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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0581300 |
| Transcript ID | LotjaGi1g1v0581300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2C family protein; TAIR: AT1G07630.1 pol-like 5; Swiss-Prot: sp|Q9LQN6|P2C04_ARATH Probable protein phosphatase 2C 4; TrEMBL-Plants: tr|A0A151U4S1|A0A151U4S1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0581300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:112058531..112061599) extracted from Lotus japonicus Gifu genome v1.2.
CTTTATTGTTCTTAAATAATACATCAAAGTCAACACACCCTCCCTTGTTTCTCTCCTCTCATTCTCTTATGAACCAAAGC ATACTCAAGTTAAACCTTGTTCTGTTCTTATTCCATTTCCTCTCTTTCTCTTTTTCTCTGTAATGCAAGTGTTAGAAGTT GCAGCTCAAAACTTTAACTTTGCATTGCATTGCACCCTCCAATGGGTAACAGAATCGGAAACCTCTGCCTCTGCTCCGCC GGCACCGGCGTCGGAGACATCTCCGGCAGATCGGAGAACAAATGCGATAAAGCTAATGTAAACTCCATCTTCTACGTCAG ACCAGACCCATGTGAGTTTTCCGGCGATGGCGCCGCCACCATCGTGCCATTCCGGTCCGTTTCCGTAGCCACCGTGAGCG CAAACTCGTCAGCAGCACCGTCCACTTGCCTTGATGACTCTGTTCAGCACAGCATCGCTCTGGATTCCTCTGCTTCATTT GAGAGCTCTAATTCTTTTACTTCTGCCGCGACGGTGCCTCTGCTGCAACGTGGCTTCGCTGTGGGTGGCTTCAGGCCAAG TCCCCGTGATGGCGGCGCTTTGAACGGTGGTTCTGAACCTGTGGAGAAACAGAGAAGAAGCTTGAAGAAGGTTCTGAGCA GAGCATTTTTAAGCTCACTGTCTCTTGGGAAACGGCCAATTCTGAAGAAAAAAGAGAATGGTAATGCCAGAGTGAGTTGC AGTGGTCCTCTTGATGGTGATGATGATGATGATCTTGGTGAGTGTGATGATGATCTGTTCATGGGGTGTCAGAATCTTCA TTGGACTCAAGGTAAAGCCGGTGAGGATCGTGTGCACATTGTGATTTGTGAGTATCATGGATGGGTTTTTGCGGGGATTT ATGATGGATTCAATGGCCCTGATGCCACTGATTACCTTCTCAATAATCTGTTTTCTGCTATTCATGATGAGATCAATGTG CTGCTTTGTGGTCACATTTCTGAATCGGAGTTATTAGAGGAAAACTGTCCAATGGGAAGTGAAAAGTCAGGTTTGGATTG TAAGAAAGATGATGTGTTAGAATCACTTTCTGAGGCGTTGAAGAAGACAGAGGATGCGTTTCTGAGAACTTGTGATGAGA TGATTGCTCATAATCCTGTGTTGGCTATGATGGGTTCTTGTGTTCTGGTGATGGTGATGAAGGGAGAAGATGTTTACTTG ATGAACGTCGGAGACAGTCGTGCTGTGTTAGCTACTCAGTCTGGGGATCCCATTCAGCTCACAGAAGAGCATAGCACTCA TGTCAAAGAGGTAAAACAAAGTTGTCTTTTTTTTTTACAAAATTGTGAGAAATAAAGATAATTGATCTTTTACGAAAGGG AGTGATTGGTTCACATGGCAATAATTATATCTTCACACATCAAAAATGAGGTGTGAAGAGGTGGATGAAGAGAGAGATAG GAAGAAATGAGAGAGAAAGTAAAGATGTGATAGATGATTTGATTGATAAAGAAAAAAGAAATAGATAGAAATGAAGATGA AAAAGGAGTGGAGAGATATGTATATTTTCTTTAAGTAAGGTCTCAAGTTCGACTCTTGTGGATAAAAAACCCCTTTTGGG