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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0583100 |
| Transcript ID | LotjaGi1g1v0583100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | B3 domain-containing transcription factor ABI3; TAIR: AT3G24650.1 AP2/B3-like transcriptional factor family protein; Swiss-Prot: sp|Q01593|ABI3_ARATH B3 domain-containing transcription factor ABI3; TrEMBL-Plants: tr|A0A0R0IX89|A0A0R0IX89_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0583100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:112240564..112244942) extracted from Lotus japonicus Gifu genome v1.2.
GTTTGAACGGATGGCTGCAGGCACAAAATCCGGAGTGAGAAAGAGAAACTAGCGGCACGAGTAGTTTTGGTTTTTCTGCT TCATTACTTACATCTATCTATCTTCCATCCAAAACTGCCTTTCTCTCACTCTAAAACCACCCATTACCCTCTCTCTTACA TAATATGCTTTGTTTTTTCTAGTGGGAAAACTCCCAAACCCCATTTGAACTTATCTAAGAAAGAGAAAAAAATTGAAATA AGAAAATAAACTCCCCAGAAGAAACCAGAACACACACATGGGTGGTTGTCTATGTTAAGTTTCAATCAATTTAAGCATGT GGTGTCCTTGAAATTGTCATGGTCACGTTAAGGCCTTGATTGGCTTTCTGGGTTTGGGAAGAATCTCTGGTTTTTACCCC TTGGCTGCTGTGTTAGTGTTACCCCTCCTGAAAAGTTTGGTATTTTTGAAGAGATCATCATCAACTTTAATTTTTGTGTT GTTCTTCCCAGTTCTCCTGTGTTGTTTGATTGATGTCTAATCAGTTTGATTATGACACAATTTGAAATAAAATAGCAATG AAACTGGTTTTGAAACAGTAAACGTCGCTTTCTTTGAAGGTAAGAGAGGGTTTTATTATATATTGCAACTTGTTTGATCC TCTCGTGAACTGTGTGGGTTGATGTATAGAATCAGATGTTTTCTGTTGCAACCCTTCTTAGGATTTGAAACAAAATAACC TTATCTCCTTTTGCTTCCTTAATTGGATACAACAATACCATACCAGATCTTCCCCTTTTGTACTGATAAGTACAACAAAG AAAGAAAAATTATCACTCTTTCTCTATATCTTAGTTTCTCTCTCCTCTTTTTTTTTCTTTGTCTAAACCTAACACCCATA CCATATCTGAAAGAAACCTACTGCATTCAACAAAGGATTTTTCAAAGATCTGTTGATGAATGATGGAGTGTGGAGTTGAG TTGCAAGGAGGAGTAGATCTGCATGCAACAGAAACAGTTGACCCTGTTGTTGGTTTTGGCACCACCTTGGAGGAAGAAAG AGATATGTGGCTGAACACTACTGACCAAGATGATCTCTTAGGTGTAAACGATGCTACTGCTTCCATGTTCTACTCTGATT TCCCCTCTCTCCCTGATTTCTCATGCATGTCATCATCATCATCTTCTTCATCCTCAACACCTGCACTTCCATTGAACAAC ATAGCATGCTCCACCACCACAACCTCCTCCTGTTCCTCCGCCTCTTCCTCTTCTGCCGCTTCGTGGGCGGTTCTGAAATC AGATGCTGATGTGGAAGAGAAAAACGGTTACATGCAGCAGCAGCATCAGCATCAACAGCAAGATCCGATAGATCATGCAA TAACAAGAACACCGGTTACTGGGGCTTTGTCTTCAACTGCTTCCATGGAGATTTCACAACAACAGCATGATCCTGTTATT GTTGGAGATTGCATGGATGGTGTGATGGAGATGGATACTTTTGGCTACATGGAGCTTTTAGAAGCCAATGAGTTTTTTGA CCCTGCTTCCATTTTTCAGAATGAAGAGAATCCATTAGTGGAGTTCACACAGCAAGATCAACATCCACATGCAACGGTGT