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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0581500 |
| Transcript ID | LotjaGi1g1v0581500.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectin acetylesterase; TAIR: AT3G09410.1 Pectinacetylesterase family protein; Swiss-Prot: sp|Q9SR22|PAE5_ARATH Pectin acetylesterase 5; TrEMBL-Plants: tr|G7L4F5|G7L4F5_MEDTR Pectin acetylesterase; Found in the gene: LotjaGi1g1v0581500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:112066824..112072925) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTATGTTTTGGCTGGATTGCAAGTTTCATAAGTTGACTCTTTTGCACAATCCCATTTTTCCATTCTCTATCGATCAT CACGCTGCGATGTCTTCATCTCCCTCGTTCTCCATAACCAACCTTCGCCTTCGCACTCTCGTCGTCTTCTTCAGAAAATT GACCACCAAGGACTACGCAATCGCCGCATTCGCCTTCTTCCTTCTCCTCTCTCTCGCTTTCTTCTCCCAATTGCATCACC ACCACCATTCCCACTCTCTCTCCAATCTCATCCCCTTCACTCCTCTCCCTAACACCATCCTAAGAGGCGCAAGTACGTTT CAACTTACCTAAACGCCTTCCGAATCGAGTCTGGGTTCGTGACGTGATTCTAAATTTTTATGTGCAGTTTGCTTGGATGG AAGTGCCCCCGGCTTCCATTTCCAAAAGGGTTTCGGATCCGGATCTCGCAGTTGGTTGCTCCATCTCGAGGTTTTTGCTT ATTATTTTCGAAAATATTTGCTAGATTGTCTCTTTGAATATGATGCAATGCAATGTGATGTAAAAAGAAATTAAGTGGTG GATGTAGTGTTCAAGTATTTACTAATGAATACTCCCTCCGTTCCATAATATAGGTTGTTTAAGGTTATGTACATTGTTTA GGAACCAGTGTTGTCAAATCGCCATCGCGGACCATTGCGGTGAGTCAAAAATCCGCTACGCAGCGCCGTTATTTGATAAC ACTGTTAGGAACTTGTTATTTGATAAATATCTTAAATACTCCTATTTAAGTCGTGTTATATTAAGGAGAAAAAAATGTTA TTATTGGTAAAAAGCATAGTGTGAGTTGTGATAGGTGAAAATTGAAGGTGATAATTAAGAGATATAATATTAAATGAGGG TATATAATGAAGAAAGAGAAAAAAAATACTTTGAATGTGCAAAACAACTTATATTTTGGAAATGAGGGAGTATTGTTTTA TTATTTCTATTATGTGAAATTGGGTTTCTTTTGAAAATTGTATTGATCTGGTTTCAAATGTATGTACAGGGAGGAGGATG GTGCAATTCGATATCTTCATGTTCTCGCCGAAAATTTACTGCTTTGGGTTCATCCAAGTATATGGAGACGGTGGTTCCTT TTTCAGGGATTCTAAGCTCTGACCGGTCTCAGAATCCTGGTAAGTTACTGTTAGTAACACTCACTGGCTTGCTACTTTTT TCATTCATGAACAATATCTTGGTCTTTTCTTCTTTTTTTCAGTGTTGTAGGAATTTGCAACTTTTTTATTTTGATCTTTG CTTCTAATTGTTAAGTAACTTTTGTATTTAATTCAATGAATACATGCGTTTTCAATAGATGCGCTTTACTTTTGGTTCGT TAACTGTTACCTTAAGGGCACTAGATACCATGTTGTCAAGACACTGGGGTTCAAATGAAAGGAGGGGGGAAGGGAAGGAT GAGAGGAAATTAAAGTTCCTTTGGTTGATTGAAGGGAATGGAATTAATTTTTTATCATGCTCTTGAAGGTGGAGAAAAGG AGGCAACAAAAACCTTACGGATATGACTTGAATTGTTCTGAAGAAGCTCCAAGACTGAGCCTTTATTGGCATGAAAGTGA AGAAGCTCATAGGGATGAAGTAACCTTGGTAAAAGGTTCCCAGTAATAATATATGTAAGGATGGTTTTCGATTAAAAAGT AATTGAAGGCAATTTAGTCAGTACAATACACTAATTTCAAATGATTTTTCCTCTCCTCTAAGGGGAGGCAAATATTGAAA