AGAGTCCACTAGAATGTGGATGTTCTCAACTCGAGTAGAATTGTCTCACATGGAAGATACTTAGAAAAAAAATAATTGGC ATTTAATTTTAATTAAGTTCATTCATATGATGTATCACAATTTTTGACATCTTGTTTCTCAATCCCCTAGGAGGTTTACA GAATCAGAAGGGAGCACCCAGATGACCCTTCTGCAGTGACTAATGGCCGAGTGAAAGGTTACTTGAATGTCACAAGGGCT TTCGGAGCTGGATTCCTTAAACAGGTAATTTCTTGGTCAATGCTGAACTGCTTTTAGGTTACCGTTTTTCCCTTTCCTTT TATGTTTAATTAGATTATTTTGCATATTCTACACTCCAATTTCACCCCACATTCAAGACTGAGATATGATGAGCGATAGG ATTAGTCTTAATTGCTTGTGCTGAGAAGTCTCGTATTGACTACCGTCTAGAGATATCATATAACTAAATTAGTTTTATGA AGAGTAAGACCAACCCTCACTCTTGAGTTAACTTTTGTGGTGGAATTGAACCTAATCTAAAGTCTAAGAGTTTGATTAAG GCCCCAAATGGAAGAGCTTATTTTATAGCATAAGCGATTATGAAGATGTTTAAGAGAAGCCTATGTTGATAGATAGCTTA AAGACTACACTTAAGTTGTTTTAAGTCTATTTTCAAATAAGCTAGTATATTTTTAAATTAGCTGCTCATATTAGTTTATG AATAAAACTTTATGTTTATTTAGGACTTATTTTTAACTTATTTCAATAAATTTATTAAGTGGGCTTAAAAATAAGCGCTT ATACGAGAAGCGCTTCATTAACATATTTGCGTAAATTACTACACTGACCCTCTTGGTCCATTGTGCAGCCTAAACAAAAC AATGCAGTGCTGGAGACTTTCAAAGTTAACTACATAGGGGAATCCCCATACATAACTTGTTCCCCTTCCCTCCACCACCA CAGGCTCAGCCCAGATGACAAATTCCTAATACTGTCTTCTGATGGACTTTACCAATTCTTCACCAATGAAGAAGCCGTTG CCAAAGTAGACTCATTCATCACCATGTTTCCTGATAGAGATCCAGCACAGCTTCTTGTTGAAGAAGCTCTAAGTCGAGCA GCCAATAAAGCAGGTATATATAAATTAAGAACTTCTCCTCAACTATATATATTTCTTCATGATAATTCAAAATTAAACAT TCTTAGTGAGCTTGACTTTATTTATTAATTACAGGATTGGAGCTCCATGAGCTGCTGGATATCCCACAAGGGGAACGGCG TCTTTACCATGATGACATTTCTATAATTATAATCTCATTTGAGGGAAAAATATGGCGTTCTTTGGTGTAAAATTATACAT GTAGATCATAATGTAATTTAACAACTAATTACAGTGACTAACTGAAATAAAGCTTGGGGAAATTATCCTCTTTTTCTTGA TTTGGTTACTTGTTTTGCTACCCATTTTA
CDS sequence (LotjaGi1g1v0581300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAACAGAATCGGAAACCTCTGCCTCTGCTCCGCCGGCACCGGCGTCGGAGACATCTCCGGCAGATCGGAGAACAA ATGCGATAAAGCTAATGTAAACTCCATCTTCTACGTCAGACCAGACCCATGTGAGTTTTCCGGCGATGGCGCCGCCACCA TCGTGCCATTCCGGTCCGTTTCCGTAGCCACCGTGAGCGCAAACTCGTCAGCAGCACCGTCCACTTGCCTTGATGACTCT GTTCAGCACAGCATCGCTCTGGATTCCTCTGCTTCATTTGAGAGCTCTAATTCTTTTACTTCTGCCGCGACGGTGCCTCT GCTGCAACGTGGCTTCGCTGTGGGTGGCTTCAGGCCAAGTCCCCGTGATGGCGGCGCTTTGAACGGTGGTTCTGAACCTG TGGAGAAACAGAGAAGAAGCTTGAAGAAGGTTCTGAGCAGAGCATTTTTAAGCTCACTGTCTCTTGGGAAACGGCCAATT CTGAAGAAAAAAGAGAATGGTAATGCCAGAGTGAGTTGCAGTGGTCCTCTTGATGGTGATGATGATGATGATCTTGGTGA