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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0589700 |
| Transcript ID | LotjaGi1g1v0589700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | B-cell receptor-associated protein 31-like; TAIR: AT3G07190.1 B-cell receptor-associated protein 31-like protein; Swiss-Prot: sp|Q54K74|YETL_DICDI Endoplasmic reticulum transmembrane protein YET-like; TrEMBL-Plants: tr|K7MSR4|K7MSR4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0589700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:112978154..112984180) extracted from Lotus japonicus Gifu genome v1.2.
ATCGTGCTCTTAAGTCTCTTACACAAACCTTGACTTCTTTCCCATTTCTTTTGACCATGGTCCATGGGATCCAAATCCGA CACACAGTGTAAAAGAAGCAAACCCATTTTTGGTGTCTTGCAGAGTTGCAGTAAATCTCAAACCCAAAACCCTTCCATTG ATTTCACACAGTTTCTCTTTTTCTACTTCACCCATCTCAACATTAGTTCTTTCCTACTCAGGCCTCAGGTCGTGAAAATT AGAGCCTCCCCTTCAAATTCATGCATGTGAAGGCTCAACCTTTCTTGCTAGATATCATTTTTTTTTTCAATTCCTTTACA ATCACTCACCTTGACTCAAGCCTCAGGTCAGTTTCAACAAAATGATAAAAAACGAGGGTTCTTCTCTCTGTTGAGTTCAA GGGTAGCTTTGTGTACTTGAAGAATGATTTTTTTTGTGGGGTGGATTTCATTTCTTGCTTTTTAGCTACAACAACCCCAC CCCATTTGGCAAAAGTAAGGATTTTTGGCAATTACAGGAAAAGGGTATTTTTTTTGGAAGAGAAAAAAAGGATGATTCAG TTGTTGTTCTTGGTGCTATTTGTTGAGGGTTTTGTGGCGTTTTTTTTGTTGGTGAAGATAGGGCCATTGAGAGATCTTGT GATGAAGAGTCTAGATCAGTTGAAGATGGGAAAGGGTCCTGCTACAGTGAAAACTATTGCTGGCACAATGTCTGTGATTC TCCTTTCAAGCCTTATGAGCATTGTTAAGATCCAGAACAAAGGTGCTAAGCTTGGTACAATGTCACCCATGGATCAAGTG CTGTGGAGAACTCACTTACTTGAAGCTTCACTCATGGGTGCGTTCATGCTCCTTTCATCTTGGTCATTTGCTTCCTTTCT ATTTTTAACTGCTAATAGGTTTTATGGGTTTTATTAGCTTTGAAGTTTGAAGCTCTTGCTGTGAAATTAATTGTGCAGAA TTGTTGATGTGCATTTTTTTTGCTTTACCCTTATTTTTATGAAGTTGACAAATTTGATTAGTGTCTGAGGCATTTTTCTA TAACTAAAATCAATAATTGAAGGTAACAACCTTTGGTTGTCCTTGTCCTTGAAGGCAAGCTTTTAAGTTATGGCTGCATT GTGGCCCCAATCACATTGTGGCTGTTGAAGCCTAATGCGAGATGCAACTGCTGCGATTTCGCAGCCACGTCAGGAGATAT GGTCCCTGATTTTGAAGTTTAAACCTTTCTTGGAAGATAACAAGATCATGTGCTAGGGTGTGTTGCAGGTCCTGTGGTGT TCTTAGTTTTTGTCATGCAATGAAACATGTACATATCATAGATTATAGATTGTAGAAGAACAGTGTTCTTCATATGATTT TCGTTATTGATGGTATCTTTCTCTATATGGTTCTGTCAGACTTTCTCTATATGGTTGTGTCTGATTCATAAAAAAGGGTC