TGCAGAACATGGAATTATCTGCACCTTTTCAAGGGACAACAGAGGAGGATCAGATTCTTGAATCTGTTACTGCTACCAAC AATAATGAGGAAGAAATTATCCAAAGAGAGGAAGAAGGTGGTATTGGTGGTGCAGATGATGAAATGAGCATGGTGTTCTT GGAGTGGTTGAAGTCGAACAAGGATAGCGTCTCTGCCAATGACTTGAGAAACGTGAAGCTCAAGAGGGCAACCATAGAAA GCGCCGCGAGGCGATTGGGTGGAGGGAAAGAAGGGATGAAGCAATTGCTAAAGCTCATTCTTGAATGGGTTCAAACCAGC CATCTTCAGAATAAGAGGCGCAAGGACAATAACAACAACAACAATATTGCACTGCCACAACAATTTCTGGATCCTTGTCA GAACCAGAACACTAATGGTAATTCATTTGCACCTGATCAATCAAACTCTTGTTTCAACCAGAGTACTACAACCTGGCTCT CTTCGCCACCGCAGCCGCCAACAAATGCTACTTTTGGAGCAGATCAAGCTCCTCTCATGGTGGCTCCGTTTTCACAACCC ATGGTTGGATATGTGGGTGACCCTTACTCTGCTTCAAATAACCATAATAACCCTTACCAGCCTGCTGCTACTGAATACCA CATGATGGAATCAACTCATCCATGGCCTGCTCATCCTAATTCTCAGTTCGCTGTTGCTTCTCACTATAATCAATCATTTG GGGACAACAGCCTTCTTCAACCAGCGGCGTTCGGAGGCTACGGTGGCAACCAGTATCCTTATCAGTTTTTTCATGGCCCT GGTGATAGGTTGATGAGATTAGGACCCTCGGCTACAAAAGAAGCGAGGAAGAAGAGGATGGCGAGGCAGAGAAGGGTTTT GTCTCATCACAGGCATCATAATAATCACCATCAAAATCAAGCTTCTGACCCACATGCAATGTTGGGAACTGATAATTGCA CCGCTGTTATGGCTGCAAATCCGGCCAATTGGATGTACTGGCAGCAGACCATGGCACCAGTGGTACCGGCTGAGCCACCA CAGGCGCAGCAACCAGCTCATCAGCCGGCAGAGCGGCCCTCCATGCAAACACAGAATAGTCATCAGGGCCGAGGCGCTGC GTCAGATAGGAGACAGGTTGGTGGTGCTTTTTTTGGTTAAGTTAATGTTGCTAGTTAATTTGTGTTTGCTAATTGATTAT ATGTGATGTGAAATTATCAAAAATTTATATGCATCAGTTTGTTTCTGTTTTCTTTCAATTTATGAACATTCTCAGTTTTT AAGACCAGAGTTTTAAATTATGGTAGCGTCGCGGCAGCAGCGCGTTGCCAATCCGGGGACTTGAAAAGCGGCCGCAATTG CGGTTGCGGACAACAATTTGAAACTCCGGTTAAGACTGTTACGTGTTTTCTTGATTAATATATAATGAGTGGCTTATCAA CTGGTTATTTGTTTGATTGATTGATAGGGTTGGAAGCCTGAGAAGAACTTGAGGTTCCTTCTGCAAAAGGTGTTGAAGCA AAGCGATGTGGGAAGTTTGGGGAGAATTGTTTTGCCAAAAGTAATCCTTTATCTACTAGCTAGTTAGTTATTTTCTCTTG ATCAGCATATAAAAACAAAAAATCCTATTTATATCAGTTAATTTTACTTTGGTGAAATTAAATATTTTGCACAGAAAGAG GCAGAAACTCATTTGCCAGAACTGGAGGCAAGAGATGGAATTTCCATAACAATGGAAGACATTGGAACTTCTCGCGTTTG GAACATGCGCTACAGGTTGGTATTCAAAACTCCATCGCCAATTTTGTATGTTGCATTTTTTGTTCTACATTTCTGCTGCA TTGAGACTAAAATTTTCTCATTTGAATGATTTCTTCTTGGAGCATCAGATACTGGCCAAACAACAAAAGTAGAATGTATT TGCTTGAGAACACTGGTGTGTTTTCTCTCTTCTGATTTGGCTTACTCACTAGCCTTTTGTGCTAAACCTTTTTCCTCACT TTCATTTTTAATGAACTGGATTTTTCATGTGATTTTGCAGGGGACTTTGTTAGAGCCAATGGACTCCAAGAGGGAGATTT CATAGTGATATATTCAGATGTGAAGTGTGGCAAATTTGTAAGAACCTTATCTCTAATTTTGCAATTTTAATTTTTAATTA TATTATATTTCTTGGTGTATGAACTTTTGAATTATGTAAGTCTATTTTTCTTTTAAAATGCTGATTATTAATTGGAGGGG ATTTTTTTTTTCCCAAACAGATGATTAGAGGAGTGAAAGTGAGGCAACAGGGGTCAAAACCAGAGACCAAGAAATCAGGA