTTTCAAGGTCTGTAAGAAAGACAT GAGATTCCATTGCCCAAATGATTAATTTCATTTAGAAGTTCAAAAGTCAAAGAGAATTCAAGTTCAGTTCAGCCATGGCC GGAAGTGAGGAAGAGGTGAAGCTTTTCGGATCTGTGGGAAGCCCATTTGTGATCAGGGTTCAGATTGCTCTCAAATTGAA GGGAGTTGAATATAATTACCAGGAAGAAACCTTGGGCAGCTTGAGTGATACGCTCCTCAAATTCAACCCAGTTTACAAGA TGGTTCCTGTGTTTCTTCACAAAGGGAAACCTATTTCAGAGTCCCTTGTGATCCTGGAGTACATCGATGAGACATGGAAA CACAACCCCATCTTGCCTTCTGACCCTTACCAGAGAGCCATGGCCAGATTCTGGTCCAAGTTCATAGATGATAAGGTAAC TCCACTTTTTCTATGCACTGATTTGTCCCATAAACATCATCACACTTATATGTATATTTGTCTGTGAAATCTCTTATGAC TTATGAGCTTTAATTCAAATCTTTGTAATGCATAGTCAAATTCAATTATGAATTACCTTCAATTATTGTTATTTTGTAAA TTTTGTGGAATATTATAGAGTTCTGGTTGAATTTCTAATTTTGGGGGGGGGGGGGGCAACAATAATTCTGGAACTTAGTA TTTTTTTACTAGCTAGTCAGATATAGAGATACAAAGTACCATGAAATCATCAACAGTCTAGACTCTAGACCAAAGGGAAG AAATCATAATATTATAACTGTTGTTTGCATGAGTGTTTGTCATAATTAATTTTGGACTGATTTTGGTAAAATTAATAACT TTTTTAGTGATTTGTTTTTGGAGAAAAATGATTTGTATAGGGTAAAAGTGTGAAATCTGTTCTCAGTGATTAACTACATC TCAGAAACTAGGCTTATTAGCACTTTTGGTCCCCTCGTTTGTCATTTGTGCAAATAGGATCCCCAAACTTTAAAAATAGC ATTTCATTTCCCCGACGTTTACCTCCGTCAACACTTTTGGTCCCCGGACAGTTATCCGTCAAAAAACTAATGGTTTTGAG GACAAATATGTAATTAAACAAAAAAAATCAATTAAAATATAAAAAAAAAAACCCAAAAAATTCATCATCTCTCTTCTTCT TCCATCATCTTCATAATTTTCTCTAATATTAAATATCAAAATCATCTTCATCCTCTTTTTCATCTCACAAACATCTTTAA TTCTTTATCTCCTTCATCTCCAACTCCTTCATCCTCATCCTCATATCCTCATATACATACTAAAAAAAAAAAAAGAGATT CAGACCATAACCCACCCAAACATACTCGCACACACCCACACACACAAAGACCTTAATATCTCTCTCACACAATCAGCAAT AAAGATTCCAACTTATTCTATTTAAAAGATCAAAGGATAGCCCAGATGGAGTCAGATGCAATTATGCAACCCCATAACCA AATACAACAAAACAACAAGGAGCCAGTGATAAATTCACAGATCTCTAAGATTCGTTGGGAATGAGATTTATAGAGAGACA GAGAGTGATTTTCCTCTCTACGCTGAACGAATTGAAGACCTGCGATGAGAAAGAGCTGGGAGATCCACCCAAACCTACCA TGCTTGAAGAACTAATTCTTGCCAAGCCATTCAAGAGCAGGGTGGGTGAAAAAGTGAAGAGTAGCGCAATCTCGCTTGCT TTTGACTAGAGTTCATCGGATCTTCTATAAGCTCTCCTTCTAAGCTCTCCAGATCTGAGCATAGATCAATTTCTGGGAAT TTGATGTGTGTTGATGAGATTTGGGAAAAAATGTTTTCTGGGTTTGTTCTGTATTTTCTGGGTTTCAGGTGGTGATGGGT GAAGAAGAAGGAGGAGGAAGAGTGGTGGTTGAGGGTGGGTAAGTGCTATTAGAGAATATGTTTTGTGTCAATCTCAGTTT TGAGTTTGAAGATGATGCAGAAAGAAGATGAAGATCAAGGGGTTTTTTTGGACTAGAGTATTTTTTTAATTTTAAATTAA TTTTTGGGTTCAATTGCACTTTTGGTCCTCAAAACCGTTAGTTTTTAGACAGAAAACTGTATGGGGACCAAAAGTGTTGA CAGAGGTAAACGTCGGGGTAGCGAAATGCTATTTTTAAAGTTTGGGGATCCCATTTGCACAAATGAGAAATGTGGGGGAC CAAAAGTGTTAATAAGCCCAGAAACTACTATCTTTTATCTTCTTTGCAGAATTAATTTTGAGATTAAATTTAGTTCTCAA GCTATATCGATTGTCAATCATATATATATATATAACCATCTAAAATTGATTCTGCTCAATAAGAATTACTTATAAGACAT TCACATGTGCATGGAACCAAACACAATAATTCGGCCTTAGAAACAAAATTTTATTTGCTTACATAACTCAAATCTACACT CTGTTTATCCAAATCAGTAGCTGAGAAGTGCTTTAATTTGTGAAATTAGTGCGTTGCTCCTGCTTGGAAATCTGCTTTTA TGATTGATGAGAAGGAGCGTGAAAAGGCTGCTGAGGAATTATTTGAGGCTCTGCAGTTTCTTGAGAATGAGCTGAAGGAC AAGAAGTTCTTTGGAGGAGAGGAGTTTGGCTTTGTGGATATCGCTGCTCTTTTCATACCTTTATTTAAAGAAGTGGCTGA GTTCAAGTTGTTCACAAGTGACCAATTTCCAAAGCTATACAAATGGAGCCAAGAATTTTATAACCATCCAGTTGTGAAGG