GGGAGGGATTTTTGGCACTTCATTATCTCCCCCCCCCCCCCCCCCCCCCTTTCCAAATTTCTGAATCAAGCAAGTAGTTT TTATCTTAAAATTCTTCCCTGCCCCTCCCTTTCCCTTCATTTCCCTCAAAGCAGACAGTTAGTAAGACTTTACATTTGAT ATAGGGATGTAAATTTTTTTTTGTAGTATCATTGAATCATGTAAATTACCGCTGTTATAATGTTGATTTGTGTGGTGATA TTTTCCCTCAAACCTGATTAAATATGCTGAGATCACCCTTAAATATGTATTTCTGGTGTTGACATGGTTTGGCTGCTTGA ATGTGTACAAAAGTCTATTGAATTAAGTGATGCTACTTTGTTGGATGTGTCAAACTTATTCAGATTTCTTTAACTGGAAC AAGGTGATGATACGGTATTGTGATGGTGCATCATTTGCTGGTCACCCAGAGAGCGAGGTTAGGGTTGGTTTAGCTTTGCA ACTTTGACTTCAGAAAGGCTATTCATTATTTGGAACTCTTGTCGCTCTTTGCGCTGCACATCAAGATAAGAAAGTTTTGT TCACATTTGAATTTATTTTGATGTGAGTTATTCATTATTATAATTATTCTATGCTGCAGAAAGGAAGTGGGTTGTTCTTC CGAGGCCAGATCATATGGGAAGCTATTATGGATGAACTCTTATCAATTGGCATGTCTAAAGCAAAACAGGTTACACTTTC ACTGCAATCCGACATATCTTTTCTTTTTTAAGAATTGAAATCTCTACAACTACCAGCATAGCAGTCAAAATCATGATTAT AATCGCTTAATCACACGATTATGTGATTAATGGTGCCCTTGGCGATTAAATTGCAGCTGTAATCATTTTCTGGCTTATTC GCAAGTTTAATTGCATAATCTCACCATAATCGCACTAGAAGATGAATGATGTTGTTATTTATGCTATTTTATATGCACAC ACACACATAGGAAATTTGCTAAACTTACAATTATGCGATTTAGGATTAAGATCCCCCTTCCTGATTAAAGTCATAATCCC AATTTTTCCTACTATGACTACCAGTGTTAATAGTGATGTCAGCAGCAGCAGTTGTATTAAAATAGATAAATAGTATCTGG TTGTTTGTCCGTCCTTTACTTAACTTTTATCACAATTTTTTCAGACATCAAAGAATGGCCAATTTGTTGTATATTTAATT CCATTAGTTCTGGACTTATTATTCTAAGGTATGCATGGCATGTAGTGAAGGGCATATTACTTGAATGTCATAAATCTTCC TGTCCTGTTAGTCATCATTGAAGAATTTTGCTTTATGAAGGCTTGAGTTGCTTAACACAAGAAAGAGATTCTTCTTTGCG ATGACTTGAGCAAGAAGCAAAATAGAAAGGGGTTGAGAGAGGGTCAAGAGCGAGGGGTCGTTTGGGATGAAGAGATTGTC AAGAGAGAGGGGGAAGTGTCGCGGTGGGTTTAGGGGATAACACTGAATGGTCTAACTTAAATTCAATTCACTCCAACTGA CATTATCTACTGTTTATGAATTATAATTCATGTGGTTACTTTTGTAGGCTCTGCTTTCAGGATGCTCTGCAGGAGGGTTG GCAACTCTTGTACATTGTGATGACTTTCGACAAATACTTCCAAAGGAGACCACTGTCAAATGTCTTGCTGATGCAGGCTT CTTCCTAGATGAGTAGGTTTCTTCCAACTTATCTTTGCCTTTTCTTACCATCATATATGTTCTAGTAAAATTGAAACTGA AAGTCAGCAAAAGTACTTGTCTCTTATTACCTTATTATGGGTGATCCTAGGATGATATTTGTTGATGAGAAATAAAAATT CATAACTAGAAGATTTAAGTTTCATAATTTCATTAACTATACTTGTATCTAGTGGATTGACTACTGATTTATACCTGCAT GTTGTATGGTCATCATTGTTCATGTCAATGCATTCTGTTACTAAGTTAAATAAATATTCATTCACAATTTCAGGAAGGAT ATTCGTGGAAATAACACAATGAGATCTTTCTATAATGATGTTGTGCAGCTTCAGGTAATGCTGTGCCTGCTTATATGTAA AATTGTCTTTTGGGTGTTCTAGCTGTACTTATCTATAAAGTATAAATAAAAAAACCTATACAAAATAGTTTTTCCACTAA TATAAATTGTCTAATTCCGACATCTTGTTATCAGGGTGTTGCAAAAAGTCTGCATAAAGAGTGCCTTGCCAAAATGGAAC