AAATCGCAGAAAAACCAGCAGAATGGGATCAATGCAGCAAATACAGCTGGAGCTGCTGTTGGTAATAATGGCATACCATC TTCACAGAAGCAAAAAACAGAGAAGGGAGTAAATTAAATATGAACATAGCTAGTATGCATGTATAATAATATAAATGAAT TTGTAGAATAAATGTTGTGGAGTTTTAGCATGCTCCCTGATGGATGGAGGCTGTCATGGATTTGTATTTTGGGTTGTATT TCTTAGTATATCACTGCAATTGTGTGAAAATGCTGTGTGTGTGTTTAACATGATTGTGCATGTAATTAACTTAATCAGGG GTTTAAGTGTATGTGATGTCCATTATAATTTGAATTTTTACATTATAGTTGATAGAAAATCAAGGTGGATTAGTTGATTC AAGAAAAGCCTCATGTCCAGAGTTATAAAGCGGTATATGAGAAAGAAACTTTGTAGAGG
CDS sequence (LotjaGi1g1v0583100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGAGTGTGGAGTTGAGTTGCAAGGAGGAGTAGATCTGCATGCAACAGAAACAGTTGACCCTGTTGTTGGTTTTGG CACCACCTTGGAGGAAGAAAGAGATATGTGGCTGAACACTACTGACCAAGATGATCTCTTAGGTGTAAACGATGCTACTG CTTCCATGTTCTACTCTGATTTCCCCTCTCTCCCTGATTTCTCATGCATGTCATCATCATCATCTTCTTCATCCTCAACA CCTGCACTTCCATTGAACAACATAGCATGCTCCACCACCACAACCTCCTCCTGTTCCTCCGCCTCTTCCTCTTCTGCCGC TTCGTGGGCGGTTCTGAAATCAGATGCTGATGTGGAAGAGAAAAACGGTTACATGCAGCAGCAGCATCAGCATCAACAGC AAGATCCGATAGATCATGCAATAACAAGAACACCGGTTACTGGGGCTTTGTCTTCAACTGCTTCCATGGAGATTTCACAA CAACAGCATGATCCTGTTATTGTTGGAGATTGCATGGATGGTGTGATGGAGATGGATACTTTTGGCTACATGGAGCTTTT AGAAGCCAATGAGTTTTTTGACCCTGCTTCCATTTTTCAGAATGAAGAGAATCCATTAGTGGAGTTCACACAGCAAGATC AACATCCACATGCAACGGTGTTGCAGAACATGGAATTATCTGCACCTTTTCAAGGGACAACAGAGGAGGATCAGATTCTT GAATCTGTTACTGCTACCAACAATAATGAGGAAGAAATTATCCAAAGAGAGGAAGAAGGTGGTATTGGTGGTGCAGATGA TGAAATGAGCATGGTGTTCTTGGAGTGGTTGAAGTCGAACAAGGATAGCGTCTCTGCCAATGACTTGAGAAACGTGAAGC TCAAGAGGGCAACCATAGAAAGCGCCGCGAGGCGATTGGGTGGAGGGAAAGAAGGGATGAAGCAATTGCTAAAGCTCATT CTTGAATGGGTTCAAACCAGCCATCTTCAGAATAAGAGGCGCAAGGACAATAACAACAACAACAATATTGCACTGCCACA ACAATTTCTGGATCCTTGTCAGAACCAGAACACTAATGGTAATTCATTTGCACCTGATCAATCAAACTCTTGTTTCAACC AGAGTACTACAACCTGGCTCTCTTCGCCACCGCAGCCGCCAACAAATGCTACTTTTGGAGCAGATCAAGCTCCTCTCATG GTGGCTCCGTTTTCACAACCCATGGTTGGATATGTGGGTGACCCTTACTCTGCTTCAAATAACCATAATAACCCTTACCA GCCTGCTGCTACTGAATACCACATGATGGAATCAACTCATCCATGGCCTGCTCATCCTAATTCTCAGTTCGCTGTTGCTT CTCACTATAATCAATCATTTGGGGACAACAGCCTTCTTCAACCAGCGGCGTTCGGAGGCTACGGTGGCAACCAGTATCCT TATCAGTTTTTTCATGGCCCTGGTGATAGGTTGATGAGATTAGGACCCTCGGCTACAAAAGAAGCGAGGAAGAAGAGGAT GGCGAGGCAGAGAAGGGTTTTGTCTCATCACAGGCATCATAATAATCACCATCAAAATCAAGCTTCTGACCCACATGCAA TGTTGGGAACTGATAATTGCACCGCTGTTATGGCTGCAAATCCGGCCAATTGGATGTACTGGCAGCAGACCATGGCACCA