AAAATATGCCTTCTAAAGACCAACTTTTTGGTTATTTCAAAGCTCGCTCCGCAACCCTTGCTGCCTCAAGAAAATAGATT GAGTTAATTATTGCTTTTGAATTTCACTTTAGAATGAAATTTTAATCTATTATTATGTATTTCTCCTGAACTTTTTTTTT GGTTGAATCTATTTCTCCTGACATAAGAATAAGGTGTCGGTACTAATGGGTGGTTGGTTCAAGTGGTACATGTTTGATTT CTTTTAAGCAAAGTCTTGGGTTTGAGTCTTCTAGATGAAAAAAACTCTCGTTGGGAGAGTAAACCCCACCATAATGTGAA TGTTCTCAGTTCGAACATGATTACCTCTGAAGTAGGACATTTGTCTAACACCAAAATAATAAGGTGTCGGTGAAGTTTCA AGCATATTAGAATTGGATTCATATCCCACACCAATTAACACACAACACATAAACGAACTGCACTTCTATTATTGCATTAG AAGTGTTATATGTCATGACAAATAGCACGACAGCGAACCGATCAAGATGAAAATTCATGAATGATGGACCAACATAAAAA AATGGAAAGAAAAGTTAAATGATGCTAAGTGTGTCCCTAATGGTTTTCTTCTGTGCCCCACCTTGGCCTTTTCACTATGA AGCTGTTCGGGCTTCTCATCCCGATCAGGTTCTAAATTGCGGACCACAACACATGTTGCGGCCGCAATATTGCCGTTGCG GAGCGCACCGCAATCACATCAGGCTGCAATTGCGGTGAGATATAATTTCTCCTGCAACAACCGCAACATAATCGCTTTTA CCCCGCAACAGAACCGCATCAGCATATCAGTTGGTTAGATCGACATTTCTGGTGG
CDS sequence (LotjaGi1g1v0577000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGGAAGTGAGGAAGAGGTGAAGCTTTTCGGATCTGTGGGAAGCCCATTTGTGATCAGGGTTCAGATTGCTCTCAA ATTGAAGGGAGTTGAATATAATTACCAGGAAGAAACCTTGGGCAGCTTGAGTGATACGCTCCTCAAATTCAACCCAGTTT ACAAGATGGTTCCTGTGTTTCTTCACAAAGGGAAACCTATTTCAGAGTCCCTTGTGATCCTGGAGTACATCGATGAGACA TGGAAACACAACCCCATCTTGCCTTCTGACCCTTACCAGAGAGCCATGGCCAGATTCTGGTCCAAGTTCATAGATGATAA GTGCGTTGCTCCTGCTTGGAAATCTGCTTTTATGATTGATGAGAAGGAGCGTGAAAAGGCTGCTGAGGAATTATTTGAGG CTCTGCAGTTTCTTGAGAATGAGCTGAAGGACAAGAAGTTCTTTGGAGGAGAGGAGTTTGGCTTTGTGGATATCGCTGCT CTTTTCATACCTTTATTTAAAGAAGTGGCTGAGTTCAAGTTGTTCACAAGTGACCAATTTCCAAAGCTATACAAATGGAG CCAAGAATTTTATAACCATCCAGTTGTGAAGGAAAATATGCCTTCTAAAGACCAACTTTTTGGTTATTTCAAAGCTCGCT CCGCAACCCTTGCTGCCTCAAGAAAATAG
Protein sequence (LotjaGi1g1v0577000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGSEEEVKLFGSVGSPFVIRVQIALKLKGVEYNYQEETLGSLSDTLLKFNPVYKMVPVFLHKGKPISESLVILEYIDET WKHNPILPSDPYQRAMARFWSKFIDDKCVAPAWKSAFMIDEKEREKAAEELFEALQFLENELKDKKFFGGEEFGFVDIAA LFIPLFKEVAEFKLFTSDQFPKLYKWSQEFYNHPVVKENMPSKDQLFGYFKARSATLAASRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 219 | 219 | 2.5E-116 | – | |
| PANTHER | 1 | 219 | 219 | 2.5E-116 | – | |
| Gene3D | 4 | 86 | 83 | 8.4E-34 | ||
| SFLD | 5 | 220 | 216 | 0.0 | – | |
| SFLD | 5 | 220 | 216 | 0.0 | – | |
| ProSiteProfiles | 6 | 85 | 80 | 19.176 | ||
| Pfam | 7 | 79 | 73 | 7.9E-15 | ||
| SUPERFAMILY | 8 | 108 | 101 | 1.44E-24 | ||
| CDD | 8 | 81 | 74 | 4.50367E-39 | – | |
| SUPERFAMILY | 79 | 213 | 135 | 6.96E-40 | ||
| Gene3D | 87 | 221 | 135 | 1.6E-45 | – | |
| ProSiteProfiles | 90 | 210 | 121 | 20.886 | ||
| CDD | 91 | 213 | 123 | 4.88525E-40 | – | |
| Pfam | 113 | 194 | 82 | 3.1E-16 | ||
| Coils | 121 | 141 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0577000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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