AAATTTATTCATTTCTTTGTAAAGTCGTTTGTTTGAGACCTAAGTTAAAAGTTTTTATGGTGTTATTTATCTAGTTTTAG AAAATTATATCTATTATCTCTTCAACCAAGGAAGAAACTCTATGGTCATTATTAAGTTGCCATTAGAAGACACATAAAAA GCTCCTTTGGTCTCACTAATCAGCCTAGTTCTTATTCTTTATTTTTCTCAATTCACTCAGTGTCGTAGTTGGTGCTCATG GCATTCCATGTGCATTATACTTGCATACCTTTAATTATTGATTTCAGATTATTCTGACAAAACATACCTTCATAAAATTT CATATTTATATGTCTGATAAACATGGCTCGTGAATTATGACTCTATTCTTTAAATTCGTTTTTTCATTGATCTTTTTTTA TTCTAACTATTTGATTCATGTGAGGTGAGCATTAAATTTTAACATTGCAAGCTCACAATTATTATTTTTCCAATAGAATT TCTGGATATGAGAACTTGCTTTTAAAAACAATGCTGTTAGGAGGGGAAGAGACTATATGGAGGGGAGTTCCTTAGCACAA ATTCATTATGGGACTCACTTGATAAAAAGCAGCCCACCCATGTCAATTTAGGCTTTCTAAATTGTGCTAATCAGGAATTT AATATACGGATATGGTTATTGACATGTCTAAGAAATCAATTAATTTGCCTTAAAGGATAGCAACTTGGCAAGCATAATGT TGAAGTATTGGAAAGAGGGTGTGAAGTAGTGTATAGTAATTGATGACCTGATATGAGCTCTTGCTGAATATAATTATATA TTTACATCATTCAATGTTGTTATTATCTCATGCTTCATGATCATCATGTTGGAGAGAGATCCACCCAGGACAAAACATTT AAAAATTCTGTATCGCGTAAAATGAATTTATGCCTTTCCATCTCCTAACATGATGACCATGTGATAGCAGACCAGTGATT AACGGAGTTTATGTTAGGAGAAGTGGGGATGGGCCAGTTGTGGTAGGGCCCAAATTAGCACATACATTGGCTAAATTGTT AGGGAATGGGCCAGCTTGTGATAAGGCCCAAATTAGCATGGATGTTTGTTAGTAATTAGTTAGTAACCAGAGACAGATAC ACGTTCAAGGTTATGAGAGCAAGTGCCCTCACTTAACTTTGGACATAATCATTAAAAAAAAATTAAATAGTAAAAATATG TGGTTTTTTATGTTTCTTTTGTTAAAATATCCCTCATTTGTGTCCCAAATTGTTAAATGCCCTCACTTGAGTAGTAAATG TATGATTTTTTATGGCCTCTTTGGTAAAAAAATGCTTTCATTGGTGTTCGCTTTGGTAAAAAATGTCATCACTTCTAATA GTATATGTAAATTTTTTTTTGTTGCGAATTATATGTATATATTGCCCTCACATCATTAAATTTCTGGATCCGTCACTGTT AGTAACTATACCTTATATAAGATACAACGGATATTATTAGGGTGTCTTTTTGCTGTCAGATATTGGCTTGTTAAGTTACT TCATGCCTCTGGAAGCGTGTTGGGGGTTCTTATATTCATCTCAGCCTCAATGTTCCCCAGTTAGAACTGTGTGATGCAAA GTCTTTTCCCTACATTGCCATCAACAAGAGTTTAGCTTCTAACATTGTGTTTTTTTTTTTAAAAAAAAAAAGCTTCTGAC ATTGTGAAATGTTGTAAAGGGTATTTTGGGTCCTTCTGCGATGGACTTCCCATCTGAAGCCGCTTCCTTTACTTCTCTTC GTTCACATAAGCGAGCACAGCCTGGGCTCACCTCTCATATTGTGCTCGATCAGTTTTTCCATCATTCCGGTTAACCATCG GACCTTGTCGAGTTTCTCTCAACAACATCTGTGTTTGTCTCTTCCATGCAGCTTTCAAGCTCCTTATTCAACACCATCTT CACTTCGCAACCAAGTTGCACTTTCTCTTCAAGAACCCTCTTCAAGGGTTTCATGCATCCATAGCTCCAAGGTTGGACCT CTGTACAGTTGGTACAGAAAATTGAAAAGAAGAATTATCTTTAGTGCAGAAAAAAGAGAAATACTCAGTTTTGTTCTGAC CCAGGAACAGTGAAACTGAGATGAAAACTCCACTAACAATTCAAGAGTCCTAGGGCCTGTTTGGTTGTGTTAGGATCTAA