GTGGTACCGGCTGAGCCACCACAGGCGCAGCAACCAGCTCATCAGCCGGCAGAGCGGCCCTCCATGCAAACACAGAATAG TCATCAGGGCCGAGGCGCTGCGTCAGATAGGAGACAGGGTTGGAAGCCTGAGAAGAACTTGAGGTTCCTTCTGCAAAAGG TGTTGAAGCAAAGCGATGTGGGAAGTTTGGGGAGAATTGTTTTGCCAAAAAAAGAGGCAGAAACTCATTTGCCAGAACTG GAGGCAAGAGATGGAATTTCCATAACAATGGAAGACATTGGAACTTCTCGCGTTTGGAACATGCGCTACAGATACTGGCC AAACAACAAAAGTAGAATGTATTTGCTTGAGAACACTGGGGACTTTGTTAGAGCCAATGGACTCCAAGAGGGAGATTTCA TAGTGATATATTCAGATGTGAAGTGTGGCAAATTTATGATTAGAGGAGTGAAAGTGAGGCAACAGGGGTCAAAACCAGAG ACCAAGAAATCAGGAAAATCGCAGAAAAACCAGCAGAATGGGATCAATGCAGCAAATACAGCTGGAGCTGCTGTTGGTAA TAATGGCATACCATCTTCACAGAAGCAAAAAACAGAGAAGGGAGTAAATTAA
Protein sequence (LotjaGi1g1v0583100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMECGVELQGGVDLHATETVDPVVGFGTTLEEERDMWLNTTDQDDLLGVNDATASMFYSDFPSLPDFSCMSSSSSSSSST PALPLNNIACSTTTTSSCSSASSSSAASWAVLKSDADVEEKNGYMQQQHQHQQQDPIDHAITRTPVTGALSSTASMEISQ QQHDPVIVGDCMDGVMEMDTFGYMELLEANEFFDPASIFQNEENPLVEFTQQDQHPHATVLQNMELSAPFQGTTEEDQIL ESVTATNNNEEEIIQREEEGGIGGADDEMSMVFLEWLKSNKDSVSANDLRNVKLKRATIESAARRLGGGKEGMKQLLKLI LEWVQTSHLQNKRRKDNNNNNNIALPQQFLDPCQNQNTNGNSFAPDQSNSCFNQSTTTWLSSPPQPPTNATFGADQAPLM VAPFSQPMVGYVGDPYSASNNHNNPYQPAATEYHMMESTHPWPAHPNSQFAVASHYNQSFGDNSLLQPAAFGGYGGNQYP YQFFHGPGDRLMRLGPSATKEARKKRMARQRRVLSHHRHHNNHHQNQASDPHAMLGTDNCTAVMAANPANWMYWQQTMAP VVPAEPPQAQQPAHQPAERPSMQTQNSHQGRGAASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPEL EARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKFMIRGVKVRQQGSKPE TKKSGKSQKNQQNGINAANTAGAAVGNNGIPSSQKQKTEKGVN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 81 | 755 | 675 | 3.7E-185 | – | |
| PANTHER | 81 | 755 | 675 | 3.7E-185 | – | |
| MobiDBLite | 506 | 523 | 18 | - | – | |
| MobiDBLite | 506 | 534 | 29 | - | – | |
| MobiDBLite | 564 | 602 | 39 | - | – | |
| MobiDBLite | 574 | 593 | 20 | - | – | |
| Gene3D | 601 | 724 | 124 | 5.6E-33 | ||
| CDD | 609 | 710 | 102 | 7.93678E-37 | – | |
| SUPERFAMILY | 610 | 706 | 97 | 6.47E-24 | ||
| ProSiteProfiles | 611 | 713 | 103 | 11.335 | ||
| SMART | 611 | 711 | 101 | 6.1E-22 | ||
| Pfam | 612 | 708 | 97 | 3.7E-18 | ||
| MobiDBLite | 713 | 763 | 51 | - | – | |
| MobiDBLite | 726 | 763 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0583100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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