CATCTAAGGTGGATTTTTAGTTTCTTAAAACTCGTTGCCACACCCTTTGGTATGGTCTGTGACTGTAAAATTTGATTCAT ATGTTTCAGCTAAGAACAACCAAGTGTTGATTTGTAATGCAGTGTCTCTTTCCATCGGAAATTCTTAAAAACATAAAGAC TCCAGTGTTCCTTGTTCACTCTGCTTATGATTTTTGGCAGGTAAGCTTCCTCAGTAGGCATATTTTATTGTTGTTAAATG TTTTGTTTTTCTATGACAGATATCTGATGCAAATTAGATTGTATTTAGATACGCAATATTTTGGTACCTGAAGGATCAGA TCCCTCTGGTCACTGGAAAAGCTGCAAATTGAACATTCACAATTGCAATGCAAACCTGATTGATATACTTAACCGTAAGT AACCATAGTTGCCATATATTTTCTGGATATCTTGTTAAAGACTTGATCTATTTGACATCAACCTTAAATAAAAAATCCTT TTTTAAAAAAAAAAATCACTTTGTAGTACTTCAATAGAATCAGATTCAGAATACCACAGGTGTTGGATTCAACTGTGGCA TAGATAATGCTGAGGCTTGAATAACATGGGATATTACTGTTATCAGGCTTCCGTAGTTCTTTGCTGAAGGCTTTGAATGA ATTCCAGCAACGGAAGCAGATTGGAATGTTTGTAAATTCTTGCTTTATCCATTGCCAGACTTGGAGGGGAGAGACATGGT ATTCACCCAATTCTCCTAAAATACAAAATAAGGTAACTTTAGTTTTGGCTCCTCTATTGAAGACTTTCACCAAATTTCCT TGTGGTTCTTGCTTTATGATAGTCATCTAAAAATAATGAAGTTCTATCACTGTTTTACAATTCCATTTTCTACCTTTGAA ACTGTAGTGCCAAGATTGTGGATATGCTTGCTTTGTATGTCTTTGGAAACACATTCTAAATGTATGTTTAGACCAACTTC CATTTAGACCAACTAAATGCATGTTTGAATACACGGGGGAAACCATGGTGAGCCAGTAACACAGTGAACATAAGCAACTT CCCTTAGCTTTTATGGCTATACACGGTGATTTTTGACTTCATCGTAGATTTCCGCTAAACATGCACTGAAGCCAGGTCTT CCTTGCACGTTTTAAGACCTTGGAACTTGTGCAAGCAAACATATTGCATGTTTGGTTGTGCGTTTGGAGCACCCAAACCA CGTTTCCAGTCTACAAAACGTGGTTTTGTGATTTTTTAACATGTTTAAAAATAGGTTGGCCAAATTTTTCAAATGTGGTT TGGGGATGACCTGTGATTTTGGTAGAAGCGCAATTATTTTCACCTTTTGCATTCTATTGGATAAATGTCAAACATAAATC ACTGTATTTCAAACCACTTAGTTCGTTCGAAACCATATTTTGCAAGCGCTCACCCAAACACATACATAGCCATTATGTGG TTGGATTGAATAACTGACACTTTGTAGTGAGTTTTGACATGTTTCCTCTTTTTAAAAAAAATTATATATGATCTTTTAAT ATACATTGACACTCAAAATTCATAAATTTGAAAAGTTATAATCTTGGTGCATTACAAAGGATGTGTAACTTAAATATGAA TGACTTCAGGGTTATTACATTTCCTTTAAGAAAGTCTATGACTTCAGTCCCTATCTGGTTTAAATTTTAGCTTTCGAGCT TATTGTTCTTCTTGCTATCCTTGACTGATGTTGTTTCTGGAGCAGACGATTGCTGAATCTGTTGCTGATTGGTTCTTTGA CCGAGAAGTGATCAATCTTATTGACTGCCCTTATCCATGCAATCCTACTTGTCGTAATTTGGATTTTACCAGAGTATAAT AAAGCTAAGGGGACCATTCTCATTGCCTGATTAATCATGAATCTGCATTTCTTGAAGTTCATGAAGGAATATTCTCCTTT CCTTAGCATGAATTTTTTCATTATTTAGTTGAAATTCTGGCGGTAGCTCATCTTATTCCCCCTGTTAAAAGCTACAAGTC CCACATTGGTGGGATGAAGAAGAAAATTATAGTAAAATTCAATTCAAATGTATAATTTATTTGACAATATCTAAATTTGT AATATTTTCCCTTATGCAGCAT