TTATTAGGGATTGAGATTTATTATATTTTTAGAGTCTATCTTAGGAGATTTTTATTTTGGGGTTGAGTTATCTTTTAGAT TTATAGTATCTTTTATATTAGGAGGATCATATATATCTTCTTTATGTCTTAGGGTTAAGTTTATGGTCATTAGGATTAGT TATCATAAATAGGAGTACAGTCAGTACACTCTTTAGGTTAGAGGCATGGAATTGAATTATTAACTTGTAAGGGAACCAGC CCTATTGGAGGAACCAACCTCTTGAGGATCCAGCCTCTTGGTTATTGTTTATCTTTTACTTTCCAGTTTTTTATAGTAAA AATACCAAAAAAGTTATCCTTAATCCTTATTTTTATATCTTTTCGCTGTTTAGATGGTTCAATGTATTGTATCTCTCTTG TAAAACATCTGAGTTCTAGTTGGATGTCCAAAAACTGAGTTTTTACCTACTGTCAACACCCGGGAAACCTAAGTTGTTTC TCTTCTGTTTCATCACTTTTTCCCAATACTACCTTTGATCCTATTTATCTGTGCCGAGAGAAAATAAAAAAATTGTTCCT ATATACATGTCCATTTAAAAGTTCAGCATAAAATTATCATTTTTTTCTCAATTACACCCTTATACTCACGTACTATTTTT CAAGTATAATAAATTACTTCACTATTGAGTAGTAGGCTAAATGATAAATAGGAGTTTATAAATGATATTAAGAAAAATAA GAACATTTATTGTATTTCTAAATCTGTATGTGTCTGAATGGATACATAACTAGGATAGGAGTTGAAGGTCGTAATTGACA GAATCAATACAAATTGCCTGCTGAATGTGCAAGACTTGATCATATTGACATAGGGAACTCTGTTTTCGTGTGGAATGTTT GGTTGACTTTGAATGTTTGAAAGGTTTTCTTTTCAAGGAAGTGCAAGAAGGAGTAAGAAAGAAGGGACAGATAAGCACCC ATGGTGTTTTGGTGGTCTGCTATATGATCATGTGTTCTATCAAGCTATTTTATTCTAAAAGTGCATAATTAGCCATGATA CTCACCCAGTCCTATCTATTTTTCCTTGACTTTTTACAGTTTGATACTGTGAGGAGATTTATTTTTCTTGACTAGCCCTA AGAGTTGTTTGGTTTTAGTAAACATGTTCTATTTTCATCAACAGTTACGCAAATCCCACCCTTTTTACTTTATTTCTTGT AATTCATGGAAAAATATTCAAACCATTGCTTTTAACATTGGATTCACGAATGAATTAAATTGATCCCGTCTTAAAATGAG TTAATTTGATCTTTCAGGTTTCACATTATTCCTTGGATTCCTAATTGACCGCATGCACCATTATCTTGAAAAGCTTGTCA CTTTAAGAAGTAATGCGGGAGCTTCGAAAGAAGAATTGGACAATCTGAAGAAAGAAACTTCCCTGCTTAAAGAAAAGGAG GAGAAAGCTTCCAAGGAGATGACAAAGCTGAAGGAAGAACTTACAATTCTGTCAGAAAGTTTGAAAAAGGCGAAGCTGGA ATCTGAAGAGAAGAACAAGAAAGTTGAAACTGCTGAAGCTCATGTTGCTTCCCTCCAGAAGCAAGCTGCTGATCTACTAC TTGAATATGACAGGCTCTTGGAAGAGAACCAAAATCTTCAGGCTCATACATTGGGACACAAGAATTGAGGGAACACTGGG ATAAAAAAAAAATTGTTGGTAGCAAAATCATCTTCTTCATGTTGGGGGAAAACTTGAAAAAAGGTTCAATTTTGGTCCTC CGTGGCAATACAAAATTGAACTCTGCTGCTCACGTTTACAAATTTTGCATATCTCTGTCAGCTTCTTCACCATTTTGTTA TTAAATCGCTGTTCAATGGCCCCATCTAGTGTCTTTGTTTGGATGGATATATTTTTAGGTCAAGGGGATTATTGGGAAAT TTAGAATAGTGTGTTGATTTAACGTACTTATTTCAGAAGCACAAGACTAATGAGATGTAGAAAGGAATTGCAGCTCGTAT GGAGAAAGTTTTTTTTGGCTACATTTAATGCTCGGTTTGGCAAGGCTTGGTACTCAAGTAGTAGCTTATTACTTTTTCTT