GTGTGATGATGATCTGTTCATGGGGTGTCAGAATCTTCATTGGACTCAAGGTAAAGCCGGTGAGGATCGTGTGCACATTG TGATTTGTGAGTATCATGGATGGGTTTTTGCGGGGATTTATGATGGATTCAATGGCCCTGATGCCACTGATTACCTTCTC AATAATCTGTTTTCTGCTATTCATGATGAGATCAATGTGCTGCTTTGTGGTCACATTTCTGAATCGGAGTTATTAGAGGA AAACTGTCCAATGGGAAGTGAAAAGTCAGGTTTGGATTGTAAGAAAGATGATGTGTTAGAATCACTTTCTGAGGCGTTGA AGAAGACAGAGGATGCGTTTCTGAGAACTTGTGATGAGATGATTGCTCATAATCCTGTGTTGGCTATGATGGGTTCTTGT GTTCTGGTGATGGTGATGAAGGGAGAAGATGTTTACTTGATGAACGTCGGAGACAGTCGTGCTGTGTTAGCTACTCAGTC TGGGGATCCCATTCAGCTCACAGAAGAGCATAGCACTCATGTCAAAGAGGAGGTTTACAGAATCAGAAGGGAGCACCCAG ATGACCCTTCTGCAGTGACTAATGGCCGAGTGAAAGGTTACTTGAATGTCACAAGGGCTTTCGGAGCTGGATTCCTTAAA CAGCCTAAACAAAACAATGCAGTGCTGGAGACTTTCAAAGTTAACTACATAGGGGAATCCCCATACATAACTTGTTCCCC TTCCCTCCACCACCACAGGCTCAGCCCAGATGACAAATTCCTAATACTGTCTTCTGATGGACTTTACCAATTCTTCACCA ATGAAGAAGCCGTTGCCAAAGTAGACTCATTCATCACCATGTTTCCTGATAGAGATCCAGCACAGCTTCTTGTTGAAGAA GCTCTAAGTCGAGCAGCCAATAAAGCAGGTATATATAAATTAAGAACTTCTCCTCAACTATATATATTTCTTCATGATAA TTCAAAATTAAACATTCTTAGTGAGCTTGACTTTATTTATTAA
Protein sequence (LotjaGi1g1v0581300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNRIGNLCLCSAGTGVGDISGRSENKCDKANVNSIFYVRPDPCEFSGDGAATIVPFRSVSVATVSANSSAAPSTCLDDS VQHSIALDSSASFESSNSFTSAATVPLLQRGFAVGGFRPSPRDGGALNGGSEPVEKQRRSLKKVLSRAFLSSLSLGKRPI LKKKENGNARVSCSGPLDGDDDDDLGECDDDLFMGCQNLHWTQGKAGEDRVHIVICEYHGWVFAGIYDGFNGPDATDYLL NNLFSAIHDEINVLLCGHISESELLEENCPMGSEKSGLDCKKDDVLESLSEALKKTEDAFLRTCDEMIAHNPVLAMMGSC VLVMVMKGEDVYLMNVGDSRAVLATQSGDPIQLTEEHSTHVKEEVYRIRREHPDDPSAVTNGRVKGYLNVTRAFGAGFLK QPKQNNAVLETFKVNYIGESPYITCSPSLHHHRLSPDDKFLILSSDGLYQFFTNEEAVAKVDSFITMFPDRDPAQLLVEE ALSRAANKAGIYKLRTSPQLYIFLHDNSKLNILSELDFIY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 41 | 491 | 451 | 8.1E-132 | – | |
| PANTHER | 41 | 491 | 451 | 8.1E-132 | ||
| Gene3D | 189 | 500 | 312 | 2.5E-76 | ||
| ProSiteProfiles | 192 | 504 | 313 | 35.733 | ||
| SMART | 192 | 513 | 322 | 3.8E-51 | ||
| SUPERFAMILY | 204 | 485 | 282 | 6.41E-49 | ||
| CDD | 205 | 487 | 283 | 2.3787E-54 | ||
| Pfam | 288 | 486 | 199 | 8.8E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi1g1v0581300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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