CDS sequence (LotjaGi1g1v0581500.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTGGCTGGATTGCAAGTTTCATAAGTTGACTCTTTTGCACAATCCCATTTTTCCATTCTCTATCGATCATCACGC TGCGATGTCTTCATCTCCCTCGTTCTCCATAACCAACCTTCGCCTTCGCACTCTCGTCGTCTTCTTCAGAAAATTGACCA CCAAGGACTACGCAATCGCCGCATTCGCCTTCTTCCTTCTCCTCTCTCTCGCTTTCTTCTCCCAATTGCATCACCACCAC CATTCCCACTCTCTCTCCAATCTCATCCCCTTCACTCCTCTCCCTAACACCATCCTAAGAGGCGCAATTTGCTTGGATGG AAGTGCCCCCGGCTTCCATTTCCAAAAGGGTTTCGGATCCGGATCTCGCAGTTGGTTGCTCCATCTCGAGGGAGGAGGAT GGTGCAATTCGATATCTTCATGTTCTCGCCGAAAATTTACTGCTTTGGGTTCATCCAAGTATATGGAGACGGTGGTTCCT TTTTCAGGGATTCTAAGCTCTGACCGGTCTCAGAATCCTGATTTCTTTAACTGGAACAAGGTGATGATACGGTATTGTGA TGGTGCATCATTTGCTGGTCACCCAGAGAGCGAGAAAGGAAGTGGGTTGTTCTTCCGAGGCCAGATCATATGGGAAGCTA TTATGGATGAACTCTTATCAATTGGCATGTCTAAAGCAAAACAGGCTCTGCTTTCAGGATGCTCTGCAGGAGGGTTGGCA ACTCTTGTACATTGTGATGACTTTCGACAAATACTTCCAAAGGAGACCACTGTCAAATGTCTTGCTGATGCAGGCTTCTT CCTAGATGAGAAGGATATTCGTGGAAATAACACAATGAGATCTTTCTATAATGATGTTGTGCAGCTTCAGGGTGTTGCAA AAAGTCTGCATAAAGAGTGCCTTGCCAAAATGGAACCATCTAAGTGTCTCTTTCCATCGGAAATTCTTAAAAACATAAAG ACTCCAGTGTTCCTTGTTCACTCTGCTTATGATTTTTGGCAGATACGCAATATTTTGGTACCTGAAGGATCAGATCCCTC TGGTCACTGGAAAAGCTGCAAATTGAACATTCACAATTGCAATGCAAACCTGATTGATATACTTAACCGCTTCCGTAGTT CTTTGCTGAAGGCTTTGAATGAATTCCAGCAACGGAAGCAGATTGGAATGTTTGTAAATTCTTGCTTTATCCATTGCCAG ACTTGGAGGGGAGAGACATGGTATTCACCCAATTCTCCTAAAATACAAAATAAGACGATTGCTGAATCTGTTGCTGATTG GTTCTTTGACCGAGAAGTGATCAATCTTATTGACTGCCCTTATCCATGCAATCCTACTTGTCGTAATTTGGATTTTACCA GAGTATAA
Protein sequence (LotjaGi1g1v0581500.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFWLDCKFHKLTLLHNPIFPFSIDHHAAMSSSPSFSITNLRLRTLVVFFRKLTTKDYAIAAFAFFLLLSLAFFSQLHHHH HSHSLSNLIPFTPLPNTILRGAICLDGSAPGFHFQKGFGSGSRSWLLHLEGGGWCNSISSCSRRKFTALGSSKYMETVVP FSGILSSDRSQNPDFFNWNKVMIRYCDGASFAGHPESEKGSGLFFRGQIIWEAIMDELLSIGMSKAKQALLSGCSAGGLA TLVHCDDFRQILPKETTVKCLADAGFFLDEKDIRGNNTMRSFYNDVVQLQGVAKSLHKECLAKMEPSKCLFPSEILKNIK TPVFLVHSAYDFWQIRNILVPEGSDPSGHWKSCKLNIHNCNANLIDILNRFRSSLLKALNEFQQRKQIGMFVNSCFIHCQ TWRGETWYSPNSPKIQNKTIAESVADWFFDREVINLIDCPYPCNPTCRNLDFTRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 56 | 56 | - | – | |
| Phobius | 57 | 76 | 20 | - | – | |
| TMHMM | 57 | 79 | 23 | - | – | |
| PANTHER | 63 | 453 | 391 | 2.9E-176 | – | |
| PANTHER | 63 | 453 | 391 | 2.9E-176 | ||
| Phobius | 77 | 455 | 379 | - | – | |
| Pfam | 87 | 432 | 346 | 2.3E-156 | ||
| SUPERFAMILY | 193 | 341 | 149 | 3.62E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0581500.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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