ATTAAACTCTACTTACTTGAGGTAGCTTATATTTTGCTGTTTTTAAACCCAGAATCTGTTGGCGTTTGGAAATTCTCCAA ACCAACAAGGGCATTAACTTTGGTGGTTACAAGTATCTTCCATGGGAAGCAATCTTGTTCGAGTCGCAATAATTTTGGTG CCACCCATTTACATTATTATATCATCCCCAATTTTCGATTTTTCCCCAAACATAGGTGCATAAGGTATGGTTTGTATATA ATTCTATCCCATAGATGTAAGTGCGGTTAATTTGGGTGGTGAGAGAATGTGTGAAGATGGTACTAAAACTAATGCCCAAC CAACAAATCACTTGGGAAACTTGCGGT
CDS sequence (LotjaGi1g1v0589700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCAGTTGTTGTTCTTGGTGCTATTTGTTGAGGGTTTTGTGGCGTTTTTTTTGTTGGTGAAGATAGGGCCATTGAG AGATCTTGTGATGAAGAGTCTAGATCAGTTGAAGATGGGAAAGGGTCCTGCTACAGTGAAAACTATTGCTGGCACAATGT CTGTGATTCTCCTTTCAAGCCTTATGAGCATTGTTAAGATCCAGAACAAAGGTGCTAAGCTTGGTACAATGTCACCCATG GATCAAGTGCTGTGGAGAACTCACTTACTTGAAGCTTCACTCATGGGTTTCACATTATTCCTTGGATTCCTAATTGACCG CATGCACCATTATCTTGAAAAGCTTGTCACTTTAAGAAGTAATGCGGGAGCTTCGAAAGAAGAATTGGACAATCTGAAGA AAGAAACTTCCCTGCTTAAAGAAAAGGAGGAGAAAGCTTCCAAGGAGATGACAAAGCTGAAGGAAGAACTTACAATTCTG TCAGAAAGTTTGAAAAAGGCGAAGCTGGAATCTGAAGAGAAGAACAAGAAAGTTGAAACTGCTGAAGCTCATGTTGCTTC CCTCCAGAAGCAAGCTGCTGATCTACTACTTGAATATGACAGGCTCTTGGAAGAGAACCAAAATCTTCAGGCTCATACAT TGGGACACAAGAATTGA
Protein sequence (LotjaGi1g1v0589700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIQLLFLVLFVEGFVAFFLLVKIGPLRDLVMKSLDQLKMGKGPATVKTIAGTMSVILLSSLMSIVKIQNKGAKLGTMSPM DQVLWRTHLLEASLMGFTLFLGFLIDRMHHYLEKLVTLRSNAGASKEELDNLKKETSLLKEKEEKASKEMTKLKEELTIL SESLKKAKLESEEKNKKVETAEAHVASLQKQAADLLLEYDRLLEENQNLQAHTLGHKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 214 | 214 | 2.2E-111 | ||
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 1 | 214 | 214 | 2.2E-111 | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| Phobius | 6 | 23 | 18 | - | – | |
| Phobius | 24 | 43 | 20 | - | – | |
| Phobius | 44 | 65 | 22 | - | – | |
| TMHMM | 46 | 68 | 23 | - | – | |
| Phobius | 66 | 84 | 19 | - | – | |
| TMHMM | 83 | 105 | 23 | - | – | |
| Phobius | 85 | 105 | 21 | - | – | |
| Phobius | 106 | 218 | 113 | - | – | |
| Coils | 115 | 212 | 98 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi1g1v0589700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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